Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF763 and GFF764 are separated by 60 nucleotides GFF764 and GFF765 are separated by 136 nucleotides GFF765 and GFF766 are separated by 56 nucleotides GFF766 and GFF767 are separated by 34 nucleotides GFF767 and GFF768 are separated by 60 nucleotides
GFF763 - hypothetical protein, at 4,433 to 5,758
GFF763
GFF764 - hypothetical protein, at 5,819 to 6,016
GFF764
GFF765 - Ribosomal RNA small subunit methyltransferase D, at 6,153 to 6,713
GFF765
GFF766 - Phosphopantetheine adenylyltransferase, at 6,770 to 7,258
GFF766
GFF767 - Ferredoxin, at 7,293 to 7,547
GFF767
GFF768 - Lactoylglutathione lyase, at 7,608 to 8,015
GFF768
Position (kb) 6
7 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5.206 kb on + strand, within GFF763 at 5.206 kb on + strand, within GFF763 at 5.300 kb on + strand, within GFF763 at 5.300 kb on + strand, within GFF763 at 5.300 kb on + strand, within GFF763 at 5.300 kb on + strand, within GFF763 at 5.300 kb on + strand, within GFF763 at 5.300 kb on + strand, within GFF763 at 5.308 kb on + strand, within GFF763 at 5.312 kb on + strand, within GFF763 at 5.312 kb on + strand, within GFF763 at 5.312 kb on + strand, within GFF763 at 5.312 kb on + strand, within GFF763 at 5.312 kb on + strand, within GFF763 at 5.312 kb on + strand, within GFF763 at 5.312 kb on + strand, within GFF763 at 5.312 kb on + strand, within GFF763 at 5.313 kb on + strand, within GFF763 at 5.314 kb on + strand, within GFF763 at 5.314 kb on + strand, within GFF763 at 5.314 kb on + strand, within GFF763 at 5.314 kb on + strand, within GFF763 at 5.315 kb on - strand, within GFF763 at 5.315 kb on - strand, within GFF763 at 5.315 kb on - strand, within GFF763 at 5.381 kb on + strand, within GFF763 at 5.382 kb on - strand, within GFF763 at 5.382 kb on - strand, within GFF763 at 5.383 kb on + strand, within GFF763 at 5.383 kb on + strand, within GFF763 at 5.383 kb on + strand, within GFF763 at 5.384 kb on - strand, within GFF763 at 5.384 kb on - strand, within GFF763 at 5.384 kb on - strand, within GFF763 at 5.390 kb on + strand, within GFF763 at 5.390 kb on + strand, within GFF763 at 5.391 kb on - strand, within GFF763 at 5.391 kb on - strand, within GFF763 at 5.391 kb on - strand, within GFF763 at 5.391 kb on - strand, within GFF763 at 5.391 kb on - strand, within GFF763 at 5.391 kb on - strand, within GFF763 at 5.392 kb on + strand, within GFF763 at 5.392 kb on + strand, within GFF763 at 5.392 kb on + strand, within GFF763 at 5.392 kb on + strand, within GFF763 at 5.392 kb on + strand, within GFF763 at 5.392 kb on + strand, within GFF763 at 5.393 kb on - strand, within GFF763 at 5.396 kb on + strand, within GFF763 at 5.396 kb on + strand, within GFF763 at 5.396 kb on + strand, within GFF763 at 5.396 kb on + strand, within GFF763 at 5.396 kb on + strand, within GFF763 at 5.396 kb on + strand, within GFF763 at 5.396 kb on + strand, within GFF763 at 5.396 kb on + strand, within GFF763 at 5.396 kb on + strand, within GFF763 at 5.396 kb on + strand, within GFF763 at 5.396 kb on + strand, within GFF763 at 5.396 kb on + strand, within GFF763 at 5.397 kb on - strand, within GFF763 at 5.397 kb on - strand, within GFF763 at 5.397 kb on - strand, within GFF763 at 5.401 kb on + strand, within GFF763 at 5.402 kb on - strand, within GFF763 at 5.575 kb on + strand, within GFF763 at 5.575 kb on + strand, within GFF763 at 5.575 kb on + strand, within GFF763 at 5.575 kb on + strand, within GFF763 at 5.575 kb on + strand, within GFF763 at 5.575 kb on + strand, within GFF763 at 5.575 kb on + strand, within GFF763 at 5.576 kb on - strand, within GFF763 at 5.576 kb on - strand, within GFF763 at 5.576 kb on - strand, within GFF763 at 5.576 kb on - strand, within GFF763 at 5.576 kb on - strand, within GFF763 at 5.576 kb on - strand, within GFF763 at 5.577 kb on + strand, within GFF763 at 5.577 kb on + strand, within GFF763 at 5.577 kb on + strand, within GFF763 at 5.577 kb on + strand, within GFF763 at 5.577 kb on + strand, within GFF763 at 5.584 kb on + strand, within GFF763 at 5.584 kb on + strand, within GFF763 at 5.584 kb on + strand, within GFF763 at 5.585 kb on - strand, within GFF763 at 5.585 kb on - strand, within GFF763 at 5.587 kb on + strand, within GFF763 at 5.587 kb on + strand, within GFF763 at 5.587 kb on + strand, within GFF763 at 5.587 kb on + strand, within GFF763 at 5.588 kb on - strand, within GFF763 at 5.624 kb on + strand, within GFF763 at 5.624 kb on + strand, within GFF763 at 5.625 kb on - strand, within GFF763 at 5.642 kb on + strand at 5.650 kb on + strand at 5.650 kb on + strand at 5.651 kb on - strand at 5.651 kb on - strand at 5.656 kb on + strand at 5.797 kb on + strand at 5.798 kb on - strand at 5.798 kb on - strand at 5.820 kb on + strand at 5.821 kb on - strand at 5.851 kb on - strand, within GFF764 at 5.851 kb on - strand, within GFF764 at 5.851 kb on - strand, within GFF764 at 5.851 kb on - strand, within GFF764 at 5.851 kb on - strand, within GFF764 at 5.853 kb on + strand, within GFF764 at 5.854 kb on - strand, within GFF764 at 5.854 kb on - strand, within GFF764 at 5.854 kb on - strand, within GFF764 at 5.854 kb on - strand, within GFF764 at 5.855 kb on + strand, within GFF764 at 5.856 kb on - strand, within GFF764 at 5.856 kb on - strand, within GFF764 at 6.005 kb on + strand at 6.006 kb on - strand at 6.006 kb on - strand at 6.006 kb on - strand at 6.017 kb on - strand at 6.022 kb on + strand at 6.022 kb on + strand at 6.022 kb on + strand at 6.023 kb on - strand at 6.023 kb on - strand at 6.023 kb on - strand at 6.023 kb on - strand at 6.023 kb on - strand at 6.049 kb on - strand at 6.094 kb on + strand at 6.118 kb on - strand at 6.128 kb on + strand at 6.128 kb on + strand at 6.129 kb on - strand at 6.132 kb on + strand at 6.132 kb on + strand at 6.133 kb on - strand at 6.260 kb on + strand, within GFF765 at 6.260 kb on + strand, within GFF765 at 6.583 kb on + strand, within GFF765 at 6.583 kb on + strand, within GFF765 at 6.584 kb on - strand, within GFF765 at 6.584 kb on - strand, within GFF765 at 6.585 kb on + strand, within GFF765 at 6.585 kb on + strand, within GFF765 at 6.585 kb on + strand, within GFF765 at 6.586 kb on - strand, within GFF765 at 6.586 kb on - strand, within GFF765 at 6.586 kb on - strand, within GFF765 at 6.600 kb on + strand, within GFF765 at 6.600 kb on + strand, within