Experiment: NL-CCM_agar
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06098 and MPMX19_06099 are separated by 21 nucleotides MPMX19_06099 and MPMX19_06100 are separated by 168 nucleotides
MPMX19_06098: MPMX19_06098 - Transcriptional regulatory protein TyrR, at 279,325 to 280,854
_06098
MPMX19_06099: MPMX19_06099 - hypothetical protein, at 280,876 to 281,685
_06099
MPMX19_06100: MPMX19_06100 - Electron transfer flavoprotein-ubiquinone oxidoreductase, at 281,854 to 283,503
_06100
Position (kb) 280
281
282 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 280.135 kb on + strand, within MPMX19_06098 at 280.135 kb on + strand, within MPMX19_06098 at 280.243 kb on + strand, within MPMX19_06098 at 280.243 kb on + strand, within MPMX19_06098 at 280.243 kb on + strand, within MPMX19_06098 at 280.244 kb on - strand, within MPMX19_06098 at 280.244 kb on - strand, within MPMX19_06098 at 280.244 kb on - strand, within MPMX19_06098 at 280.377 kb on + strand, within MPMX19_06098 at 280.377 kb on + strand, within MPMX19_06098 at 280.377 kb on + strand, within MPMX19_06098 at 280.377 kb on + strand, within MPMX19_06098 at 280.377 kb on + strand, within MPMX19_06098 at 280.377 kb on + strand, within MPMX19_06098 at 280.377 kb on + strand, within MPMX19_06098 at 280.377 kb on + strand, within MPMX19_06098 at 280.377 kb on + strand, within MPMX19_06098 at 280.378 kb on - strand, within MPMX19_06098 at 280.378 kb on - strand, within MPMX19_06098 at 280.378 kb on - strand, within MPMX19_06098 at 280.378 kb on - strand, within MPMX19_06098 at 280.378 kb on - strand, within MPMX19_06098 at 280.378 kb on - strand, within MPMX19_06098 at 280.378 kb on - strand, within MPMX19_06098 at 280.378 kb on - strand, within MPMX19_06098 at 280.378 kb on - strand, within MPMX19_06098 at 280.378 kb on - strand, within MPMX19_06098 at 280.378 kb on - strand, within MPMX19_06098 at 280.378 kb on - strand, within MPMX19_06098 at 280.399 kb on + strand, within MPMX19_06098 at 280.399 kb on + strand, within MPMX19_06098 at 280.399 kb on + strand, within MPMX19_06098 at 280.399 kb on + strand, within MPMX19_06098 at 280.399 kb on + strand, within MPMX19_06098 at 280.399 kb on + strand, within MPMX19_06098 at 280.400 kb on - strand, within MPMX19_06098 at 280.834 kb on + strand at 280.834 kb on + strand at 280.834 kb on + strand at 280.834 kb on + strand at 280.834 kb on + strand at 280.835 kb on - strand at 280.835 kb on - strand at 281.151 kb on + strand, within MPMX19_06099 at 281.151 kb on + strand, within MPMX19_06099 at 281.151 kb on + strand, within MPMX19_06099 at 281.151 kb on + strand, within MPMX19_06099 at 281.151 kb on + strand, within MPMX19_06099 at 281.151 kb on + strand, within MPMX19_06099 at 281.151 kb on + strand, within MPMX19_06099 at 281.151 kb on + strand, within MPMX19_06099 at 281.151 kb on + strand, within MPMX19_06099 at 281.151 kb on + strand, within MPMX19_06099 at 281.151 kb on + strand, within MPMX19_06099 at 281.151 kb on + strand, within MPMX19_06099 at 281.152 kb on - strand, within MPMX19_06099 at 281.152 kb on - strand, within MPMX19_06099 at 281.152 kb on - strand, within MPMX19_06099 at 281.152 kb on - strand, within MPMX19_06099 at 281.152 kb on - strand, within MPMX19_06099 at 281.152 kb on - strand, within MPMX19_06099 at 281.152 kb on - strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.366 