Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01046

Experiment: NL-CCM_agar

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM_agar
1,085,858	+		MPMX19_01045	0.65	+0.2
1,085,859	-		MPMX19_01045	0.65	+0.6
1,085,859	-		MPMX19_01045	0.65	+0.5
1,085,859	-		MPMX19_01045	0.65	+0.1
1,085,859	-		MPMX19_01045	0.65	+0.3
1,085,860	+		MPMX19_01045	0.65	+0.7
1,085,860	+		MPMX19_01045	0.65	+0.2
1,085,860	+		MPMX19_01045	0.65	+1.4
1,085,860	+		MPMX19_01045	0.65	+0.7
1,085,860	+		MPMX19_01045	0.65	+0.6
1,085,860	+		MPMX19_01045	0.65	+0.6
1,085,860	+		MPMX19_01045	0.65	+1.6
1,085,860	+		MPMX19_01045	0.65	+0.5
1,085,860	+		MPMX19_01045	0.65	-0.2
1,085,860	+		MPMX19_01045	0.65	+0.5
1,085,860	+		MPMX19_01045	0.65	+1.5
1,085,860	+		MPMX19_01045	0.65	-1.8
1,085,860	+		MPMX19_01045	0.65	+0.3
1,085,860	+		MPMX19_01045	0.65	-0.1
1,085,860	+		MPMX19_01045	0.65	+1.6
1,085,860	+		MPMX19_01045	0.65	+0.6
1,085,861	-		MPMX19_01045	0.65	+0.8
1,085,861	-		MPMX19_01045	0.65	+0.6
1,085,861	-		MPMX19_01045	0.65	+0.2
1,085,861	-		MPMX19_01045	0.65	+0.0
1,085,861	-		MPMX19_01045	0.65	-0.3
1,085,861	-		MPMX19_01045	0.65	+0.7
1,085,861	-		MPMX19_01045	0.65	-0.8
1,085,861	-		MPMX19_01045	0.65	+1.5
1,085,861	-		MPMX19_01045	0.65	+1.1
1,085,861	-		MPMX19_01045	0.65	+2.1
1,085,861	-		MPMX19_01045	0.65	+0.6
1,085,861	-		MPMX19_01045	0.65	+0.6
1,085,992	+		MPMX19_01045	0.75	+0.9
1,085,992	+		MPMX19_01045	0.75	+0.8
1,085,992	+		MPMX19_01045	0.75	+0.5
1,085,992	+		MPMX19_01045	0.75	+1.8
1,085,993	-		MPMX19_01045	0.75	+0.5
1,085,993	-		MPMX19_01045	0.75	+1.3
1,085,993	-		MPMX19_01045	0.75	+0.5
1,085,993	-		MPMX19_01045	0.75	+0.6
1,086,004	+		MPMX19_01045	0.76	-1.2
1,086,004	+		MPMX19_01045	0.76	+0.9
1,086,004	+		MPMX19_01045	0.76	-0.8
1,086,004	+		MPMX19_01045	0.76	+1.2
1,086,004	+		MPMX19_01045	0.76	+0.6
1,086,005	-		MPMX19_01045	0.76	+1.1
1,086,005	-		MPMX19_01045	0.76	+0.4
1,086,005	-		MPMX19_01045	0.76	-0.1
1,086,005	-		MPMX19_01045	0.76	-0.4
1,086,005	-		MPMX19_01045	0.76	-0.6
1,086,005	-		MPMX19_01045	0.76	-0.4
1,086,067	+		MPMX19_01045	0.80	-0.5
1,086,067	+		MPMX19_01045	0.80	+0.1
1,086,067	+		MPMX19_01045	0.80	+1.2
1,086,067	+		MPMX19_01045	0.80	-0.1
1,086,067	+		MPMX19_01045	0.80	-1.3
1,086,067	+		MPMX19_01045	0.80	-0.5
1,086,067	+		MPMX19_01045	0.80	-1.1
1,086,067	+		MPMX19_01045	0.80	+0.2
1,086,068	-		MPMX19_01045	0.80	+0.8
1,086,068	-		MPMX19_01045	0.80	-1.3
1,086,068	-		MPMX19_01045	0.80	-0.5
1,086,068	-		MPMX19_01045	0.80	+0.2
1,086,068	-		MPMX19_01045	0.80	+0.3
1,086,068	-		MPMX19_01045	0.80	+0.0
