Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1880 and GFF1881 are separated by 327 nucleotides GFF1881 and GFF1882 are separated by 297 nucleotides GFF1882 and GFF1883 are separated by 201 nucleotides GFF1883 and GFF1884 are separated by 405 nucleotides
GFF1880 - Na(+)/H(+) antiporter NhaA, at 529,077 to 530,234
GFF1880
GFF1881 - hypothetical protein, at 530,562 to 530,765
GFF1881
GFF1882 - hypothetical protein, at 531,063 to 531,299
GFF1882
GFF1883 - hypothetical protein, at 531,501 to 531,845
GFF1883
GFF1884 - hypothetical protein, at 532,251 to 532,856
GFF1884
Position (kb) 531
532 Strain fitness (log2 ratio) -2
-1
0
1 at 530.315 kb on + strand at 530.316 kb on - strand at 530.318 kb on - strand at 530.351 kb on + strand at 530.369 kb on + strand at 530.369 kb on + strand at 530.370 kb on - strand at 530.382 kb on - strand at 530.427 kb on + strand at 530.427 kb on + strand at 530.427 kb on + strand at 530.427 kb on + strand at 530.427 kb on + strand at 530.427 kb on + strand at 530.427 kb on + strand at 530.427 kb on + strand at 530.427 kb on + strand at 530.427 kb on + strand at 530.427 kb on + strand at 530.427 kb on + strand at 530.427 kb on + strand at 530.427 kb on + strand at 530.427 kb on + strand at 530.427 kb on + strand at 530.427 kb on + strand at 530.427 kb on + strand at 530.427 kb on + strand at 530.427 kb on + strand at 530.427 kb on + strand at 530.427 kb on + strand at 530.428 kb on - strand at 530.428 kb on - strand at 530.428 kb on - strand at 530.428 kb on - strand at 530.428 kb on - strand at 530.428 kb on - strand at 530.428 kb on - strand at 530.428 kb on - strand at 530.428 kb on - strand at 530.428 kb on - strand at 530.428 kb on - strand at 530.428 kb on - strand at 530.428 kb on - strand at 530.428 kb on - strand at 530.428 kb on - strand at 530.428 kb on - strand at 530.442 kb on + strand at 530.443 kb on - strand at 530.443 kb on - strand at 530.460 kb on + strand at 530.461 kb on - strand at 530.525 kb on + strand at 530.571 kb on + strand at 530.668 kb on + strand, within GFF1881 at 530.668 kb on + strand, within GFF1881 at 530.669 kb on - strand, within GFF1881 at 530.680 kb on - strand, within GFF1881 at 530.680 kb on - strand, within GFF1881 at 530.694 kb on + strand, within GFF1881 at 530.694 kb on + strand, within GFF1881 at 530.694 kb on + strand, within GFF1881 at 530.694 kb on + strand, within GFF1881 at 530.695 kb on - strand, within GFF1881 at 530.751 kb on - strand at 530.753 kb on - strand at 530.765 kb on + strand at 530.766 kb on - strand at 530.825 kb on + strand at 530.825 kb on + strand at 530.825 kb on + strand at 530.825 kb on + strand at 530.825 kb on + strand at 530.825 kb on + strand at 530.825 kb on + strand at 530.825 kb on + strand at 530.826 kb on - strand at 530.826 kb on - strand at 530.826 kb on - strand at 530.826 kb on - strand at 530.826 kb on - strand at 530.838 kb on + strand at 530.844 kb on + strand at 530.890 kb on - strand at 531.067 kb on + strand at 531.067 kb on + strand at 531.067 kb on + strand at 531.068 kb on - strand at 531.068 kb on - strand at 531.068 kb on - strand at 531.068 kb on - strand at 531.068 kb on - strand at 531.068 kb on - strand at 531.068 kb on - strand at 531.084 kb on - strand at 531.140 kb on + strand, within GFF1882 at 531.141 kb on - strand, within GFF1882 at 531.141 kb on - strand, within GFF1882 at 531.167 kb on + strand, within GFF1882 at 531.167 kb on + strand, within GFF1882 at 531.167 kb on + strand, within GFF1882 at 531.168 kb on - strand, within GFF1882 at 531.409 kb on + strand at 531.410 kb on - strand at 531.641 kb on - strand, within GFF1883 at 531.695 kb on + strand, within GFF1883 at 531.695 kb on + strand, within GFF1883 at 531.695 kb on + strand, within GFF1883 at 531.695 kb on + strand, within GFF1883 at 531.695 kb on + strand, within GFF1883 at 531.720 kb on - strand, within GFF1883 at 531.726 kb on + strand, within GFF1883 at 531.813 kb on + strand at 531.813 kb on + strand at 531.873 kb on + strand at 531.873 kb on + strand at 531.873 kb on + strand at 531.874 kb on - strand at 