Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06249

Experiment: NL-CCM_agar

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_06249 and MPMX19_06250 are separated by 191 nucleotidesMPMX19_06250 and MPMX19_06251 overlap by 4 nucleotides MPMX19_06249: MPMX19_06249 - hypothetical protein, at 1 to 930 _06249 MPMX19_06250: MPMX19_06250 - hypothetical protein, at 1,122 to 1,751 _06250 MPMX19_06251: MPMX19_06251 - hypothetical protein, at 1,748 to 2,320 _06251 Position (kb) 0 1Strain fitness (log2 ratio) -1 0 1at 0.939 kb on + strandat 0.939 kb on + strandat 0.939 kb on + strandat 0.939 kb on + strandat 0.939 kb on + strandat 0.939 kb on + strandat 0.983 kb on + strandat 0.983 kb on + strandat 0.984 kb on - strandat 0.984 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NL-CCM_agar
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939 + -0.4
939 + -0.9
939 + +0.9
939 + -0.7
939 + -0.4
939 + -0.2
983 + -1.0
983 + -0.0
984 - -1.1
984 - -0.4

Or see this region's nucleotide sequence