Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF195 and GFF196 are separated by 263 nucleotides GFF196 and GFF197 are separated by 574 nucleotides GFF197 and GFF198 are separated by 122 nucleotides
GFF195 - hypothetical protein, at 193,179 to 195,776
GFF195
GFF196 - Hydrogen peroxide-inducible genes activator, at 196,040 to 196,948
GFF196
GFF197 - hypothetical protein, at 197,523 to 197,768
GFF197
GFF198 - hypothetical protein, at 197,891 to 198,550
GFF198
Position (kb) 196
197 Strain fitness (log2 ratio) -2
-1
0
1 at 195.148 kb on + strand, within GFF195 at 195.149 kb on - strand, within GFF195 at 195.154 kb on - strand, within GFF195 at 195.193 kb on + strand, within GFF195 at 195.193 kb on + strand, within GFF195 at 195.193 kb on + strand, within GFF195 at 195.193 kb on + strand, within GFF195 at 195.194 kb on - strand, within GFF195 at 195.194 kb on - strand, within GFF195 at 195.194 kb on - strand, within GFF195 at 195.265 kb on + strand, within GFF195 at 195.266 kb on - strand, within GFF195 at 195.348 kb on - strand, within GFF195 at 195.385 kb on + strand, within GFF195 at 195.385 kb on + strand, within GFF195 at 195.385 kb on + strand, within GFF195 at 195.385 kb on + strand, within GFF195 at 195.385 kb on + strand, within GFF195 at 195.386 kb on - strand, within GFF195 at 195.386 kb on - strand, within GFF195 at 195.386 kb on - strand, within GFF195 at 195.386 kb on - strand, within GFF195 at 195.386 kb on - strand, within GFF195 at 195.386 kb on - strand, within GFF195 at 195.387 kb on + strand, within GFF195 at 195.387 kb on + strand, within GFF195 at 195.415 kb on + strand, within GFF195 at 195.415 kb on + strand, within GFF195 at 195.415 kb on + strand, within GFF195 at 195.415 kb on + strand, within GFF195 at 195.415 kb on + strand, within GFF195 at 195.415 kb on + strand, within GFF195 at 195.415 kb on + strand, within GFF195 at 195.416 kb on - strand, within GFF195 at 195.416 kb on - strand, within GFF195 at 195.416 kb on - strand, within GFF195 at 195.455 kb on + strand, within GFF195 at 195.456 kb on - strand, within GFF195 at 195.456 kb on - strand, within GFF195 at 195.500 kb on + strand, within GFF195 at 195.501 kb on - strand, within GFF195 at 195.606 kb on + strand at 195.606 kb on + strand at 195.607 kb on - strand at 195.607 kb on - strand at 195.607 kb on - strand at 195.633 kb on + strand at 195.634 kb on - strand at 195.646 kb on + strand at 195.646 kb on + strand at 195.646 kb on + strand at 195.646 kb on + strand at 195.646 kb on + strand at 195.646 kb on + strand at 195.647 kb on - strand at 195.647 kb on - strand at 195.647 kb on - strand at 195.647 kb on - strand at 195.647 kb on - strand at 195.647 kb on - strand at 195.647 kb on - strand at 195.647 kb on - strand at 195.675 kb on - strand at 195.686 kb on + strand at 195.687 kb on - strand at 195.687 kb on - strand at 195.723 kb on - strand at 195.750 kb on - strand at 195.792 kb on + strand at 195.793 kb on - strand at 195.796 kb on - strand at 195.809 kb on + strand at 195.809 kb on + strand at 195.821 kb on - strand at 195.831 kb on + strand at 195.846 kb on + strand at 195.846 kb on + strand at 195.846 kb on + strand at 195.847 kb on - strand at 195.847 kb on - strand at 195.847 kb on - strand at 195.847 kb on - strand at 195.876 kb on + strand at 195.877 kb on - strand at 195.899 kb on + strand at 195.899 kb on + strand at 195.900 kb on - strand at 195.917 