531.874 kb on - strand at 531.874 kb on - strand at 531.922 kb on + strand at 531.922 kb on + strand at 531.922 kb on + strand at 531.941 kb on + strand at 532.063 kb on + strand at 532.063 kb on + strand at 532.064 kb on - strand at 532.064 kb on - strand at 532.064 kb on - strand at 532.074 kb on - strand at 532.077 kb on + strand at 532.077 kb on + strand at 532.077 kb on + strand at 532.077 kb on + strand at 532.077 kb on + strand at 532.077 kb on + strand at 532.077 kb on + strand at 532.077 kb on + strand at 532.077 kb on + strand at 532.077 kb on + strand at 532.078 kb on - strand at 532.078 kb on - strand at 532.078 kb on - strand at 532.078 kb on - strand at 532.078 kb on - strand at 532.078 kb on - strand at 532.078 kb on - strand at 532.078 kb on - strand at 532.079 kb on + strand at 532.079 kb on + strand at 532.080 kb on - strand at 532.080 kb on - strand at 532.089 kb on + strand at 532.090 kb on - strand at 532.102 kb on - strand at 532.141 kb on + strand at 532.142 kb on - strand at 532.142 kb on - strand at 532.161 kb on + strand at 532.161 kb on + strand at 532.162 kb on - strand at 532.219 kb on + strand at 532.276 kb on - strand at 532.276 kb on - strand at 532.289 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 530,315 + -0.3 530,316 - -0.9 530,318 - -0.5 530,351 + +0.8 530,369 + +0.2 530,369 + -0.5 530,370 - +0.7 530,382 - -0.0 530,427 + -0.8 530,427 + -0.0 530,427 + +0.7 530,427 + -0.4 530,427 + -0.4 530,427 + -0.7 530,427 + -0.0 530,427 + -0.1 530,427 + -0.5 530,427 + -1.0 530,427 + -1.0 530,427 + -0.4 530,427 + +0.1 530,427 + -1.0 530,427 + +0.1 530,427 + -1.0 530,427 + -0.2 530,427 + -0.2 530,427 + -0.1 530,427 + -0.6 530,427 + -0.6 530,427 + -1.4 530,428 - -0.0 530,428 - -1.0 530,428 - -0.5 530,428 - +0.1 530,428 - -0.9 530,428 - +0.7 530,428 - +0.2 530,428 - -1.0 530,428 - +0.5 530,428 - +0.5 530,428 - -0.0 530,428 - -1.0 530,428 - -1.6 530,428 - -1.9 530,428 - -0.0 530,428 - -1.6 530,442 + -1.8 530,443 - -0.5 530,443 - -0.5 530,460 + +0.2 530,461 - -0.4 530,525 + -1.1 530,571 + -1.2 530,668 + GFF1881 0.52 +0.1 530,668 + GFF1881 0.52 -1.4 530,669 - GFF1881 0.52 +0.3 530,680 - GFF1881 0.58 -1.0 530,680 - GFF1881 0.58 -1.1 530,694 + GFF1881 0.65 -1.2 530,694 + GFF1881 0.65 -0.8 530,694 + GFF1881 0.65 +1.0 530,694 + GFF1881 0.65 -0.0 530,695 - GFF1881 0.65 +0.7 530,751 - -1.2 530,753 - +0.8 530,765 + -0.9 530,766 - +0.8 530,825 + -0.4 530,825 + -0.0 530,825 + -0.6 530,825 + -0.5 530,825 + +0.2 530,825 + -1.0 530,825 + +0.3 530,825 + -0.3 530,826 - -1.4 530,826 - -0.5 530,826 - -1.0 530,826 - +0.2 530,826 - -0.1 530,838 + -1.6 530,844 + -1.4 530,890 - +0.5 531,067 + +0.1 531,067 + -2.7 531,067 + -0.9 531,068 - -0.4 531,068 - +0.1 531,068 - -0.9 531,068 - -1.0 531,068 - -1.5 531,068 - -1.3 531,068 - -0.4 531,084 - -0.0 531,140 + GFF1882 0.32 -1.6 531,141 - GFF1882 0.33 -0.6 531,141 - GFF1882 0.33 -1.5 531,167 + GFF1882 0.44 -0.6 531,167 + GFF1882 0.44 -2.2 531,167 + GFF1882 0.44 -0.2 531,168 - GFF1882 0.44 -0.4 531,409 + -1.0 531,410 - -0.2 531,641 - GFF1883 0.41 -1.4 531,695 + GFF1883 0.56 +0.2 531,695 + GFF1883 0.56 -1.0 531,695 + GFF1883 0.56 +0.4 531,695 + GFF1883 0.56 -1.1 531,695 + GFF1883 0.56 -1.9 531,720 - GFF1883 0.63 -0.2 531,726 + GFF1883 0.65 -1.5 531,813 + -0.8 531,813 + -1.2 531,873 + -0.6 531,873 + -0.5 531,873 + -0.9 531,874 - +0.6 531,874 - -1.4 531,874 - -1.4 531,922 + -0.3 531,922 + -0.8 531,922 + -2.2 531,941 + -0.8 532,063 + -1.6 532,063 + +0.5 532,064 - -0.9 532,064 - -1.4 532,064 - -0.4 532,074 - -0.6 532,077 + -0.6 532,077 + -0.4 532,077 + -1.4 532,077 + -0.9 532,077 + -1.9 532,077 + -0.3 532,077 + -1.0 532,077 + +0.8 532,077 + -0.2 532,077 + -0.9 532,078 - +0.5 532,078 - -0.9 532,078 - -1.0 532,078 - -1.5 532,078 - -2.1 532,078 - -1.4 532,078 - -0.0 532,078 - -1.0 532,079 + -0.9 532,079 + -1.0 532,080 - -0.0 532,080 - -1.0 532,089 + -1.4 532,090 - +0.3 532,102 - -0.0 532,141 + +0.2 532,142 - -1.0 532,142 - -0.8 532,161 + -1.4 532,161 + +0.1 532,162 - +1.6 532,219 + -0.4 532,276 - +0.2 532,276 - +0.1 532,289 + +0.6
Or see this region's nucleotide sequence