Strain Fitness in Methylophilus sp. DMC18 around GFF152

Experiment: Methanol and casaminos (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Methanol and casaminos (C)
151,681	+				-0.2
151,681	+				-0.6
151,681	+				-2.8
151,681	+				-2.3
151,729	+				-1.6
151,729	+				-0.3
151,729	+				-1.0
151,730	-				-0.8
151,730	-				-0.3
151,730	-				+0.0
151,780	-				-0.6
151,780	-				-1.0
151,780	-				-1.0
151,798	+				-0.4
151,874	-		GFF150	0.26	-0.6
151,874	-		GFF150	0.26	-1.0
151,874	-		GFF150	0.26	-0.6
151,874	-		GFF150	0.26	-0.8
151,874	-		GFF150	0.26	+0.0
151,883	-		GFF150	0.28	-0.4
151,883	-		GFF150	0.28	+0.1
151,883	-		GFF150	0.28	-0.3
151,913	-		GFF150	0.35	-0.6
151,924	-		GFF150	0.38	-0.1
151,935	-		GFF150	0.41	+0.0
151,935	-		GFF150	0.41	+0.8
151,935	-		GFF150	0.41	-0.6
151,993	+		GFF150	0.55	-0.6
151,994	-		GFF150	0.55	+0.4
151,999	+		GFF150	0.57	-0.3
152,000	-		GFF150	0.57	-1.9
152,000	-		GFF150	0.57	-1.0
152,005	+		GFF150	0.58	+0.6
152,006	-		GFF150	0.58	+0.3
152,006	-		GFF150	0.58	-0.5
152,028	+		GFF150	0.64	-1.6
152,071	-		GFF150	0.75	+0.6
152,071	-		GFF150	0.75	-0.2
152,071	-		GFF150	0.75	+0.0
152,135	+				+0.0
152,162	+				-1.9
152,162	+				+0.0
152,162	+				-0.3
152,162	+				-1.0
152,162	+				-0.8
152,162	+				-0.6
152,162	+				+0.2
152,162	+				+1.4
152,162	+				+0.0
152,162	+				-1.0
152,163	-				-0.9
152,163	-				-0.3
152,163	-				-1.1
152,163	-				-1.6
152,163	-				-1.0
152,163	-				-1.8
152,163	-				-0.6
152,163	-				-1.0
152,163	-				+0.4
152,163	-				-1.0
152,163	-				+0.3
152,163	-				-1.6
152,163	-				+0.0
152,163	-				-0.6
152,163	-				-1.2
152,163	-				-0.3
152,163	-				-0.7
152,163	-				-0.2
152,188	-				+0.6
152,410	-				-0.6
152,410	-				-0.5
152,467	+				-1.4
152,470	-				+0.2
152,502	+				+0.0
152,502	+				-1.1
152,502	+				-1.0
152,502	+				+0.0
152,502	+				+0.0
152,502	+				-0.4
152,503	-				+0.4
152,511	+				-0.3
152,511	+				-1.3
152,512	-				-0.7
152,512	-				+0.6
152,512	-				-1.8
152,517	+				-1.3
152,517	+				-0.3
152,518	-				-1.6
152,518	-				+0.8
152,518	-				+0.0
152,518	-				-1.4
152,527	+				-0.1
152,528	-				+0.3
152,542	+				+0.3
152,543	-				-0.6
152,543	-				-1.5
152,543	-				-1.9
152,543	-				+0.6
152,549	+				-0.6
152,550	-				+0.0
152,551	+				+0.7
152,552	-				-1.6
152,569	-				-0.1
152,569	-				-0.9
152,569	-				-0.3
152,642	+				+0.0
152,642	+				-0.8
152,642	+				+0.3
152,666	-				-0.1
152,682	+				-0.3
152,683	-				+1.0
152,691	+				-1.1
152,692	-				-0.2
152,700	+				+0.7
152,701	-				-1.3
152,701	-				-0.6
152,701	-				-0.1
