Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04623

Experiment: NL-CCM_agar

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM_agar
1,012,944	+		MPMX19_04622	0.20	-1.6
1,012,944	+		MPMX19_04622	0.20	+0.6
1,012,944	+		MPMX19_04622	0.20	-0.7
1,012,945	-		MPMX19_04622	0.20	-1.3
1,012,945	-		MPMX19_04622	0.20	-1.7
1,012,945	-		MPMX19_04622	0.20	-0.4
1,012,945	-		MPMX19_04622	0.20	-1.3
1,012,945	-		MPMX19_04622	0.20	-0.6
1,012,945	-		MPMX19_04622	0.20	-1.2
1,012,998	+		MPMX19_04622	0.26	-0.6
1,012,998	+		MPMX19_04622	0.26	-0.4
1,012,998	+		MPMX19_04622	0.26	-0.7
1,012,998	+		MPMX19_04622	0.26	+0.6
1,012,998	+		MPMX19_04622	0.26	-2.0
1,012,998	+		MPMX19_04622	0.26	+0.6
1,012,998	+		MPMX19_04622	0.26	+1.2
1,012,998	+		MPMX19_04622	0.26	-0.7
1,012,998	+		MPMX19_04622	0.26	-1.1
1,012,998	+		MPMX19_04622	0.26	-1.4
1,012,999	-		MPMX19_04622	0.26	-0.7
1,012,999	-		MPMX19_04622	0.26	-1.0
1,012,999	-		MPMX19_04622	0.26	-1.3
1,012,999	-		MPMX19_04622	0.26	-1.4
1,012,999	-		MPMX19_04622	0.26	-1.1
1,012,999	-		MPMX19_04622	0.26	-1.4
1,012,999	-		MPMX19_04622	0.26	-1.9
1,012,999	-		MPMX19_04622	0.26	-1.2
1,012,999	-		MPMX19_04622	0.26	+0.0
1,012,999	-		MPMX19_04622	0.26	-0.5
1,012,999	-		MPMX19_04622	0.26	-2.0
1,012,999	-		MPMX19_04622	0.26	+0.6
1,012,999	-		MPMX19_04622	0.26	+0.4
1,012,999	-		MPMX19_04622	0.26	+0.9
1,013,022	+		MPMX19_04622	0.28	-0.1
1,013,022	+		MPMX19_04622	0.28	-1.6
1,013,022	+		MPMX19_04622	0.28	-1.8
1,013,022	+		MPMX19_04622	0.28	-0.6
1,013,023	-		MPMX19_04622	0.28	-0.3
1,013,023	-		MPMX19_04622	0.28	-1.0
1,013,023	-		MPMX19_04622	0.28	-1.7
1,013,023	-		MPMX19_04622	0.28	-1.0
1,013,055	+		MPMX19_04622	0.31	-1.6
1,013,056	-		MPMX19_04622	0.31	-1.7
1,013,220	+		MPMX19_04622	0.47	+0.9
1,013,220	+		MPMX19_04622	0.47	-0.1
1,013,220	+		MPMX19_04622	0.47	-1.4
1,013,220	+		MPMX19_04622	0.47	-1.7
1,013,220	+		MPMX19_04622	0.47	-0.6
1,013,220	+		MPMX19_04622	0.47	-1.0
1,013,220	+		MPMX19_04622	0.47	-1.4
1,013,220	+		MPMX19_04622	0.47	-2.2
1,013,220	+		MPMX19_04622	0.47	-2.1
1,013,220	+		MPMX19_04622	0.47	-0.4
1,013,220	+		MPMX19_04622	0.47	-2.0
1,013,220	+		MPMX19_04622	0.47	-0.2
1,013,220	+		MPMX19_04622	0.47	-1.4
1,013,220	+		MPMX19_04622	0.47	+0.3
1,013,221	-		MPMX19_04622	0.47	-0.5
1,013,221	-		MPMX19_04622	0.47	-0.7
1,013,221	-		MPMX19_04622	0.47	-0.2
1,013,221	-		MPMX19_04622	0.47	-1.4
1,013,221	-		MPMX19_04622	0.47	+0.0
1,013,221	-		MPMX19_04622	0.47	-0.4
1,013,221	-		MPMX19_04622	0.47	-1.4
1,013,221	-		MPMX19_04622	0.47	-1.2
1,013,332	+		MPMX19_04622	0.58	+1.6
1,013,332	+		MPMX19_04622	0.58	-2.1
1,013,332	+		MPMX19_04622	0.58	-0.7
