Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1876 and GFF1877 are separated by 297 nucleotides GFF1877 and GFF1878 overlap by 1 nucleotides GFF1878 and GFF1879 are separated by 26 nucleotides
GFF1876 - hypothetical protein, at 524,542 to 525,978
GFF1876
GFF1877 - hypothetical protein, at 526,276 to 526,833
GFF1877
GFF1878 - Protein tas, at 526,833 to 527,891
GFF1878
GFF1879 - Putative phospholipase A1, at 527,918 to 529,033
GFF1879
Position (kb) 526
527
528 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 525.924 kb on + strand at 525.929 kb on + strand at 525.929 kb on + strand at 525.929 kb on + strand at 525.930 kb on - strand at 525.930 kb on - strand at 525.930 kb on - strand at 525.930 kb on - strand at 525.930 kb on - strand at 525.930 kb on - strand at 525.930 kb on - strand at 525.956 kb on - strand at 525.956 kb on - strand at 525.956 kb on - strand at 525.963 kb on + strand at 525.966 kb on + strand at 525.966 kb on + strand at 525.967 kb on - strand at 525.987 kb on + strand at 526.007 kb on + strand at 526.007 kb on + strand at 526.007 kb on + strand at 526.007 kb on + strand at 526.007 kb on + strand at 526.008 kb on - strand at 526.008 kb on - strand at 526.008 kb on - strand at 526.008 kb on - strand at 526.027 kb on + strand at 526.028 kb on - strand at 526.028 kb on - strand at 526.028 kb on - strand at 526.038 kb on + strand at 526.039 kb on - strand at 526.039 kb on - strand at 526.050 kb on + strand at 526.050 kb on + strand at 526.051 kb on - strand at 526.051 kb on - strand at 526.060 kb on - strand at 526.060 kb on - strand at 526.065 kb on + strand at 526.066 kb on - strand at 526.066 kb on - strand at 526.080 kb on + strand at 526.081 kb on - strand at 526.081 kb on - strand at 526.086 kb on + strand at 526.087 kb on - strand at 526.128 kb on + strand at 526.181 kb on + strand at 526.182 kb on - strand at 526.182 kb on - strand at 526.182 kb on - strand at 526.212 kb on - strand at 526.212 kb on - strand at 526.212 kb on - strand at 526.212 kb on - strand at 526.217 kb on + strand at 526.245 kb on + strand at 526.245 kb on + strand at 526.245 kb on + strand at 526.245 kb on + strand at 526.246 kb on - strand at 526.246 kb on - strand at 526.246 kb on - strand at 526.246 kb on - strand at 526.246 kb on - strand at 526.248 kb on + strand at 526.248 kb on + strand at 526.248 kb on + strand at 526.248 kb on + strand at 526.248 kb on + strand at 526.248 kb on + strand at 526.249 kb on - strand at 526.249 kb on - strand at 526.249 kb on - strand at 526.249 kb on - strand at 526.268 kb on - strand at 526.292 kb on + strand at 526.292 kb on + strand at 526.293 kb on - strand at 526.312 kb on + strand at 526.383 kb on + strand, within GFF1877 at 526.383 kb on + strand, within GFF1877 at 526.387 kb on + strand, within GFF1877 at 526.388 kb on - strand, within GFF1877 at 526.388 kb on - strand, within GFF1877 at 526.415 kb on + strand, within GFF1877 at 526.415 kb on + strand, within GFF1877 at 526.419 kb on + strand, within GFF1877 at 526.420 kb on - strand, within GFF1877 at 526.517 kb on + strand, within GFF1877 at 526.571 kb on + strand, within GFF1877 at 526.632 kb on + strand, within GFF1877 at 526.632 kb on + strand, within GFF1877 at 526.632 kb on + strand, within GFF1877 at 526.632 kb on + strand, within GFF1877 