152,719	+				-0.4
152,719	+				-1.7
152,720	-				-0.3
152,721	+				+0.0
152,721	+				-0.7
152,721	+				-0.8
152,722	-				-0.3
152,725	-				-0.4
152,725	-				-0.6
152,728	+				-1.4
152,728	+				-1.6
152,729	-				+0.5
152,729	-				+0.0
152,738	-				-1.8
152,773	+		GFF152	0.12	-1.0
152,773	+		GFF152	0.12	+0.7
152,774	-		GFF152	0.12	+0.4
152,805	+		GFF152	0.16	-0.2
152,813	-		GFF152	0.17	+0.3
152,893	-		GFF152	0.25	-0.2
152,893	-		GFF152	0.25	-0.2
152,893	-		GFF152	0.25	+0.6
152,896	+		GFF152	0.25	-0.6
152,896	+		GFF152	0.25	-1.0
152,942	+		GFF152	0.30	+0.2
152,942	+		GFF152	0.30	-1.8
152,942	+		GFF152	0.30	+0.5
152,942	+		GFF152	0.30	-1.6
152,942	+		GFF152	0.30	-0.6
152,943	-		GFF152	0.30	-0.6
152,943	-		GFF152	0.30	-0.8
152,943	-		GFF152	0.30	-2.1
152,943	-		GFF152	0.30	-0.3
152,943	-		GFF152	0.30	+0.3
152,943	-		GFF152	0.30	+0.7
152,966	+		GFF152	0.33	-0.4
152,967	-		GFF152	0.33	+0.3
152,968	+		GFF152	0.33	-1.3
152,969	-		GFF152	0.33	-1.1
152,969	-		GFF152	0.33	+0.7
152,969	-		GFF152	0.33	-1.7
152,969	-		GFF152	0.33	+0.1
152,969	-		GFF152	0.33	-0.9
152,988	+		GFF152	0.35	-1.0
152,988	+		GFF152	0.35	-0.8
152,988	+		GFF152	0.35	-1.0
152,989	-		GFF152	0.35	+0.4
153,010	+		GFF152	0.37	-0.4
153,010	+		GFF152	0.37	+1.0
153,010	+		GFF152	0.37	+0.8
153,011	-		GFF152	0.37	+0.3
153,011	-		GFF152	0.37	-0.8
153,020	-		GFF152	0.38	-0.6
153,020	-		GFF152	0.38	+0.0
153,029	-		GFF152	0.39	+0.0
153,029	-		GFF152	0.39	-1.3
153,035	+		GFF152	0.40	+0.0
153,098	+		GFF152	0.47	+0.8
153,098	+		GFF152	0.47	-0.2
153,098	+		GFF152	0.47	+1.0
153,098	+		GFF152	0.47	+0.9
153,099	-		GFF152	0.47	-1.2
153,099	-		GFF152	0.47	+0.4
153,099	-		GFF152	0.47	-0.3
153,099	-		GFF152	0.47	+0.0
153,099	-		GFF152	0.47	-0.4
153,175	+		GFF152	0.55	-0.3
153,175	+		GFF152	0.55	-0.4
153,176	-		GFF152	0.55	-0.3
153,196	+		GFF152	0.57	-0.4
153,197	-		GFF152	0.57	-1.0
153,197	-		GFF152	0.57	-1.3
153,202	+		GFF152	0.58	+0.6
153,203	-		GFF152	0.58	-0.4
153,203	-		GFF152	0.58	-0.8
153,216	-		GFF152	0.59	+0.7
153,246	+		GFF152	0.62	-0.3
153,247	-		GFF152	0.62	-2.1
153,284	+		GFF152	0.66	-0.7
153,285	-		GFF152	0.66	-0.2
153,285	-		GFF152	0.66	+0.6
153,285	-		GFF152	0.66	+0.8
153,285	-		GFF152	0.66	-1.0
153,285	-		GFF152	0.66	+1.0
153,285	-		GFF152	0.66	-1.0
153,286	+		GFF152	0.66	-0.2
153,286	+		GFF152	0.66	-1.1
153,286	+		GFF152	0.66	-1.3
153,286	+		GFF152	0.66	-0.8
153,286	+		GFF152	0.66	-2.1
153,286	+		GFF152	0.66	+0.0
153,286	+		GFF152	0.66	+0.2
153,286	+		GFF152	0.66	-0.7
153,286	+		GFF152	0.66	-0.8
153,287	-		GFF152	0.67	-1.0
153,287	-		GFF152	0.67	-1.0