kb on - strand at 195.917 kb on - strand at 195.917 kb on - strand at 195.925 kb on + strand at 195.953 kb on + strand at 195.963 kb on + strand at 195.963 kb on + strand at 195.963 kb on + strand at 195.964 kb on - strand at 195.964 kb on - strand at 195.964 kb on - strand at 196.080 kb on + strand at 196.081 kb on - strand at 196.081 kb on - strand at 196.081 kb on - strand at 196.084 kb on + strand at 196.084 kb on + strand at 196.084 kb on + strand at 196.085 kb on - strand at 196.085 kb on - strand at 196.085 kb on - strand at 196.085 kb on - strand at 196.100 kb on + strand at 196.123 kb on + strand at 196.124 kb on - strand at 196.170 kb on + strand, within GFF196 at 196.175 kb on - strand, within GFF196 at 196.176 kb on + strand, within GFF196 at 196.176 kb on + strand, within GFF196 at 196.176 kb on + strand, within GFF196 at 196.176 kb on + strand, within GFF196 at 196.176 kb on + strand, within GFF196 at 196.176 kb on + strand, within GFF196 at 196.176 kb on + strand, within GFF196 at 196.176 kb on + strand, within GFF196 at 196.176 kb on + strand, within GFF196 at 196.176 kb on + strand, within GFF196 at 196.176 kb on + strand, within GFF196 at 196.177 kb on - strand, within GFF196 at 196.177 kb on - strand, within GFF196 at 196.177 kb on - strand, within GFF196 at 196.177 kb on - strand, within GFF196 at 196.177 kb on - strand, within GFF196 at 196.177 kb on - strand, within GFF196 at 196.177 kb on - strand, within GFF196 at 196.177 kb on - strand, within GFF196 at 196.177 kb on - strand, within GFF196 at 196.425 kb on + strand, within GFF196 at 196.425 kb on + strand, within GFF196 at 196.426 kb on - strand, within GFF196 at 196.426 kb on - strand, within GFF196 at 196.426 kb on - strand, within GFF196 at 196.448 kb on + strand, within GFF196 at 196.448 kb on + strand, within GFF196 at 196.449 kb on - strand, within GFF196 at 196.452 kb on + strand, within GFF196 at 196.452 kb on + strand, within GFF196 at 196.452 kb on + strand, within GFF196 at 196.452 kb on + strand, within GFF196 at 196.452 kb on + strand, within GFF196 at 196.452 kb on + strand, within GFF196 at 196.452 kb on + strand, within GFF196 at 196.453 kb on - strand, within GFF196 at 196.453 kb on - strand, within GFF196 at 196.453 kb on - strand, within GFF196 at 196.453 kb on - strand, within GFF196 at 196.515 kb on - strand, within GFF196 at 196.589 kb on - strand, within GFF196 at 196.589 kb on - strand, within GFF196 at 196.611 kb on - strand, within GFF196 at 196.623 kb on + strand, within GFF196 at 196.623 kb on + strand, within GFF196 at 196.623 kb on + strand, within GFF196 at 196.623 kb on + strand, within GFF196 at 196.623 kb on + strand, within GFF196 at 196.623 kb on + strand, within GFF196 at 196.623 kb on + strand, within GFF196 at 196.623 kb on + strand, within GFF196 at 196.623 kb on + strand, within GFF196 at 196.623 kb on + strand, within GFF196 at 196.623 kb on + strand, within GFF196 at 196.624 kb on - strand, within GFF196 at 196.624 kb on - strand, within GFF196 at 196.624 kb on - strand, within GFF196 at 196.624 kb on - strand, within GFF196 at 196.624 kb on - strand, within GFF196 at 196.756 kb on + strand, within GFF196 at 196.825 kb on - strand, within GFF196 at 196.825 kb on - strand, within GFF196 at 196.904 kb on - strand at 196.922 kb on + strand at 196.922 kb on + strand at 196.922 kb on + strand at 196.926 kb on + strand at 196.926 kb on + strand at 196.927 kb on - strand at 196.940 kb on + strand at 197.135 kb on + strand at 197.135 kb on + strand at 197.135 kb on + strand at 197.135 kb on + strand at 197.135 kb on + strand at 197.135 kb on + strand at 197.136 kb on - strand at 197.136 kb on - strand at 197.136 kb on - strand at 197.136 kb on - strand at 197.136 kb on - strand at 197.136 kb on - strand at 197.136 kb on - strand at 197.136 kb on - strand at 197.215 kb on + strand at 197.216 kb on - strand at 197.216 kb on - strand at 197.251 kb on + strand at 197.251 kb on + strand at 197.252 kb on - strand at 197.283 kb on + strand at 197.283 kb on + strand at 197.284 kb on - strand at 197.321 kb on - strand at 197.333 kb on - strand at 197.335 kb on + strand at 197.352 kb on - strand at 197.374 kb on + strand at 197.378 kb on + strand at 197.388 kb on + strand at 197.388 kb on + strand at 197.389 kb on - strand at 197.389 kb on - strand at 197.431 kb on + strand at 197.432 kb on - strand at 197.432 kb on - strand at 197.495 kb on + strand at 197.495 kb on + strand at 197.496 kb on - strand at 197.499 kb on + strand at 197.511 kb on + strand at 197.511 kb on + strand at 197.511 kb on + strand at 197.511 kb on + strand at 197.512 kb on - strand at 197.512 kb on - strand at 197.533 kb on + strand at 197.533 kb on + strand at 197.533 kb on + strand at 197.537 kb on + strand at 197.537 kb on + strand at 197.537 kb on + strand at 197.537 kb on + strand at 197.538 kb on - strand at 197.627 kb on + strand, within GFF197 at 197.627 kb on + strand, within GFF197 at 197.627 kb on + strand, within GFF197 at 197.628 kb on - strand, within GFF197 at 197.717 kb on + strand, within GFF197 at 197.717 kb on + strand, within GFF197 at 197.884 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 195,148 + GFF195 0.76 +0.2 195,149 - GFF195 0.76 -0.3 195,154 - GFF195 0.76 -0.1 195,193 + GFF195 0.78 +0.5 195,193 + GFF195 0.78 -0.7 195,193 + GFF195 0.78 -2.2 195,193 + GFF195 0.78 -0.5 195,194 - GFF195 0.78 -0.5 195,194 - GFF195 0.78 +0.3 195,194 - GFF195 0.78 -0.7 195,265 + GFF195 0.80 +0.6 195,266 - GFF195 0.80 +0.8 195,348 - GFF195 0.83 -1.0 195,385 + GFF195 0.85 -0.2 195,385 + GFF195 0.85 -1.3 195,385 + GFF195 0.85 -1.1 195,385 + GFF195 0.85 +0.5 195,385 + GFF195 0.85 +0.7 195,386 - GFF195 0.85 -0.5 195,386 - GFF195 0.85 -0.1 195,386 - GFF195 0.85 +0.6 195,386 - GFF195 0.85 -0.9 195,386 - GFF195 0.85 -1.3 195,386 - GFF195 0.85 -0.3 195,387 + GFF195 0.85 -0.2 195,387 + GFF195 0.85 +0.0 195,415 + GFF195 0.86 -0.5 195,415 + GFF195 0.86 -0.3 195,415 + GFF195 0.86 -0.9 195,415 + GFF195 0.86 -0.3 195,415 + GFF195 0.86 +0.0 195,415 + GFF195 0.86 -0.3 195,415 + GFF195 0.86 -1.1 195,416 - GFF195 0.86 -0.4 195,416 - GFF195 0.86 -1.0 195,416 - GFF195 0.86 -0.5 195,455 + GFF195 0.88 -0.2 195,456 - GFF195 0.88 +0.0 195,456 - GFF195 0.88 -1.8 195,500 + GFF195 0.89 +1.3 195,501 - GFF195 0.89 +0.2 195,606 + +0.0 195,606 + -1.1 195,607 - -0.4 195,607 - -0.5 195,607 - -1.0 195,633 + +1.6 195,634 - -1.3 195,646 + +1.4 195,646 + -0.7 195,646 + -0.8 195,646 + +0.5 195,646 + +0.6 195,646 + -1.0 195,647 - -0.4 195,647 - -1.5 195,647 - +0.0 195,647 - -0.5 195,647 - -1.1 195,647 - -0.5 195,647 - +0.8 195,647 - +0.3 195,675 - -1.1 195,686 + -0.2 195,687 - -0.2 195,687 - -0.8 195,723 - -0.7 195,750 - -1.0 195,792 + -0.5 195,793 - -0.3 195,796 - -0.1 195,809 + -1.2 195,809 + -0.1 195,821 - -0.8 195,831 + -0.5 195,846 + +0.3 