Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1189 and GFF1190 are separated by 0 nucleotides GFF1190 and GFF1191 are separated by 3 nucleotides
GFF1189 - Cytoskeleton protein RodZ, at 440,736 to 442,010
GFF1189
GFF1190 - hypothetical protein, at 442,011 to 442,811
GFF1190
GFF1191 - Dual-specificity RNA methyltransferase RlmN, at 442,815 to 443,933
GFF1191
Position (kb) 442
443 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 442.079 kb on - strand at 442.082 kb on - strand at 442.082 kb on - strand at 442.105 kb on - strand, within GFF1190 at 442.105 kb on - strand, within GFF1190 at 442.105 kb on - strand, within GFF1190 at 442.105 kb on - strand, within GFF1190 at 442.105 kb on - strand, within GFF1190 at 442.105 kb on - strand, within GFF1190 at 442.105 kb on - strand, within GFF1190 at 442.167 kb on - strand, within GFF1190 at 442.167 kb on - strand, within GFF1190 at 442.232 kb on - strand, within GFF1190 at 442.232 kb on - strand, within GFF1190 at 442.405 kb on + strand, within GFF1190 at 442.436 kb on - strand, within GFF1190 at 442.436 kb on - strand, within GFF1190 at 442.436 kb on - strand, within GFF1190 at 442.537 kb on - strand, within GFF1190 at 442.559 kb on - strand, within GFF1190 at 442.703 kb on - strand, within GFF1190 at 442.759 kb on - strand at 442.831 kb on - strand at 442.831 kb on - strand at 442.923 kb on - strand at 442.923 kb on - strand at 442.954 kb on - strand, within GFF1191 at 442.954 kb on - strand, within GFF1191 at 442.954 kb on - strand, within GFF1191 at 442.958 kb on + strand, within GFF1191 at 442.959 kb on - strand, within GFF1191 at 443.120 kb on - strand, within GFF1191 at 443.120 kb on - strand, within GFF1191 at 443.158 kb on + strand, within GFF1191 at 443.248 kb on - strand, within GFF1191 at 443.248 kb on - strand, within GFF1191 at 443.248 kb on - strand, within GFF1191 at 443.341 kb on - strand, within GFF1191 at 443.442 kb on - strand, within GFF1191 at 443.442 kb on - strand, within GFF1191 at 443.508 kb on + strand, within GFF1191 at 443.509 kb on - strand, within GFF1191 at 443.661 kb on - strand, within GFF1191 at 443.661 kb on - strand, within GFF1191 at 443.796 kb on - strand, within GFF1191
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 442,079 - -0.9 442,082 - -0.9 442,082 - -3.2 442,105 - GFF1190 0.12 -0.2 442,105 - GFF1190 0.12 -1.1 442,105 - GFF1190 0.12 +0.2 442,105 - GFF1190 0.12 +0.7 442,105 - GFF1190 0.12 -0.7 442,105 - GFF1190 0.12 -0.3 442,105 - GFF1190 0.12 -1.5 442,167 - GFF1190 0.19 -1.3 442,167 - GFF1190 0.19 +0.1 442,232 - GFF1190 0.28 -0.9 442,232 - GFF1190 0.28 +0.1 442,405 + GFF1190 0.49 -0.9 442,436 - GFF1190 0.53 -0.9 442,436 - GFF1190 0.53 -1.5 442,436 - GFF1190 0.53 -0.9 442,537 - GFF1190 0.66 -0.8 442,559 - GFF1190 0.68 -0.9 442,703 - GFF1190 0.86 -0.7 442,759 - -0.9 442,831 - -1.1 442,831 - -1.9 442,923 - -1.7 442,923 - -0.9 442,954 - GFF1191 0.12 -0.9 442,954 - GFF1191 0.12 -0.7 442,954 - GFF1191 0.12 -0.7 442,958 + GFF1191 0.13 -1.3 442,959 - GFF1191 0.13 +0.1 443,120 - GFF1191 0.27 -2.3 443,120 - GFF1191 0.27 -1.7 443,158 + GFF1191 0.31 -1.3 443,248 - GFF1191 0.39 -1.3 443,248 - GFF1191 0.39 -0.9 443,248 - GFF1191 0.39 -1.4 443,341 - GFF1191 0.47 +0.1 443,442 - GFF1191 0.56 -2.1 443,442 - GFF1191 0.56 -2.3 443,508 + GFF1191 0.62 -1.3 443,509 - GFF1191 0.62 -1.3 443,661 - GFF1191 0.76 -0.9 443,661 - GFF1191 0.76 -0.9 443,796 - GFF1191 0.88 -1.3
Or see this region's nucleotide sequence