Experiment: NL-CCM_agar
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00030 and MPMX19_00031 are separated by 115 nucleotides MPMX19_00031 and MPMX19_00032 are separated by 96 nucleotides
MPMX19_00030: MPMX19_00030 - D-inositol-3-phosphate glycosyltransferase, at 35,151 to 36,401
_00030
MPMX19_00031: MPMX19_00031 - hypothetical protein, at 36,517 to 37,311
_00031
MPMX19_00032: MPMX19_00032 - tRNA-Ser, at 37,408 to 37,498
_00032
Position (kb)
36
37
38 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 36.517 kb on - strand at 36.517 kb on - strand at 36.517 kb on - strand at 36.517 kb on - strand at 36.517 kb on - strand at 36.517 kb on - strand at 36.517 kb on - strand at 36.517 kb on - strand at 36.517 kb on - strand at 36.517 kb on - strand at 36.556 kb on - strand at 36.556 kb on - strand at 36.581 kb on + strand at 36.581 kb on + strand at 36.581 kb on + strand at 36.581 kb on + strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.582 kb on - strand at 36.587 kb on - strand at 36.587 kb on - strand at 36.587 kb on - strand at 36.587 kb on - strand at 36.587 kb on - strand at 36.587 kb on - strand at 36.587 kb on - strand at 36.733 kb on + strand, within MPMX19_00031 at 36.733 kb on + strand, within MPMX19_00031 at 36.733 kb on + strand, within MPMX19_00031 at 36.733 kb on + strand, within MPMX19_00031 at 36.733 kb on + strand, within MPMX19_00031 at 37.592 kb on - strand at 37.592 kb on - strand at 37.592 kb on - strand at 37.614 kb on + strand at 37.615 kb on - strand at 37.630 kb on - strand at 37.663 kb on + strand at 37.690 kb on + strand at 37.690 kb on + strand at 37.690 kb on + strand at 37.690 kb on + strand at 37.690 kb on + strand at 37.690 kb on + strand at 37.690 kb on + strand at 37.690 kb on + strand at 37.690 kb on + strand at 37.691 kb on - strand at 37.691 kb on - strand at 37.691 kb on - strand at 37.691 kb on - strand at 37.691 kb on - strand at 37.691 kb on - strand at 37.691 kb on - strand at 37.691 kb on - strand at 37.705 kb on - strand at 37.705 kb on - strand at 37.705 kb on - strand at 37.705 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM_agar remove 36,517 - -0.0 36,517 - +0.3 36,517 - -0.3 36,517 - +0.1 36,517 - +0.1 36,517 - +0.2 36,517 - -0.3 36,517 - +1.3 36,517 - -0.2 36,517 - +0.1 36,556 - -0.8 36,556 - +0.5 36,581 + -1.7 36,581 + +0.1 36,581 + -0.7 36,581 + -0.7 36,582 - -0.2 36,582 - -0.9 36,582 - -0.1 36,582 - -0.6 36,582 - +0.5 36,582 - -0.1 36,582 - -0.5 36,582 - -0.7 36,582 - +1.3 36,582 - +0.3 36,582 - +0.2 36,582 - +0.3 36,582 - -0.3 36,582 - -0.2 36,587 - -1.0 36,587 - -0.1 36,587 - -1.0 36,587 - -0.7 36,587 - -0.9 36,587 - -0.3 36,587 - +0.3 36,733 + MPMX19_00031 0.27 -2.2 36,733 + MPMX19_00031 0.27 -0.5 36,733 + MPMX19_00031 0.27 -0.9 36,733 + MPMX19_00031 0.27 -0.2 36,733 + MPMX19_00031 0.27 -1.4 37,592 - -0.6 37,592 - +0.1 37,592 - -0.7 37,614 + -1.5 37,615 - -0.9 37,630 - +0.3 37,663 + -0.9 37,690 + -0.7 37,690 + -0.7 37,690 + -1.0 37,690 + +0.8 37,690 + +0.7 37,690 + -0.2 37,690 + -0.0 37,690 + +0.2 37,690 + +1.8 37,691 - -0.6 37,691 - -2.4 37,691 - -0.4 37,691 - +0.4 37,691 - +0.3 37,691 - -0.3 37,691 - +0.3 37,691 - +0.3 37,705 - -0.6 37,705 - +1.7 37,705 - +1.2 37,705 - +0.4
Or see this region's nucleotide sequence