at 526.632 kb on + strand, within GFF1877 at 526.632 kb on + strand, within GFF1877 at 526.632 kb on + strand, within GFF1877 at 526.632 kb on + strand, within GFF1877 at 526.632 kb on + strand, within GFF1877 at 526.632 kb on + strand, within GFF1877 at 526.632 kb on + strand, within GFF1877 at 526.632 kb on + strand, within GFF1877 at 526.632 kb on + strand, within GFF1877 at 526.633 kb on - strand, within GFF1877 at 526.633 kb on - strand, within GFF1877 at 526.633 kb on - strand, within GFF1877 at 526.633 kb on - strand, within GFF1877 at 526.633 kb on - strand, within GFF1877 at 526.633 kb on - strand, within GFF1877 at 526.633 kb on - strand, within GFF1877 at 526.633 kb on - strand, within GFF1877 at 526.674 kb on + strand, within GFF1877 at 526.823 kb on + strand at 526.823 kb on + strand at 526.826 kb on + strand at 526.826 kb on + strand at 526.826 kb on + strand at 526.827 kb on - strand at 526.844 kb on + strand at 526.899 kb on + strand at 526.899 kb on + strand at 526.899 kb on + strand at 526.899 kb on + strand at 526.899 kb on + strand at 526.900 kb on - strand at 526.900 kb on - strand at 526.900 kb on - strand at 526.964 kb on + strand, within GFF1878 at 526.976 kb on + strand, within GFF1878 at 527.203 kb on - strand, within GFF1878 at 527.218 kb on - strand, within GFF1878 at 527.259 kb on + strand, within GFF1878 at 527.314 kb on + strand, within GFF1878 at 527.314 kb on + strand, within GFF1878 at 527.314 kb on + strand, within GFF1878 at 527.318 kb on + strand, within GFF1878 at 527.384 kb on + strand, within GFF1878 at 527.384 kb on + strand, within GFF1878 at 527.387 kb on + strand, within GFF1878 at 527.423 kb on + strand, within GFF1878 at 527.472 kb on + strand, within GFF1878 at 527.472 kb on + strand, within GFF1878 at 527.472 kb on + strand, within GFF1878 at 527.474 kb on + strand, within GFF1878 at 527.474 kb on + strand, within GFF1878 at 527.547 kb on + strand, within GFF1878 at 527.583 kb on + strand, within GFF1878 at 527.583 kb on + strand, within GFF1878 at 527.583 kb on + strand, within GFF1878 at 527.583 kb on + strand, within GFF1878 at 527.583 kb on + strand, within GFF1878 at 527.583 kb on + strand, within GFF1878 at 527.583 kb on + strand, within GFF1878 at 527.584 kb on - strand, within GFF1878 at 527.680 kb on - strand, within GFF1878 at 527.794 kb on + strand at 527.794 kb on + strand at 527.794 kb on + strand at 527.794 kb on + strand at 527.794 kb on + strand at 527.889 kb on + strand at 527.890 kb on - strand at 527.904 kb on - strand at 527.904 kb on - strand at 527.923 kb on - strand at 528.049 kb on + strand, within GFF1879 at 528.049 kb on + strand, within GFF1879 at 528.049 kb on + strand, within GFF1879 at 528.049 kb on + strand, within GFF1879 at 528.049 kb on + strand, within GFF1879 at 528.275 kb on + strand, within GFF1879 at 528.275 kb on + strand, within GFF1879 at 528.275 kb on + strand, within GFF1879 at 528.275 kb on + strand, within GFF1879 at 528.275 kb on + strand, within GFF1879 at 528.276 kb on - strand, within GFF1879 at 528.290 kb on + strand, within GFF1879 at 528.406 kb on + strand, within GFF1879 at 528.406 kb on + strand, within GFF1879 at 528.464 kb on + strand, within GFF1879 at 528.526 kb on + strand, within GFF1879 at 528.526 kb on + strand, within GFF1879 at 528.526 