Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1490 and GFF1491 are separated by 102 nucleotides GFF1491 and GFF1492 are separated by 58 nucleotides GFF1492 and GFF1493 are separated by 72 nucleotides
GFF1490 - Adenosylhomocysteinase, at 134,306 to 135,715
GFF1490
GFF1491 - hypothetical protein, at 135,818 to 136,168
GFF1491
GFF1492 - 5,10-methylenetetrahydrofolate reductase, at 136,227 to 137,054
GFF1492
GFF1493 - Protein Smg, at 137,127 to 137,594
GFF1493
Position (kb) 135
136
137 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 135.713 kb on + strand at 135.713 kb on + strand at 135.713 kb on + strand at 135.738 kb on + strand at 135.738 kb on + strand at 135.783 kb on + strand at 135.828 kb on + strand at 135.828 kb on + strand at 135.875 kb on + strand, within GFF1491 at 135.949 kb on + strand, within GFF1491 at 135.991 kb on + strand, within GFF1491 at 135.991 kb on + strand, within GFF1491 at 136.081 kb on + strand, within GFF1491 at 136.081 kb on + strand, within GFF1491 at 136.081 kb on + strand, within GFF1491 at 136.081 kb on + strand, within GFF1491 at 136.081 kb on + strand, within GFF1491 at 136.081 kb on + strand, within GFF1491 at 136.081 kb on + strand, within GFF1491 at 136.115 kb on + strand, within GFF1491 at 136.115 kb on + strand, within GFF1491 at 136.115 kb on + strand, within GFF1491 at 136.115 kb on + strand, within GFF1491 at 136.115 kb on + strand, within GFF1491 at 136.115 kb on + strand, within GFF1491 at 136.115 kb on + strand, within GFF1491 at 136.117 kb on + strand, within GFF1491 at 136.117 kb on + strand, within GFF1491 at 136.213 kb on + strand at 136.213 kb on + strand at 137.052 kb on + strand at 137.052 kb on + strand at 137.053 kb on - strand at 137.070 kb on + strand at 137.071 kb on - strand at 137.071 kb on - strand at 137.129 kb on - strand at 137.129 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 135,713 + -0.5 135,713 + -1.1 135,713 + +1.4 135,738 + -1.1 135,738 + -0.5 135,783 + -1.8 135,828 + -1.4 135,828 + -0.5 135,875 + GFF1491 0.16 -1.1 135,949 + GFF1491 0.37 -0.5 135,991 + GFF1491 0.49 -1.9 135,991 + GFF1491 0.49 +0.6 136,081 + GFF1491 0.75 -1.8 136,081 + GFF1491 0.75 -1.1 136,081 + GFF1491 0.75 -1.3 136,081 + GFF1491 0.75 -1.5 136,081 + GFF1491 0.75 -3.0 136,081 + GFF1491 0.75 -0.5 136,081 + GFF1491 0.75 -1.1 136,115 + GFF1491 0.85 +0.1 136,115 + GFF1491 0.85 -1.1 136,115 + GFF1491 0.85 -0.5 136,115 + GFF1491 0.85 -0.9 136,115 + GFF1491 0.85 -0.1 136,115 + GFF1491 0.85 -2.1 136,115 + GFF1491 0.85 -0.5 136,117 + GFF1491 0.85 +0.5 136,117 + GFF1491 0.85 -1.2 136,213 + -2.5 136,213 + -1.7 137,052 + +1.1 137,052 + +0.5 137,053 - -0.5 137,070 + -0.3 137,071 - -0.1 137,071 - -1.1 137,129 - +0.1 137,129 - -0.8
Or see this region's nucleotide sequence