153,287	-		GFF152	0.67	-0.0
153,287	-		GFF152	0.67	-1.4
153,287	-		GFF152	0.67	-0.9
153,287	-		GFF152	0.67	-0.3
153,287	-		GFF152	0.67	-0.1
153,287	-		GFF152	0.67	-0.5
153,287	-		GFF152	0.67	+0.2
153,287	-		GFF152	0.67	-2.3
153,287	-		GFF152	0.67	-0.3
153,287	-		GFF152	0.67	+0.6
153,304	+		GFF152	0.68	+0.0
153,304	+		GFF152	0.68	+0.5
153,305	-		GFF152	0.68	-1.1
153,305	-		GFF152	0.68	-1.7
153,305	-		GFF152	0.68	+0.0
153,370	-		GFF152	0.75	-0.9
153,387	+		GFF152	0.77	-0.2
153,388	-		GFF152	0.77	-0.5
153,394	+		GFF152	0.78	-1.0
153,397	+		GFF152	0.78	-1.1
153,398	-		GFF152	0.78	-0.3
153,410	+		GFF152	0.80	-0.4
153,411	-		GFF152	0.80	+0.2
153,424	-		GFF152	0.81	-0.0
153,424	-		GFF152	0.81	-1.6
153,459	-		GFF152	0.85	-1.1
153,476	+		GFF152	0.86	-0.6
153,476	+		GFF152	0.86	+0.3
153,476	+		GFF152	0.86	-0.6
153,477	-		GFF152	0.87	-1.4
153,485	-		GFF152	0.87	-1.0
153,491	-		GFF152	0.88	-0.4
153,491	-		GFF152	0.88	+0.7
153,561	+				-0.6
153,562	-				-0.3
153,562	-				-0.6
153,562	-				-0.2
153,562	-				-1.0
153,593	+				-1.8
153,614	+				+0.5
153,615	-				-1.4
153,615	-				-0.3
153,615	-				-0.9
153,615	-				+0.7
153,615	-				-1.1
153,615	-				-1.8
153,634	+				-1.1
153,635	-				-0.7
153,635	-				-0.2
153,635	-				+0.0
153,635	-				-1.1
153,635	-				-1.0
153,635	-				+0.1
153,694	+				+0.5
153,694	+				+0.2
153,694	+				-1.3
153,694	+				+0.0
153,694	+				-1.0
153,695	-				-1.3
153,725	+				-1.7
153,725	+				-0.6
153,725	+				-1.0
153,776	+				-0.8
153,777	-				-0.7
153,782	-				+0.6
153,806	+		GFF153	0.14	-0.4
153,806	+		GFF153	0.14	-0.1
153,807	-		GFF153	0.14	+0.1
153,807	-		GFF153	0.14	+1.6
153,807	-		GFF153	0.14	+0.2
153,807	-		GFF153	0.14	-0.3
153,842	-		GFF153	0.22	+1.0
153,842	-		GFF153	0.22	-0.2
153,962	+		GFF153	0.49	+0.3
153,992	-		GFF153	0.55	+0.5
154,009	+		GFF153	0.59	-0.4
154,009	+		GFF153	0.59	+0.6
154,009	+		GFF153	0.59	+0.2
154,009	+		GFF153	0.59	-0.1
154,010	-		GFF153	0.59	-1.6
154,010	-		GFF153	0.59	-0.3
154,010	-		GFF153	0.59	+0.6
154,012	+		GFF153	0.60	-0.3
154,027	+		GFF153	0.63	-1.6
154,028	-		GFF153	0.63	-0.3
154,031	+		GFF153	0.64	-0.9
154,031	+		GFF153	0.64	-0.0
154,031	+		GFF153	0.64	-0.2
154,032	-		GFF153	0.64	-2.3
154,032	-		GFF153	0.64	-1.1
154,032	-		GFF153	0.64	+0.4
154,032	-		GFF153	0.64	-1.6
154,032	-		GFF153	0.64	-0.7
154,032	-		GFF153	0.64	-1.0
154,032	-		GFF153	0.64	-0.4
154,046	+		GFF153	0.67	-0.8
154,047	-		GFF153	0.68	-0.6
154,064	+		GFF153	0.71	-0.2
154,065	-		GFF153	0.72	-0.6
154,125	+		GFF153	0.85	-0.4
154,126	-		GFF153	0.85	+0.3