kb on + strand, within GFF1879 at 528.526 kb on + strand, within GFF1879 at 528.526 kb on + strand, within GFF1879 at 528.530 kb on + strand, within GFF1879 at 528.601 kb on + strand, within GFF1879 at 528.601 kb on + strand, within GFF1879 at 528.604 kb on + strand, within GFF1879 at 528.677 kb on + strand, within GFF1879 at 528.677 kb on + strand, within GFF1879 at 528.677 kb on + strand, within GFF1879 at 528.710 kb on + strand, within GFF1879 at 528.710 kb on + strand, within GFF1879 at 528.710 kb on + strand, within GFF1879 at 528.710 kb on + strand, within GFF1879 at 528.710 kb on + strand, within GFF1879 at 528.711 kb on - strand, within GFF1879 at 528.712 kb on + strand, within GFF1879 at 528.712 kb on + strand, within GFF1879 at 528.712 kb on + strand, within GFF1879 at 528.712 kb on + strand, within GFF1879 at 528.712 kb on + strand, within GFF1879 at 528.712 kb on + strand, within GFF1879 at 528.713 kb on - strand, within GFF1879 at 528.785 kb on + strand, within GFF1879 at 528.785 kb on + strand, within GFF1879 at 528.785 kb on + strand, within GFF1879 at 528.785 kb on + strand, within GFF1879 at 528.785 kb on + strand, within GFF1879 at 528.785 kb on + strand, within GFF1879 at 528.785 kb on + strand, within GFF1879 at 528.785 kb on + strand, within GFF1879 at 528.787 kb on + strand, within GFF1879 at 528.787 kb on + strand, within GFF1879 at 528.787 kb on + strand, within GFF1879 at 528.788 kb on - strand, within GFF1879 at 528.887 kb on + strand, within GFF1879 at 528.887 kb on + strand, within GFF1879 at 528.887 kb on + strand, within GFF1879 at 528.887 kb on + strand, within GFF1879
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 525,924 + -1.4 525,929 + -1.4 525,929 + -1.3 525,929 + -0.9 525,930 - -0.2 525,930 - -1.0 525,930 - +0.2 525,930 - -2.2 525,930 - -0.8 525,930 - -0.8 525,930 - +1.0 525,956 - +0.1 525,956 - -1.6 525,956 - -1.4 525,963 + -2.2 525,966 + +0.2 525,966 + +1.1 525,967 - -0.5 525,987 + -1.9 526,007 + -2.4 526,007 + +0.5 526,007 + -1.0 526,007 + -0.9 526,007 + -1.4 526,008 - -0.8 526,008 - -0.7 526,008 - -1.7 526,008 - -2.0 526,027 + -1.4 526,028 - -0.0 526,028 - -1.0 526,028 - -0.9 526,038 + -1.4 526,039 - -0.1 526,039 - -1.0 526,050 + -0.4 526,050 + -2.4 526,051 - -1.5 526,051 - -0.2 526,060 - +1.4 526,060 - -1.2 526,065 + -0.0 526,066 - +0.6 526,066 - -0.1 526,080 + -1.0 526,081 - -0.4 526,081 - -1.0 526,086 + -0.0 526,087 - -1.2 526,128 + +0.2 526,181 + -0.3 526,182 - -1.0 526,182 - -1.4 526,182 - -1.2 526,212 - -1.4 526,212 - +0.5 526,212 - +0.2 526,212 - -1.2 526,217 + -1.9 526,245 + -1.4 526,245 + -0.5 526,245 + -1.0 526,245 + -0.5 526,246 - -0.4 526,246 - -1.4 526,246 - -0.0 526,246 - -0.0 526,246 - -0.8 526,248 + +0.5 526,248 + -0.4 526,248 + +1.3 526,248 + -0.7 526,248 + -1.2 526,248 + -0.0 526,249 - -2.0 526,249 - +0.1 526,249 - -1.0 526,249 - -0.0 526,268 - -2.6 526,292 + -1.4 526,292 + +0.6 526,293 - +0.3 526,312 + -0.4 526,383 + GFF1877 0.19 -1.0 526,383 + GFF1877 0.19 +1.0 526,387 + GFF1877 0.20 -0.5 526,388 - GFF1877 0.20 -2.4 526,388 - GFF1877 0.20 -0.0 526,415 + GFF1877 0.25 -1.0 526,415 + GFF1877 0.25 -0.8 526,419 + GFF1877 0.26 -0.0 526,420 - GFF1877 0.26 -0.9 526,517 + GFF1877 0.43 -0.0 526,571 + GFF1877 0.53 -0.5 526,632 + GFF1877 0.64 -1.6 526,632 + GFF1877 0.64 +0.5 526,632 + GFF1877 