1,086,068	-		MPMX19_01045	0.80	+0.2
1,086,068	-		MPMX19_01045	0.80	+1.4
1,086,190	+		MPMX19_01045	0.89	+0.0
1,086,191	-		MPMX19_01045	0.89	+0.1
1,086,196	+		MPMX19_01045	0.90	+0.9
1,086,196	+		MPMX19_01045	0.90	-0.5
1,086,196	+		MPMX19_01045	0.90	+0.9
1,086,196	+		MPMX19_01045	0.90	+1.8
1,086,196	+		MPMX19_01045	0.90	-0.3
1,086,196	+		MPMX19_01045	0.90	+0.5
1,086,196	+		MPMX19_01045	0.90	+1.5
1,086,196	+		MPMX19_01045	0.90	+0.1
1,086,196	+		MPMX19_01045	0.90	+0.0
1,086,196	+		MPMX19_01045	0.90	+1.1
1,086,196	+		MPMX19_01045	0.90	+1.7
1,086,197	-		MPMX19_01045	0.90	-0.5
1,086,197	-		MPMX19_01045	0.90	+0.2
1,086,197	-		MPMX19_01045	0.90	+0.2
1,086,197	-		MPMX19_01045	0.90	-1.6
1,086,197	-		MPMX19_01045	0.90	-1.2
1,086,197	-		MPMX19_01045	0.90	+0.8
1,086,197	-		MPMX19_01045	0.90	+0.7
1,086,197	-		MPMX19_01045	0.90	-2.2
1,086,235	+				-0.1
1,086,235	+				-0.5
1,086,235	+				-1.5
1,086,235	+				+0.8
1,086,236	-				+0.3
1,086,236	-				-1.2
1,086,236	-				+0.6
1,086,369	-				-0.2
1,086,369	-				-2.1
1,086,463	-				-1.7
1,086,463	-				+0.3
1,086,566	+				-0.2
1,086,566	+				-0.5
1,086,567	-				+0.4
1,086,626	-				+0.9
1,086,639	+				+1.5
1,086,639	+				-2.4
1,086,639	+				-0.2
1,086,639	+				+0.3
1,086,639	+				+0.7
1,086,639	+				-0.7
1,086,639	+				+0.0
1,086,639	+				-0.9
1,086,639	+				-1.7
1,086,639	+				+0.2
1,086,640	-				-1.7
1,086,640	-				+1.1
1,086,640	-				-1.2
1,086,640	-				-0.5
1,086,640	-				-0.6
1,086,640	-				-1.4
1,086,640	-				-1.1
1,087,240	+		MPMX19_01046	0.62	+0.3
1,087,240	+		MPMX19_01046	0.62	-0.6
1,087,240	+		MPMX19_01046	0.62	-0.6
1,087,240	+		MPMX19_01046	0.62	-0.2
1,087,240	+		MPMX19_01046	0.62	-0.5
1,087,240	+		MPMX19_01046	0.62	+1.3
1,087,240	+		MPMX19_01046	0.62	-0.4
1,087,240	+		MPMX19_01046	0.62	-1.5
1,087,240	+		MPMX19_01046	0.62	-0.7
1,087,240	+		MPMX19_01046	0.62	+0.2
1,087,240	+		MPMX19_01046	0.62	-2.9
1,087,240	+		MPMX19_01046	0.62	-1.1
1,087,240	+		MPMX19_01046	0.62	+0.3
1,087,240	+		MPMX19_01046	0.62	+1.0
1,087,240	+		MPMX19_01046	0.62	-2.6
1,087,240	+		MPMX19_01046	0.62	-1.1
1,087,240	+		MPMX19_01046	0.62	+0.1
1,087,240	+		MPMX19_01046	0.62	-0.6
1,087,240	+		MPMX19_01046	0.62	+0.2
1,087,240	+		MPMX19_01046	0.62	-0.3
1,087,240	+		MPMX19_01046	0.62	+0.0
1,087,240	+		MPMX19_01046	0.62	-0.5
1,087,276	+		MPMX19_01046	0.66	+0.0
1,087,276	+		MPMX19_01046	0.66	-0.4
1,087,276	+		MPMX19_01046	0.66	-0.5
1,087,276	+		MPMX19_01046	0.66	-0.2
1,087,276	+		MPMX19_01046	0.66	-0.1
1,087,276	+		MPMX19_01046	0.66	+0.3