195,846 + -0.6 195,846 + -1.2 195,847 - -0.3 195,847 - +1.4 195,847 - +0.9 195,847 - -0.9 195,876 + -2.0 195,877 - -1.8 195,899 + -0.6 195,899 + -1.0 195,900 - -0.1 195,917 - -1.3 195,917 - -0.5 195,917 - -0.8 195,925 + -0.2 195,953 + -1.5 195,963 + +0.6 195,963 + -1.8 195,963 + -0.2 195,964 - -1.0 195,964 - -0.8 195,964 - -0.5 196,080 + -0.7 196,081 - +0.9 196,081 - -0.5 196,081 - +0.8 196,084 + -0.4 196,084 + -1.0 196,084 + -1.3 196,085 - -1.0 196,085 - +0.0 196,085 - -1.0 196,085 - -0.6 196,100 + -1.2 196,123 + -0.5 196,124 - -1.0 196,170 + GFF196 0.14 -1.0 196,175 - GFF196 0.15 +0.6 196,176 + GFF196 0.15 +0.0 196,176 + GFF196 0.15 -0.7 196,176 + GFF196 0.15 +0.0 196,176 + GFF196 0.15 -1.8 196,176 + GFF196 0.15 +0.6 196,176 + GFF196 0.15 -0.0 196,176 + GFF196 0.15 -1.0 196,176 + GFF196 0.15 -0.7 196,176 + GFF196 0.15 +0.6 196,176 + GFF196 0.15 -0.2 196,176 + GFF196 0.15 +0.5 196,177 - GFF196 0.15 -0.8 196,177 - GFF196 0.15 -1.0 196,177 - GFF196 0.15 -1.0 196,177 - GFF196 0.15 -0.8 196,177 - GFF196 0.15 +0.2 196,177 - GFF196 0.15 +0.3 196,177 - GFF196 0.15 -1.3 196,177 - GFF196 0.15 -1.3 196,177 - GFF196 0.15 +0.5 196,425 + GFF196 0.42 -0.2 196,425 + GFF196 0.42 +1.0 196,426 - GFF196 0.42 -1.7 196,426 - GFF196 0.42 -0.3 196,426 - GFF196 0.42 +0.6 196,448 + GFF196 0.45 -1.5 196,448 + GFF196 0.45 +0.2 196,449 - GFF196 0.45 -1.8 196,452 + GFF196 0.45 -0.3 196,452 + GFF196 0.45 +0.0 196,452 + GFF196 0.45 -0.5 196,452 + GFF196 0.45 -1.0 196,452 + GFF196 0.45 +0.0 196,452 + GFF196 0.45 -0.3 196,452 + GFF196 0.45 -0.7 196,453 - GFF196 0.45 -0.8 196,453 - GFF196 0.45 -0.6 196,453 - GFF196 0.45 -0.2 196,453 - GFF196 0.45 -2.4 196,515 - GFF196 0.52 -2.1 196,589 - GFF196 0.60 +0.1 196,589 - GFF196 0.60 -1.5 196,611 - GFF196 0.63 -1.1 196,623 + GFF196 0.64 +0.0 196,623 + GFF196 0.64 -0.3 196,623 + GFF196 0.64 +0.0 196,623 + GFF196 0.64 +0.6 196,623 + GFF196 0.64 +0.4 196,623 + GFF196 0.64 -1.5 196,623 + GFF196 0.64 -0.4 196,623 + GFF196 0.64 -0.4 196,623 + GFF196 0.64 +0.1 196,623 + GFF196 0.64 +0.2 196,623 + GFF196 0.64 -0.5 196,624 - GFF196 0.64 +0.4 196,624 - GFF196 0.64 +0.3 196,624 - GFF196 0.64 -1.3 196,624 - GFF196 0.64 -2.3 196,624 - GFF196 0.64 -1.8 196,756 + GFF196 0.79 +1.6 196,825 - GFF196 0.86 +0.0 196,825 - GFF196 0.86 -1.0 196,904 - +0.0 196,922 + -0.5 196,922 + -0.2 196,922 + +0.0 196,926 + -0.3 196,926 + -0.1 196,927 - +0.3 196,940 + +0.4 197,135 + -1.2 197,135 + +0.0 197,135 + -0.5 197,135 + -1.5 197,135 + +0.7 197,135 + -1.0 197,136 - -0.0 197,136 - -1.3 197,136 - +0.4 197,136 - +0.0 197,136 - -0.2 197,136 - -1.5 197,136 - +0.3 197,136 - +1.0 197,215 + +0.6 197,216 - -1.3 197,216 - -1.3 197,251 + +0.2 197,251 + -1.2 197,252 - -1.3 197,283 + -0.4 197,283 + -1.0 197,284 - -1.3 197,321 - +0.6 197,333 - -0.3 197,335 + -0.1 197,352 - -2.1 197,374 + -0.2 197,378 + -1.5 197,388 + +0.6 197,388 + -1.0 197,389 - -0.3 197,389 - +1.3 197,431 + -1.5 197,432 - -0.5 197,432 - -1.0 197,495 + +0.6 197,495 + +0.0 197,496 - -0.8 197,499 + -1.0 197,511 + -0.6 197,511 + -1.3 197,511 + -0.9 197,511 + +0.3 197,512 - -0.2 197,512 - -0.4 197,533 + -0.7 197,533 + +0.0 197,533 + -0.2 197,537 + -0.0 197,537 + -2.2 197,537 + +0.0 197,537 + -1.3 197,538 - -1.5 197,627 + GFF197 0.42 -0.5 197,627 + GFF197 0.42 +0.1 197,627 + GFF197 0.42 -1.8 197,628 - GFF197 0.43 -0.2 197,717 + GFF197 0.79 -0.6 197,717 + GFF197 0.79 -0.8 197,884 + +1.0
Or see this region's nucleotide sequence