kb on + strand, within MPMX19_06099 at 281.366 kb on + strand, within MPMX19_06099 at 281.367 kb on - strand, within MPMX19_06099 at 281.367 kb on - strand, within MPMX19_06099 at 281.367 kb on - strand, within MPMX19_06099 at 281.367 kb on - strand, within MPMX19_06099 at 281.649 kb on + strand at 281.649 kb on + strand at 281.649 kb on + strand at 281.649 kb on + strand at 281.649 kb on + strand at 281.649 kb on + strand at 281.650 kb on - strand at 281.650 kb on - strand at 281.650 kb on - strand at 281.650 kb on - strand at 281.650 kb on - strand at 281.650 kb on - strand at 281.650 kb on - strand at 281.651 kb on + strand at 281.651 kb on + strand at 281.651 kb on + strand at 281.651 kb on + strand at 281.651 kb on + strand at 281.651 kb on + strand at 281.652 kb on - strand at 281.652 kb on - strand at 281.717 kb on + strand at 281.717 kb on + strand at 281.718 kb on - strand at 281.718 kb on - strand at 281.718 kb on - strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.723 kb on + strand at 281.723 kb on + strand at 281.723 kb on + strand at 281.723 kb on + strand at 281.723 kb on + strand at 281.723 kb on + strand at 281.723 kb on + strand at 281.723 kb on + strand at 281.723 kb on + strand at 281.723 kb on + strand at 281.723 kb on + strand at 281.723 kb on + strand at 281.724 kb on - strand at 281.724 kb on - strand at 281.724 kb on - strand at 281.724 kb on - strand at 281.724 kb on - strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM_agar remove 280,135 + MPMX19_06098 0.53 +0.3 280,135 + MPMX19_06098 0.53 -1.6 280,243 + MPMX19_06098 0.60 +0.7 280,243 + MPMX19_06098 0.60 -0.5 280,243 + MPMX19_06098 0.60 -0.1 280,244 - MPMX19_06098 0.60 -0.8 280,244 - MPMX19_06098 0.60 +1.8 280,244 - MPMX19_06098 0.60 -0.6 280,377 + MPMX19_06098 0.69 +0.1 280,377 + MPMX19_06098 0.69 +1.3 280,377 + MPMX19_06098 0.69 -0.2 280,377 + MPMX19_06098 0.69 -0.7 280,377 + MPMX19_06098 0.69 -1.0 280,377 + MPMX19_06098 0.69 -0.7 280,377 + MPMX19_06098 0.69 +0.8 280,377 + MPMX19_06098 0.69 +0.1 280,377 + MPMX19_06098 0.69 -0.1 280,378 - MPMX19_06098 0.69 -0.7 280,378 - MPMX19_06098 0.69 -0.7 280,378 - MPMX19_06098 0.69 +0.2 280,378 - MPMX19_06098 0.69 -0.9 280,378 - MPMX19_06098 0.69 +0.1 280,378 - MPMX19_06098 0.69 +0.5 280,378 - MPMX19_06098 0.69 +0.6 280,378 - MPMX19_06098 0.69 -0.8 280,378 - MPMX19_06098 0.69 +0.3 280,378 - MPMX19_06098 0.69 -0.5 280,378 - MPMX19_06098 0.69 -1.7 280,378 - MPMX19_06098 0.69 +1.2 280,399 + MPMX19_06098 0.70 +0.1 280,399 + MPMX19_06098 0.70 -1.0 280,399 + MPMX19_06098 0.70 +0.1 280,399 + MPMX19_06098 0.70 -0.6 280,399 + MPMX19_06098 0.70 -0.3 280,399 + MPMX19_06098 0.70 -0.7 280,400 - MPMX19_06098 0.70 -1.0 280,834 + +0.9 280,834 + -0.6 280,834 + -0.2 280,834 + -2.2 280,834 + -2.2 280,835 - -0.7 280,835 - -0.7 281,151 + MPMX19_06099 0.34 -1.7 281,151 + MPMX19_06099 0.34 -1.4 281,151 + MPMX19_06099 0.34 +0.1 281,151 + MPMX19_06099 0.34 -2.0 281,151 + MPMX19_06099 0.34 -1.1 281,151 + MPMX19_06099 0.34 -1.1 281,151 + MPMX19_06099 0.34 +0.4 281,151 + MPMX19_06099 0.34 -1.1 281,151 + MPMX19_06099 0.34 -1.0 281,151 + MPMX19_06099 0.34 -1.6 281,151 + MPMX19_06099 0.34 -1.1 281,151 + MPMX19_06099 0.34 +0.6 281,152 - MPMX19_06099 0.34 -0.6 281,152 - MPMX19_06099 0.34 -0.4 281,152 - MPMX19_06099 0.34 -1.0 281,152 - MPMX19_06099 0.34 -1.7 281,152 - MPMX19_06099 0.34 -1.6 