Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF980 and GFF981 are separated by 108 nucleotides GFF981 and GFF982 are separated by 124 nucleotides
GFF980 - hypothetical protein, at 211,244 to 212,170
GFF980
GFF981 - Protein SphX, at 212,279 to 213,274
GFF981
GFF982 - hypothetical protein, at 213,399 to 214,400
GFF982
Position (kb) 212
213
214 Strain fitness (log2 ratio) -2
-1
0
1 at 212.261 kb on + strand at 212.261 kb on + strand at 212.262 kb on - strand at 212.262 kb on - strand at 212.262 kb on - strand at 212.262 kb on - strand at 212.280 kb on + strand at 212.280 kb on + strand at 212.281 kb on - strand at 212.386 kb on - strand, within GFF981 at 213.385 kb on - strand at 213.385 kb on - strand at 213.385 kb on - strand at 213.389 kb on + strand at 213.389 kb on + strand at 213.389 kb on + strand at 213.389 kb on + strand at 213.390 kb on - strand at 213.390 kb on - strand at 213.390 kb on - strand at 213.390 kb on - strand at 213.390 kb on - strand at 213.390 kb on - strand at 213.390 kb on - strand at 213.390 kb on - strand at 213.390 kb on - strand at 213.400 kb on + strand at 213.401 kb on - strand at 213.401 kb on - strand at 213.773 kb on - strand, within GFF982 at 213.850 kb on - strand, within GFF982 at 213.850 kb on - strand, within GFF982 at 213.863 kb on + strand, within GFF982 at 213.878 kb on + strand, within GFF982 at 213.879 kb on - strand, within GFF982 at 213.897 kb on - strand, within GFF982 at 213.900 kb on - strand, within GFF982 at 213.981 kb on - strand, within GFF982 at 213.981 kb on - strand, within GFF982 at 214.007 kb on + strand, within GFF982 at 214.112 kb on + strand, within GFF982 at 214.112 kb on + strand, within GFF982 at 214.113 kb on - strand, within GFF982 at 214.160 kb on + strand, within GFF982 at 214.161 kb on - strand, within GFF982 at 214.161 kb on - strand, within GFF982 at 214.161 kb on - strand, within GFF982 at 214.161 kb on - strand, within GFF982 at 214.161 kb on - strand, within GFF982 at 214.163 kb on + strand, within GFF982 at 214.164 kb on - strand, within GFF982 at 214.182 kb on + strand, within GFF982 at 214.182 kb on + strand, within GFF982 at 214.182 kb on + strand, within GFF982 at 214.182 kb on + strand, within GFF982 at 214.182 kb on + strand, within GFF982 at 214.182 kb on + strand, within GFF982 at 214.182 kb on + strand, within GFF982 at 214.183 kb on - strand, within GFF982 at 214.183 kb on - strand, within GFF982 at 214.183 kb on - strand, within GFF982 at 214.183 kb on - strand, within GFF982 at 214.183 kb on - strand, within GFF982 at 214.183 kb on - strand, within GFF982 at 214.183 kb on - strand, within GFF982 at 214.183 kb on - strand, within GFF982 at 214.183 kb on - strand, within GFF982
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 212,261 + -0.9 212,261 + -0.3 212,262 - -0.3 212,262 - -1.3 212,262 - -2.4 212,262 - +0.0 212,280 + +0.1 212,280 + -1.0 212,281 - -0.8 212,386 - GFF981 0.11 -1.2 213,385 - -0.4 213,385 - -1.3 213,385 - -1.1 213,389 + -2.3 213,389 + -1.5 213,389 + -0.4 213,389 + -1.3 213,390 - -0.5 213,390 - -0.5 213,390 - +0.1 213,390 - -0.6 213,390 - -0.9 213,390 - -0.7 213,390 - -1.3 213,390 - -2.3 213,390 - -0.0 213,400 + -2.1 213,401 - -1.4 213,401 - +0.0 213,773 - GFF982 0.37 -2.0 213,850 - GFF982 0.45 -0.3 213,850 - GFF982 0.45 +0.4 213,863 + GFF982 0.46 -2.6 213,878 + GFF982 0.48 -0.6 213,879 - GFF982 0.48 -1.0 213,897 - GFF982 0.50 +0.9 213,900 - GFF982 0.50 +0.7 213,981 - GFF982 0.58 -0.1 213,981 - GFF982 0.58 -1.0 214,007 + GFF982 0.61 -1.3 214,112 + GFF982 0.71 -0.8 214,112 + GFF982 0.71 +1.0 214,113 - GFF982 0.71 +1.5 214,160 + GFF982 0.76 -0.7 214,161 - GFF982 0.76 -0.1 214,161 - GFF982 0.76 -0.8 214,161 - GFF982 0.76 -1.8 214,161 - GFF982 0.76 +0.0 214,161 - GFF982 0.76 -1.0 214,163 + GFF982 0.76 +0.0 214,164 - GFF982 0.76 -0.3 214,182 + GFF982 0.78 -1.0 214,182 + GFF982 0.78 -0.3 214,182 + GFF982 0.78 -0.2 214,182 + GFF982 0.78 -1.4 214,182 + GFF982 0.78 -1.2 214,182 + GFF982 0.78 -0.7 214,182 + GFF982 0.78 -1.2 214,183 - GFF982 0.78 +0.6 214,183 - GFF982 0.78 -0.2 214,183 - GFF982 0.78 -0.6 214,183 - GFF982 0.78 -1.0 214,183 - GFF982 0.78 +0.0 214,183 - GFF982 0.78 -0.2 214,183 - GFF982 0.78 -0.3 214,183 - GFF982 0.78 -0.2 214,183 - GFF982 0.78 +0.0
Or see this region's nucleotide sequence