GFF765 at 6.756 kb on + strand at 7.274 kb on + strand at 7.282 kb on + strand at 7.282 kb on + strand at 7.283 kb on - strand at 7.300 kb on + strand at 7.300 kb on + strand at 7.301 kb on - strand at 7.301 kb on - strand at 7.301 kb on - strand at 7.304 kb on + strand at 7.304 kb on + strand at 7.308 kb on - strand at 7.319 kb on + strand, within GFF767 at 7.319 kb on + strand, within GFF767 at 7.319 kb on + strand, within GFF767 at 7.319 kb on + strand, within GFF767 at 7.319 kb on + strand, within GFF767 at 7.320 kb on - strand, within GFF767 at 7.320 kb on - strand, within GFF767 at 7.320 kb on - strand, within GFF767 at 7.320 kb on - strand, within GFF767 at 7.320 kb on - strand, within GFF767 at 7.320 kb on - strand, within GFF767 at 7.320 kb on - strand, within GFF767 at 7.320 kb on - strand, within GFF767 at 7.322 kb on + strand, within GFF767 at 7.322 kb on + strand, within GFF767 at 7.426 kb on - strand, within GFF767 at 7.431 kb on - strand, within GFF767 at 7.518 kb on + strand, within GFF767 at 7.519 kb on - strand, within GFF767 at 7.546 kb on - strand at 7.563 kb on + strand at 7.563 kb on + strand at 7.563 kb on + strand at 7.618 kb on + strand at 7.619 kb on - strand at 7.619 kb on - strand at 7.619 kb on - strand at 7.619 kb on - strand at 7.619 kb on - strand at 7.622 kb on + strand at 7.622 kb on + strand at 7.622 kb on + strand at 7.622 kb on + strand at 7.623 kb on - strand at 7.623 kb on - strand at 7.665 kb on + strand, within GFF768 at 7.666 kb on - strand, within GFF768 at 7.666 kb on - strand, within GFF768 at 7.667 kb on + strand, within GFF768 at 7.668 kb on - strand, within GFF768 at 7.668 kb on - strand, within GFF768 at 7.676 kb on - strand, within GFF768
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 5,206 + GFF763 0.58 +0.6 5,206 + GFF763 0.58 -1.2 5,300 + GFF763 0.65 +0.3 5,300 + GFF763 0.65 +0.9 5,300 + GFF763 0.65 +0.4 5,300 + GFF763 0.65 -0.6 5,300 + GFF763 0.65 -1.0 5,300 + GFF763 0.65 -1.0 5,308 + GFF763 0.66 -1.0 5,312 + GFF763 0.66 -0.6 5,312 + GFF763 0.66 -1.2 5,312 + GFF763 0.66 -0.3 5,312 + GFF763 0.66 +0.1 5,312 + GFF763 0.66 -1.0 5,312 + GFF763 0.66 +0.7 5,312 + GFF763 0.66 +0.1 5,312 + GFF763 0.66 -0.8 5,313 + GFF763 0.66 -0.2 5,314 + GFF763 0.66 -0.8 5,314 + GFF763 0.66 -0.4 5,314 + GFF763 0.66 +0.3 5,314 + GFF763 0.66 -0.6 5,315 - GFF763 0.67 -0.6 5,315 - GFF763 0.67 -1.3 5,315 - GFF763 0.67 -0.9 5,381 + GFF763 0.71 -0.6 5,382 - GFF763 0.72 -0.3 5,382 - GFF763 0.72 -1.0 5,383 + GFF763 0.72 -0.0 5,383 + GFF763 0.72 +0.7 5,383 + GFF763 0.72 -0.5 5,384 - GFF763 0.72 -0.6 5,384 - GFF763 0.72 -1.2 5,384 - GFF763 0.72 -0.2 5,390 + GFF763 0.72 -1.3 5,390 + GFF763 0.72 -0.6 5,391 - GFF763 0.72 -0.0 5,391 - GFF763 0.72 -0.0 5,391 - GFF763 0.72 -0.2 5,391 - GFF763 0.72 -1.7 5,391 - GFF763 0.72 -0.3 5,391 - GFF763 0.72 +0.3 5,392 + GFF763 0.72 +0.4 5,392 + GFF763 0.72 -0.1 5,392 + GFF763 0.72 -0.5 5,392 + GFF763 0.72 -0.5 5,392 + GFF763 0.72 +1.6 5,392 + GFF763 0.72 +0.6 5,393 - GFF763 0.72 -0.0 5,396 + GFF763 0.73 -1.0 5,396 + GFF763 0.73 +0.6 5,396 + GFF763 0.73 -0.7 5,396 + GFF763 0.73 -0.5 5,396 + GFF763 0.73 +0.7 5,396 + GFF763 0.73 -0.2 5,396 + GFF763 0.73 -0.6 5,396 + GFF763 