281,152 - MPMX19_06099 0.34 -0.1 281,152 - MPMX19_06099 0.34 -2.2 281,315 + MPMX19_06099 0.54 -0.3 281,315 + MPMX19_06099 0.54 -0.2 281,315 + MPMX19_06099 0.54 -2.7 281,315 + MPMX19_06099 0.54 -1.9 281,315 + MPMX19_06099 0.54 -0.4 281,315 + MPMX19_06099 0.54 -0.2 281,315 + MPMX19_06099 0.54 -2.7 281,315 + MPMX19_06099 0.54 -2.1 281,315 + MPMX19_06099 0.54 -0.7 281,315 + MPMX19_06099 0.54 -1.0 281,315 + MPMX19_06099 0.54 -1.5 281,315 + MPMX19_06099 0.54 -1.5 281,315 + MPMX19_06099 0.54 -0.3 281,315 + MPMX19_06099 0.54 -0.7 281,315 + MPMX19_06099 0.54 -0.7 281,316 - MPMX19_06099 0.54 -1.4 281,316 - MPMX19_06099 0.54 -0.8 281,316 - MPMX19_06099 0.54 -2.8 281,316 - MPMX19_06099 0.54 -2.4 281,316 - MPMX19_06099 0.54 -0.8 281,316 - MPMX19_06099 0.54 -1.4 281,316 - MPMX19_06099 0.54 -1.4 281,316 - MPMX19_06099 0.54 -0.1 281,316 - MPMX19_06099 0.54 -0.6 281,316 - MPMX19_06099 0.54 +1.1 281,316 - MPMX19_06099 0.54 -1.8 281,316 - MPMX19_06099 0.54 -1.2 281,316 - MPMX19_06099 0.54 -0.8 281,366 + MPMX19_06099 0.60 +0.6 281,366 + MPMX19_06099 0.60 -0.7 281,367 - MPMX19_06099 0.61 -1.8 281,367 - MPMX19_06099 0.61 -0.8 281,367 - MPMX19_06099 0.61 -1.9 281,367 - MPMX19_06099 0.61 -2.2 281,649 + -0.9 281,649 + -0.4 281,649 + -1.4 281,649 + -0.2 281,649 + -1.1 281,649 + -1.9 281,650 - +0.1 281,650 - -0.8 281,650 - -1.3 281,650 - -2.2 281,650 - -0.5 281,650 - -0.9 281,650 - -1.2 281,651 + -0.4 281,651 + -1.3 281,651 + -1.0 281,651 + -0.9 281,651 + -1.9 281,651 + -2.0 281,652 - -1.0 281,652 - -0.2 281,717 + +0.3 281,717 + -2.2 281,718 - -1.4 281,718 - -0.7 281,718 - -0.6 281,719 + -0.7 281,719 + -0.7 281,719 + -1.0 281,719 + +0.3 281,719 + -0.8 281,719 + -0.4 281,719 + -1.8 281,719 + -0.9 281,719 + -0.5 281,719 + -1.7 281,719 + -0.9 281,719 + -0.9 281,719 + -0.5 281,719 + -0.7 281,719 + +0.0 281,719 + -1.2 281,719 + -2.2 281,719 + -1.8 281,719 + -0.2 281,719 + -2.1 281,719 + -1.3 281,719 + -1.9 281,719 + -2.5 281,719 + -2.0 281,719 + -0.1 281,719 + +0.3 281,719 + -0.8 281,719 + -1.5 281,719 + +0.4 281,720 - -0.7 281,720 - -0.4 281,720 - +0.6 281,720 - +0.6 281,720 - -0.4 281,720 - +0.1 281,720 - -0.4 281,720 - -1.2 281,720 - +1.3 281,720 - -0.3 281,720 - -0.2 281,720 - -0.4 281,720 - -1.7 281,720 - -0.2 281,720 - -0.6 281,720 - -1.2 281,720 - -0.3 281,720 - +0.1 281,720 - -0.7 281,720 - +0.1 281,720 - +0.5 281,720 - +0.0 281,720 - +0.7 281,720 - -0.5 281,720 - +0.7 281,720 - -0.6 281,720 - -0.6 281,723 + -0.5 281,723 + -0.7 281,723 + -0.5 281,723 + -1.1 281,723 + -0.9 281,723 + -1.7 281,723 + -1.9 281,723 + -0.8 281,723 + -1.1 281,723 + +0.7 281,723 + -2.3 281,723 + -1.7 281,724 - +0.6 281,724 - -0.4 281,724 - +1.1 281,724 - +0.9 281,724 - -0.7 281,855 + +0.5 281,855 + -0.9 281,855 + +0.0 281,855 + -2.3 281,855 + +0.2 281,855 + -0.4 281,855 + -0.6 281,855 + +0.5 281,855 + -0.4 281,855 + -1.3 281,855 + -0.6 281,855 + -0.3 281,855 + -0.6 281,855 + +0.9 281,855 + -2.2 281,855 + -0.9 281,855 + -2.5 281,855 + +1.4 281,855 + -0.8 281,855 + +0.5 281,855 + +0.1 281,855 + -0.6 281,856 - -2.3 281,856 - -0.3 281,856 - -0.9 281,856 - -1.1 281,856 - +0.6 281,856 - -0.5 281,856 - -1.8 281,856 - -0.3 281,856 - -0.2 281,856 - -1.1 281,856 - -0.1 281,856 - -0.3 281,856 - +0.6 281,856 - -1.4 281,856 - -0.4 281,856 - -0.7 281,856 - -0.7 281,856 - -0.8 281,856 - -1.2 281,856 - -0.2 281,856 - -1.7
Or see this region's nucleotide sequence