0.64 -0.0 526,632 + GFF1877 0.64 -0.0 526,632 + GFF1877 0.64 +0.4 526,632 + GFF1877 0.64 -0.9 526,632 + GFF1877 0.64 -0.5 526,632 + GFF1877 0.64 -0.6 526,632 + GFF1877 0.64 -0.8 526,632 + GFF1877 0.64 +0.5 526,632 + GFF1877 0.64 -2.0 526,632 + GFF1877 0.64 -0.4 526,632 + GFF1877 0.64 -0.2 526,633 - GFF1877 0.64 +1.3 526,633 - GFF1877 0.64 +0.4 526,633 - GFF1877 0.64 -0.2 526,633 - GFF1877 0.64 -3.1 526,633 - GFF1877 0.64 +0.5 526,633 - GFF1877 0.64 -0.1 526,633 - GFF1877 0.64 -0.0 526,633 - GFF1877 0.64 -1.6 526,674 + GFF1877 0.71 -0.5 526,823 + -1.6 526,823 + -1.0 526,826 + -1.4 526,826 + -0.0 526,826 + -0.7 526,827 - -1.6 526,844 + -0.0 526,899 + +0.5 526,899 + -0.0 526,899 + -0.0 526,899 + -3.0 526,899 + -1.0 526,900 - -1.0 526,900 - -1.6 526,900 - -1.0 526,964 + GFF1878 0.12 -0.4 526,976 + GFF1878 0.14 -0.4 527,203 - GFF1878 0.35 -1.6 527,218 - GFF1878 0.36 -1.0 527,259 + GFF1878 0.40 -1.0 527,314 + GFF1878 0.45 -2.4 527,314 + GFF1878 0.45 -1.2 527,314 + GFF1878 0.45 -0.3 527,318 + GFF1878 0.46 -0.6 527,384 + GFF1878 0.52 -2.6 527,384 + GFF1878 0.52 +0.2 527,387 + GFF1878 0.52 -1.0 527,423 + GFF1878 0.56 -0.0 527,472 + GFF1878 0.60 -1.4 527,472 + GFF1878 0.60 -2.3 527,472 + GFF1878 0.60 -0.0 527,474 + GFF1878 0.61 -1.6 527,474 + GFF1878 0.61 -0.9 527,547 + GFF1878 0.67 +0.0 527,583 + GFF1878 0.71 -1.6 527,583 + GFF1878 0.71 -0.5 527,583 + GFF1878 0.71 -0.9 527,583 + GFF1878 0.71 -1.0 527,583 + GFF1878 0.71 -0.0 527,583 + GFF1878 0.71 -1.0 527,583 + GFF1878 0.71 +0.2 527,584 - GFF1878 0.71 -1.0 527,680 - GFF1878 0.80 -2.2 527,794 + -1.6 527,794 + -0.0 527,794 + -1.0 527,794 + -0.6 527,794 + -0.4 527,889 + -1.6 527,890 - -1.4 527,904 - -1.2 527,904 - -0.6 527,923 - -1.6 528,049 + GFF1879 0.12 -1.4 528,049 + GFF1879 0.12 -1.0 528,049 + GFF1879 0.12 -2.2 528,049 + GFF1879 0.12 -0.6 528,049 + GFF1879 0.12 -1.4 528,275 + GFF1879 0.32 -1.0 528,275 + GFF1879 0.32 -0.6 528,275 + GFF1879 0.32 -2.0 528,275 + GFF1879 0.32 -1.2 528,275 + GFF1879 0.32 +1.0 528,276 - GFF1879 0.32 -1.0 528,290 + GFF1879 0.33 -2.0 528,406 + GFF1879 0.44 -0.9 528,406 + GFF1879 0.44 -2.4 528,464 + GFF1879 0.49 -0.6 528,526 + GFF1879 0.54 +0.3 528,526 + GFF1879 0.54 -0.8 528,526 + GFF1879 0.54 -0.9 528,526 + GFF1879 0.54 -0.8 528,526 + GFF1879 0.54 -1.9 528,530 + GFF1879 0.55 +0.6 528,601 + GFF1879 0.61 -0.6 528,601 + GFF1879 0.61 +0.1 528,604 + GFF1879 0.61 +0.4 528,677 + GFF1879 0.68 -1.0 528,677 + GFF1879 0.68 -0.4 528,677 + GFF1879 0.68 -0.6 528,710 + GFF1879 0.71 -1.0 528,710 + GFF1879 0.71 -1.2 528,710 + GFF1879 0.71 -0.3 528,710 + GFF1879 0.71 -0.5 528,710 + GFF1879 0.71 -1.4 528,711 - GFF1879 0.71 -2.6 528,712 + GFF1879 0.71 -1.9 528,712 + GFF1879 0.71 -0.4 528,712 + GFF1879 0.71 -0.2 528,712 + GFF1879 0.71 +0.6 528,712 + GFF1879 0.71 -0.9 528,712 + GFF1879 0.71 -0.3 528,713 - GFF1879 0.71 -1.6 528,785 + GFF1879 0.78 -1.0 528,785 + GFF1879 0.78 -0.3 528,785 + GFF1879 0.78 -0.4 528,785 + GFF1879 0.78 -0.4 528,785 + GFF1879 0.78 -1.1 528,785 + GFF1879 0.78 -1.0 528,785 + GFF1879 0.78 -0.0 528,785 + GFF1879 0.78 -0.2 528,787 + GFF1879 0.78 -2.0 528,787 + GFF1879 0.78 -0.5 528,787 + GFF1879 0.78 -1.4 528,788 - GFF1879 0.78 -1.0 528,887 + GFF1879 0.87 -0.0 528,887 + GFF1879 0.87 +0.1 528,887 + GFF1879 0.87 -0.0 528,887 + GFF1879 0.87 -0.3
Or see this region's nucleotide sequence