154,131	+		GFF153	0.86	-1.9
154,131	+		GFF153	0.86	-0.9
154,131	+		GFF153	0.86	+0.4
154,131	+		GFF153	0.86	-0.6
154,131	+		GFF153	0.86	+0.0
154,132	-		GFF153	0.86	+0.3
154,132	-		GFF153	0.86	-1.1
154,132	-		GFF153	0.86	-1.3
154,162	-				-1.0
154,239	-				-0.5
154,239	-				-0.2
154,261	+				+0.9
154,262	-				-1.2
154,262	-				-1.6
154,262	-				-1.5
154,262	-				-0.7
154,262	-				-0.1
154,342	+				+1.2
154,342	+				+0.1
154,343	-				+0.2
154,343	-				-1.4
154,343	-				-1.4
154,349	-		GFF154	0.12	-0.6
154,349	-		GFF154	0.12	-0.7
154,359	+		GFF154	0.15	-1.7
154,359	+		GFF154	0.15	+1.6
154,359	+		GFF154	0.15	+0.4
154,359	+		GFF154	0.15	+0.0
154,359	+		GFF154	0.15	-1.3
154,359	+		GFF154	0.15	+0.3
154,360	-		GFF154	0.15	-2.1
154,360	-		GFF154	0.15	-1.3
154,360	-		GFF154	0.15	+0.0
154,360	-		GFF154	0.15	+0.6
154,360	-		GFF154	0.15	-1.3
154,360	-		GFF154	0.15	-0.6
154,360	-		GFF154	0.15	+0.7
154,360	-		GFF154	0.15	-0.9
154,360	-		GFF154	0.15	+1.0
154,395	+		GFF154	0.27	-2.0
154,395	+		GFF154	0.27	-0.6
154,396	-		GFF154	0.27	+0.3
154,396	-		GFF154	0.27	+0.7
154,437	+		GFF154	0.41	+0.0
154,438	-		GFF154	0.41	+0.0
154,438	-		GFF154	0.41	+0.3
154,438	-		GFF154	0.41	+0.3
154,451	+		GFF154	0.45	-2.2
154,452	+		GFF154	0.46	-1.0
154,481	+		GFF154	0.55	+0.8
154,491	+		GFF154	0.58	-0.6
154,491	+		GFF154	0.58	-1.3
154,492	-		GFF154	0.59	-0.3
154,504	+		GFF154	0.63	-0.3
154,504	+		GFF154	0.63	-0.4
154,504	+		GFF154	0.63	-0.3
154,505	-		GFF154	0.63	+0.0
154,505	-		GFF154	0.63	+0.8
154,505	-		GFF154	0.63	-0.2
154,527	+		GFF154	0.70	-0.6
154,538	+		GFF154	0.74	-2.1
154,538	+		GFF154	0.74	-0.8
154,539	-		GFF154	0.74	-0.1
154,539	-		GFF154	0.74	-0.9
154,539	-		GFF154	0.74	-0.6
154,540	+		GFF154	0.75	+0.4
154,540	+		GFF154	0.75	-1.4
154,540	+		GFF154	0.75	-0.6
154,540	+		GFF154	0.75	-0.4
154,540	+		GFF154	0.75	-0.9
154,540	+		GFF154	0.75	+0.0
154,540	+		GFF154	0.75	+0.8
154,540	+		GFF154	0.75	+0.0
154,540	+		GFF154	0.75	-2.1
154,540	+		GFF154	0.75	-1.3
154,540	+		GFF154	0.75	-1.6
154,541	-		GFF154	0.75	-0.2
154,541	-		GFF154	0.75	+0.4
154,541	-		GFF154	0.75	-0.7
154,541	-		GFF154	0.75	-1.0
154,541	-		GFF154	0.75	-0.4
154,541	-		GFF154	0.75	-0.4
154,541	-		GFF154	0.75	+0.0
154,541	-		GFF154	0.75	-1.0
154,541	-		GFF154	0.75	-0.1
154,541	-		GFF154	0.75	-0.9
154,541	-		GFF154	0.75	+0.3
154,541	-		GFF154	0.75	+0.0
154,541	-		GFF154	0.75	-0.1
154,549	+		GFF154	0.78	-1.3
154,561	+		GFF154	0.82	-0.6
154,561	+		GFF154	0.82	+0.0
154,561	+		GFF154	0.82	-0.5
154,561	+		GFF154	0.82	-1.8
154,562	-		GFF154	0.82	-1.0
154,585	-		GFF154	0.89	-1.3