Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF290 and GFF291 are separated by 8 nucleotides GFF291 and GFF292 overlap by 41 nucleotides GFF292 and GFF293 are separated by 52 nucleotides
GFF290 - hypothetical protein, at 309,671 to 310,333
GFF290
GFF291 - hypothetical protein, at 310,342 to 311,343
GFF291
GFF292 - hypothetical protein, at 311,303 to 312,433
GFF292
GFF293 - hypothetical protein, at 312,486 to 314,021
GFF293
Position (kb) 311
312
313 Strain fitness (log2 ratio) -2
-1
0
1 at 310.333 kb on + strand at 310.443 kb on + strand, within GFF291 at 310.444 kb on - strand, within GFF291 at 310.444 kb on - strand, within GFF291 at 310.446 kb on - strand, within GFF291 at 310.448 kb on - strand, within GFF291 at 310.693 kb on - strand, within GFF291 at 311.040 kb on - strand, within GFF291 at 311.301 kb on - strand at 311.359 kb on - strand at 311.359 kb on - strand at 311.359 kb on - strand at 311.359 kb on - strand at 311.453 kb on - strand, within GFF292 at 311.659 kb on - strand, within GFF292 at 311.659 kb on - strand, within GFF292 at 311.659 kb on - strand, within GFF292 at 311.659 kb on - strand, within GFF292 at 311.716 kb on - strand, within GFF292 at 311.971 kb on - strand, within GFF292 at 312.046 kb on - strand, within GFF292 at 312.058 kb on - strand, within GFF292 at 312.096 kb on - strand, within GFF292 at 312.226 kb on - strand, within GFF292 at 312.258 kb on - strand, within GFF292 at 312.525 kb on - strand at 312.605 kb on - strand at 312.642 kb on - strand, within GFF293 at 312.642 kb on - strand, within GFF293 at 312.642 kb on - strand, within GFF293 at 312.644 kb on - strand, within GFF293 at 312.644 kb on - strand, within GFF293 at 312.647 kb on - strand, within GFF293 at 312.653 kb on - strand, within GFF293 at 312.696 kb on - strand, within GFF293 at 312.696 kb on - strand, within GFF293 at 312.848 kb on - strand, within GFF293 at 312.897 kb on - strand, within GFF293 at 313.213 kb on - strand, within GFF293 at 313.213 kb on - strand, within GFF293 at 313.327 kb on - strand, within GFF293 at 313.430 kb on - strand, within GFF293
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 310,333 + -1.1 310,443 + GFF291 0.10 -0.9 310,444 - GFF291 0.10 +0.1 310,444 - GFF291 0.10 -1.4 310,446 - GFF291 0.10 -1.3 310,448 - GFF291 0.11 -1.5 310,693 - GFF291 0.35 -0.9 311,040 - GFF291 0.70 -1.3 311,301 - -1.3 311,359 - +0.5 311,359 - -0.8 311,359 - -1.3 311,359 - -0.3 311,453 - GFF292 0.13 -0.9 311,659 - GFF292 0.31 -1.8 311,659 - GFF292 0.31 -1.5 311,659 - GFF292 0.31 +0.3 311,659 - GFF292 0.31 -1.3 311,716 - GFF292 0.37 -0.3 311,971 - GFF292 0.59 -0.9 312,046 - GFF292 0.66 -0.5 312,058 - GFF292 0.67 -1.1 312,096 - GFF292 0.70 -1.3 312,226 - GFF292 0.82 -1.8 312,258 - GFF292 0.84 +0.6 312,525 - -0.9 312,605 - -0.9 312,642 - GFF293 0.10 -1.5 312,642 - GFF293 0.10 -0.9 312,642 - GFF293 0.10 -1.3 312,644 - GFF293 0.10 -1.4 312,644 - GFF293 0.10 -1.5 312,647 - GFF293 0.10 -1.5 312,653 - GFF293 0.11 -0.9 312,696 - GFF293 0.14 -1.3 312,696 - GFF293 0.14 +0.1 312,848 - GFF293 0.24 -0.9 312,897 - GFF293 0.27 -1.5 313,213 - GFF293 0.47 -1.5 313,213 - GFF293 0.47 -0.9 313,327 - GFF293 0.55 -0.9 313,430 - GFF293 0.61 -1.3
Or see this region's nucleotide sequence