0.73 -0.2 5,396 + GFF763 0.73 -0.8 5,396 + GFF763 0.73 +1.3 5,396 + GFF763 0.73 -0.2 5,396 + GFF763 0.73 +1.0 5,397 - GFF763 0.73 +0.7 5,397 - GFF763 0.73 -1.0 5,397 - GFF763 0.73 -1.8 5,401 + GFF763 0.73 -1.8 5,402 - GFF763 0.73 -0.6 5,575 + GFF763 0.86 -1.6 5,575 + GFF763 0.86 +0.6 5,575 + GFF763 0.86 -0.3 5,575 + GFF763 0.86 -0.0 5,575 + GFF763 0.86 -0.2 5,575 + GFF763 0.86 -0.2 5,575 + GFF763 0.86 +0.5 5,576 - GFF763 0.86 -0.5 5,576 - GFF763 0.86 +0.6 5,576 - GFF763 0.86 -0.6 5,576 - GFF763 0.86 -2.2 5,576 - GFF763 0.86 -0.3 5,576 - GFF763 0.86 -0.5 5,577 + GFF763 0.86 -0.1 5,577 + GFF763 0.86 -1.3 5,577 + GFF763 0.86 -0.1 5,577 + GFF763 0.86 -2.0 5,577 + GFF763 0.86 -0.1 5,584 + GFF763 0.87 -0.9 5,584 + GFF763 0.87 -1.0 5,584 + GFF763 0.87 -0.4 5,585 - GFF763 0.87 -0.3 5,585 - GFF763 0.87 -1.3 5,587 + GFF763 0.87 -1.0 5,587 + GFF763 0.87 -0.8 5,587 + GFF763 0.87 -0.8 5,587 + GFF763 0.87 -0.8 5,588 - GFF763 0.87 -1.5 5,624 + GFF763 0.90 -1.8 5,624 + GFF763 0.90 -0.8 5,625 - GFF763 0.90 -0.2 5,642 + +0.4 5,650 + -0.8 5,650 + -1.3 5,651 - +0.3 5,651 - +0.3 5,656 + -0.6 5,797 + -1.8 5,798 - +0.5 5,798 - +0.9 5,820 + -0.0 5,821 - -0.4 5,851 - GFF764 0.16 -0.5 5,851 - GFF764 0.16 +0.3 5,851 - GFF764 0.16 +0.4 5,851 - GFF764 0.16 -0.5 5,851 - GFF764 0.16 -1.0 5,853 + GFF764 0.17 -0.4 5,854 - GFF764 0.18 -0.0 5,854 - GFF764 0.18 -0.3 5,854 - GFF764 0.18 -1.1 5,854 - GFF764 0.18 -0.4 5,855 + GFF764 0.18 -0.3 5,856 - GFF764 0.19 -2.2 5,856 - GFF764 0.19 +1.5 6,005 + -0.0 6,006 - -0.6 6,006 - +0.1 6,006 - -0.6 6,017 - -0.6 6,022 + +0.8 6,022 + +0.4 6,022 + -0.0 6,023 - +1.3 6,023 - +0.1 6,023 - -0.8 6,023 - +1.0 6,023 - -0.0 6,049 - -0.4 6,094 + -0.9 6,118 - +1.0 6,128 + +0.3 6,128 + -1.3 6,129 - -0.5 6,132 + -1.3 6,132 + -0.6 6,133 - +0.7 6,260 + GFF765 0.19 +0.3 6,260 + GFF765 0.19 -1.8 6,583 + GFF765 0.77 -0.9 6,583 + GFF765 0.77 -0.0 6,584 - GFF765 0.77 -0.6 6,584 - GFF765 0.77 +0.4 6,585 + GFF765 0.77 -0.0 6,585 + GFF765 0.77 -1.0 6,585 + GFF765 0.77 -0.2 6,586 - GFF765 0.77 -1.0 6,586 - GFF765 0.77 -0.6 6,586 - GFF765 0.77 -1.9 6,600 + GFF765 0.80 -1.0 6,600 + GFF765 0.80 -0.6 6,756 + -0.8 7,274 + +0.9 7,282 + +0.3 7,282 + +0.2 7,283 - -1.5 7,300 + -2.2 7,300 + -1.0 7,301 - -0.0 7,301 - -1.0 7,301 - +0.6 7,304 + -1.0 7,304 + -1.8 7,308 - -0.6 7,319 + GFF767 0.10 -1.9 7,319 + GFF767 0.10 -2.1 7,319 + GFF767 0.10 -2.2 7,319 + GFF767 0.10 -2.5 7,319 + GFF767 0.10 -1.0 7,320 - GFF767 0.11 -3.4 7,320 - GFF767 0.11 -0.5 7,320 - GFF767 0.11 -1.0 7,320 - GFF767 0.11 -2.3 7,320 - GFF767 0.11 -1.9 7,320 - GFF767 0.11 -2.4 7,320 - GFF767 0.11 -1.7 7,320 - GFF767 0.11 -1.3 7,322 + GFF767 0.11 -2.6 7,322 + GFF767 0.11 -1.6 7,426 - GFF767 0.52 -3.3 7,431 - GFF767 0.54 -2.5 7,518 + GFF767 0.88 +0.2 7,519 - GFF767 0.89 -1.3 7,546 - +1.0 7,563 + -1.2 7,563 + -0.0 7,563 + -1.4 7,618 + -0.9 7,619 - -1.0 7,619 - -0.0 7,619 - -1.0 7,619 - -0.7 7,619 - -1.3 7,622 + -0.0 7,622 + -0.6 7,622 + -1.0 7,622 + -1.6 7,623 - +0.6 7,623 - -1.2 7,665 + GFF768 0.14 -1.8 7,666 - GFF768 0.14 -1.5 7,666 - GFF768 0.14 -1.0 7,667 + GFF768 0.14 -1.1 7,668 - GFF768 0.15 +0.1 7,668 - GFF768 0.15 -0.2 7,676 - GFF768 0.17 -2.9
Or see this region's nucleotide sequence