1,013,333	-		MPMX19_04622	0.58	-1.0
1,013,333	-		MPMX19_04622	0.58	+1.0
1,013,333	-		MPMX19_04622	0.58	+0.3
1,013,333	-		MPMX19_04622	0.58	-1.2
1,013,333	-		MPMX19_04622	0.58	-1.0
1,013,333	-		MPMX19_04622	0.58	+0.3
1,013,957	+		MPMX19_04623	0.17	-1.8
1,013,957	+		MPMX19_04623	0.17	-2.0
1,013,957	+		MPMX19_04623	0.17	-0.7
1,013,958	-		MPMX19_04623	0.17	-2.2
1,013,958	-		MPMX19_04623	0.17	-0.7
1,013,958	-		MPMX19_04623	0.17	-0.7
1,013,958	-		MPMX19_04623	0.17	-1.6
1,013,958	-		MPMX19_04623	0.17	-2.2
1,014,135	+		MPMX19_04623	0.33	-2.2
1,014,135	+		MPMX19_04623	0.33	+0.6
1,014,136	-		MPMX19_04623	0.33	-0.9
1,014,136	-		MPMX19_04623	0.33	-0.2
1,014,485	+		MPMX19_04623	0.63	-1.0
1,014,485	+		MPMX19_04623	0.63	+1.1
1,014,485	+		MPMX19_04623	0.63	-1.4
1,014,485	+		MPMX19_04623	0.63	+0.4
1,014,485	+		MPMX19_04623	0.63	-0.6
1,014,486	-		MPMX19_04623	0.63	+0.2
1,014,486	-		MPMX19_04623	0.63	-1.4
1,014,609	-		MPMX19_04623	0.73	-1.4
1,014,644	+		MPMX19_04623	0.77	-1.0
1,015,030	+				-1.6
1,015,030	+				-0.2
1,015,030	+				+0.6
1,015,030	+				-0.7
1,015,031	-				-0.2
1,015,031	-				-0.7
1,015,031	-				-0.2
1,015,138	+				-1.2
1,015,138	+				-0.3
1,015,138	+				+0.4
1,015,138	+				-2.1
1,015,138	+				+1.6
1,015,139	-				-2.6
1,015,321	+		MPMX19_04624	0.15	-0.6
1,015,321	+		MPMX19_04624	0.15	-0.2
1,015,321	+		MPMX19_04624	0.15	-0.1
1,015,321	+		MPMX19_04624	0.15	-0.3
1,015,321	+		MPMX19_04624	0.15	-1.5
1,015,321	+		MPMX19_04624	0.15	-1.1
1,015,321	+		MPMX19_04624	0.15	-0.7
1,015,321	+		MPMX19_04624	0.15	+0.9
1,015,321	+		MPMX19_04624	0.15	-1.6
1,015,321	+		MPMX19_04624	0.15	-0.4
1,015,321	+		MPMX19_04624	0.15	+0.0
1,015,321	+		MPMX19_04624	0.15	-1.7
1,015,321	+		MPMX19_04624	0.15	-0.4
1,015,321	+		MPMX19_04624	0.15	-1.0
1,015,321	+		MPMX19_04624	0.15	-2.0
1,015,322	-		MPMX19_04624	0.15	-0.2
1,015,322	-		MPMX19_04624	0.15	-1.1
1,015,322	-		MPMX19_04624	0.15	-0.4
1,015,322	-		MPMX19_04624	0.15	-0.7
1,015,322	-		MPMX19_04624	0.15	-1.7
1,015,322	-		MPMX19_04624	0.15	-1.4
1,015,322	-		MPMX19_04624	0.15	-1.6
1,015,322	-		MPMX19_04624	0.15	-2.0
1,015,322	-		MPMX19_04624	0.15	-1.8
1,015,322	-		MPMX19_04624	0.15	-0.6
1,015,322	-		MPMX19_04624	0.15	-1.4
1,015,322	-		MPMX19_04624	0.15	-2.7
1,015,322	-		MPMX19_04624	0.15	-0.7
1,015,330	+		MPMX19_04624	0.16	+0.4
1,015,331	-		MPMX19_04624	0.16	+0.0
1,015,331	-		MPMX19_04624	0.16	-1.7
1,015,610	-		MPMX19_04624	0.26	+0.7
1,015,699	+		MPMX19_04624	0.29	-2.6
1,015,700	-		MPMX19_04624	0.29	-0.8
1,015,732	+		MPMX19_04624	0.31	-1.2
1,015,732	+		MPMX19_04624	0.31	-0.2
1,015,733	-		MPMX19_04624	0.31	-0.3
1,015,733	-		MPMX19_04624	0.31	+0.2