1,087,276	+		MPMX19_01046	0.66	-1.3
1,087,277	-		MPMX19_01046	0.66	-0.2
1,087,277	-		MPMX19_01046	0.66	-0.6
1,087,277	-		MPMX19_01046	0.66	-1.1
1,087,277	-		MPMX19_01046	0.66	-0.7
1,087,277	-		MPMX19_01046	0.66	-0.7
1,087,531	+				+0.5
1,087,532	-				-1.2
1,087,659	+				-0.8
1,087,659	+				-2.0
1,087,659	+				+0.1
1,087,659	+				+1.2
1,087,660	-				-0.6
1,087,660	-				+1.1
1,087,660	-				-0.2
1,087,660	-				+0.2
1,087,692	+				+0.0
1,087,692	+				-1.7
1,087,693	-				-0.4
1,087,693	-				-0.4
1,087,743	+				+0.2
1,087,743	+				-1.3
1,087,743	+				-1.3
1,087,743	+				-1.3
1,087,743	+				-0.0
1,087,744	-				+0.6
1,087,744	-				-0.6
1,087,744	-				+0.5
1,087,761	-				+0.5
1,087,761	-				+0.7
1,087,776	+				+0.3
1,087,776	+				-0.5
1,087,776	+				+0.3
1,087,776	+				+0.3
1,087,776	+				-0.9
1,087,787	+				-0.8
1,087,788	-				+0.3
1,087,788	-				+0.6
1,087,852	+				-0.1
1,087,852	+				+1.3
1,087,852	+				-0.8
1,087,853	-				+0.9
1,087,854	+				+0.3
1,087,854	+				+0.2
1,087,906	+				+0.2
1,087,907	-				+0.1
1,087,936	-				+0.2
1,087,936	-				-0.8
1,087,974	+				-0.4
1,087,974	+				-0.1
1,087,974	+				-1.2
1,087,975	-				+1.8
1,087,975	-				+1.5
1,087,975	-				+0.3
1,087,975	-				-0.3
1,087,995	+				+0.4
1,088,061	+				-0.3
1,088,061	+				+0.5
1,088,061	+				-0.5
1,088,062	-				+0.6
1,088,062	-				+0.5
1,088,062	-				-0.6
1,088,062	-				-1.5
1,088,062	-				-0.7
1,088,086	+				-0.2
1,088,086	+				-0.3
1,088,086	+				-0.5
1,088,086	+				-0.0
1,088,086	+				-0.9
1,088,087	-				+0.0
1,088,087	-				-1.5
1,088,087	-				-0.7
1,088,087	-				+0.5
1,088,087	-				-0.7
1,088,087	-				+2.0
1,088,087	-				+0.3
1,088,087	-				+0.8
1,088,087	-				-0.7
1,088,113	-				+0.5
1,088,123	+				-0.3
1,088,123	+				+1.1
1,088,123	+				-2.6
1,088,123	+				-1.7
1,088,123	+				-0.7
1,088,123	+				-0.7
1,088,123	+				-0.2
1,088,124	-				+0.8
1,088,124	-				-2.2
1,088,124	-				-1.8
1,088,124	-				-0.5
1,088,124	-				+0.1
1,088,124	-				-1.8
1,088,166	+				-1.4
1,088,296	-				-0.7
1,088,361	+		MPMX19_01047	0.16	+0.5
1,088,361	+		MPMX19_01047	0.16	+1.2
1,088,361	+		MPMX19_01047	0.16	+0.3
1,088,361	+		MPMX19_01047	0.16	-0.1
1,088,361	+		MPMX19_01047	0.16	+1.0
1,088,361	+		MPMX19_01047	0.16	+0.5
1,088,362	-		MPMX19_01047	0.17	-0.1
1,088,362	-		MPMX19_01047	0.17	-0.0
1,088,362	-		MPMX19_01047	0.17	+0.2
1,088,362	-		MPMX19_01047	0.17	-0.8
1,088,362	-		MPMX19_01047	0.17	-0.2
1,088,383	-		MPMX19_01047	0.22	+1.1
1,088,433	+		MPMX19_01047	0.34	+0.3
1,088,433	+		MPMX19_01047	0.34	+1.2
1,088,434	-		MPMX19_01047	0.34	-1.0