Experiment: NL-CCM_agar
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03217 and MPMX19_03218 are separated by 488 nucleotides MPMX19_03218 and MPMX19_03219 are separated by 186 nucleotides
MPMX19_03217: MPMX19_03217 - 2-haloacrylate reductase, at 516,204 to 517,205
_03217
MPMX19_03218: MPMX19_03218 - Haloalkane dehalogenase, at 517,694 to 518,767
_03218
MPMX19_03219: MPMX19_03219 - putative ABC transporter ATP-binding protein YheS, at 518,954 to 520,552
_03219
Position (kb) 517
518
519 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 516.717 kb on + strand, within MPMX19_03217 at 516.718 kb on - strand, within MPMX19_03217 at 516.718 kb on - strand, within MPMX19_03217 at 516.718 kb on - strand, within MPMX19_03217 at 516.937 kb on - strand, within MPMX19_03217 at 517.052 kb on + strand, within MPMX19_03217 at 517.053 kb on - strand, within MPMX19_03217 at 517.053 kb on - strand, within MPMX19_03217 at 517.053 kb on - strand, within MPMX19_03217 at 517.142 kb on + strand at 517.143 kb on - strand at 517.236 kb on + strand at 517.344 kb on + strand at 517.365 kb on + strand at 517.365 kb on + strand at 517.365 kb on + strand at 517.365 kb on + strand at 517.365 kb on + strand at 517.365 kb on + strand at 517.365 kb on + strand at 517.365 kb on + strand at 517.365 kb on + strand at 517.365 kb on + strand at 517.365 kb on + strand at 517.365 kb on + strand at 517.365 kb on + strand at 517.365 kb on + strand at 517.365 kb on + strand at 517.365 kb on + strand at 517.365 kb on + strand at 517.366 kb on - strand at 517.366 kb on - strand at 517.366 kb on - strand at 517.366 kb on - strand at 517.366 kb on - strand at 517.366 kb on - strand at 517.366 kb on - strand at 517.366 kb on - strand at 517.366 kb on - strand at 517.366 kb on - strand at 517.547 kb on + strand at 517.547 kb on + strand at 517.547 kb on + strand at 517.548 kb on - strand at 517.548 kb on - strand at 517.548 kb on - strand at 517.587 kb on + strand at 517.587 kb on + strand at 517.587 kb on + strand at 517.588 kb on - strand at 517.626 kb on + strand at 517.626 kb on + strand at 517.627 kb on - strand at 517.627 kb on - strand at 517.627 kb on - strand at 517.627 kb on - strand at 517.627 kb on - strand at 517.627 kb on - strand at 517.715 kb on + strand at 517.716 kb on - strand at 517.791 kb on + strand at 517.792 kb on - strand at 517.815 kb on + strand, within MPMX19_03218 at 517.815 kb on + strand, within MPMX19_03218 at 517.815 kb on + strand, within MPMX19_03218 at 517.815 kb on + strand, within MPMX19_03218 at 517.816 kb on - strand, within MPMX19_03218 at 517.816 kb on - strand, within MPMX19_03218 at 517.816 kb on - strand, within MPMX19_03218 at 517.816 kb on - strand, within MPMX19_03218 at 517.816 kb on - strand, within MPMX19_03218 at 517.816 kb on - strand, within MPMX19_03218 at 517.816 kb on - strand, within MPMX19_03218 at 517.816 kb on - strand, within MPMX19_03218 at 517.920 kb on + strand, within MPMX19_03218 at 517.920 kb on + strand, within MPMX19_03218 at 517.920 kb on + strand, within MPMX19_03218 at 517.920 kb on + strand, within MPMX19_03218 at 517.920 kb on + strand, within MPMX19_03218 at 517.920 kb on + strand, within MPMX19_03218 at 517.920 kb on + strand, within MPMX19_03218 at 517.921 kb on - strand, within MPMX19_03218 at 517.921 kb on - strand, within MPMX19_03218 at 517.921 kb on - strand, within MPMX19_03218 at 517.921 kb on - strand, within MPMX19_03218 at 517.959 kb on + strand, within MPMX19_03218 at 517.959 kb on + strand, within MPMX19_03218 at 517.960 kb on - strand, within MPMX19_03218 at 517.960 kb on - strand, within MPMX19_03218 at 517.960 kb on - strand, within MPMX19_03218 at 518.086 kb on + strand, within MPMX19_03218 at 518.087 kb on - strand, within MPMX19_03218 at 518.087 kb on - strand, within MPMX19_03218 at 518.088 kb on + strand, within MPMX19_03218 at 518.088 kb on + strand, within MPMX19_03218 at 518.088 kb on + strand, within MPMX19_03218 at 518.089 kb on - strand, within MPMX19_03218 at 518.127 kb on + strand, within MPMX19_03218 at 518.128 kb on - strand, within MPMX19_03218 at 518.128 kb on - strand, within MPMX19_03218 at 518.128 kb on - strand, within MPMX19_03218 at 518.131 kb on - strand, within MPMX19_03218 at 518.131 kb on - strand, within MPMX19_03218 at 518.136 kb on + strand, within MPMX19_03218 at 518.137 kb on - strand, within MPMX19_03218 at 518.137 kb on - strand, within MPMX19_03218 at 518.137 kb on - strand, within MPMX19_03218 at 518.203 kb on - strand, within MPMX19_03218 at 518.284 kb on - strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.484 kb on + strand, within MPMX19_03218 at 518.484 kb on + strand, within MPMX19_03218 at 518.484 kb on + strand, within MPMX19_03218 at 518.485 kb on - strand, within MPMX19_03218 at 518.485 kb on - strand, within MPMX19_03218 at 518.542 kb on - strand, within MPMX19_03218 at 518.542 kb on - strand, within MPMX19_03218 at 518.769 kb on + strand at 518.769 kb on + strand at 518.769 kb on + strand at 518.769 kb on + strand at 518.769 kb on + strand at 518.769 kb on + strand at 518.769 kb on + strand at 518.769 kb on + strand at 518.770 kb on - strand at 518.770 kb on - strand at 518.770 kb on - strand at 518.770 kb on - strand at 518.770 kb on - strand at 518.770 kb on - strand at 518.770 kb on - strand at 518.770 kb on - strand at 518.789 kb on + strand at 518.789 kb on + strand at 518.819 kb on + strand at 518.819 kb on + strand at 518.819 kb on + strand at 518.819 kb on + strand at 518.819 kb on + strand at 518.820 kb on - strand at 518.820 kb on - strand at 518.820 kb on - strand at 518.820 kb on - strand at 518.862 kb on + strand at 518.862 kb on + strand at 518.862 kb on + strand at 518.862 kb on + strand at 518.862 kb on + strand at 518.863 kb on - strand at 518.863 kb on - strand at 518.863 kb on - strand at 518.891 kb on + strand at 518.891 kb on + strand at 518.891 kb on + strand at 518.892 kb on - strand at 518.955 kb on + strand at 518.955 kb on + strand at 518.955 kb on + strand at 518.955 kb on + strand at 518.956 kb on - strand at 519.057 kb on + strand at 519.057 kb on + strand at 519.057 kb on + strand at 519.057 kb on + strand at 519.057 kb on + strand at 519.058 kb on - strand at 519.058 kb on - strand at 519.058 kb on - strand at 519.058 kb on - strand at 519.416 kb on + strand, within MPMX19_03219 at 519.416 kb on + strand, within MPMX19_03219 at 519.416 kb on + strand, within MPMX19_03219 at 519.416 kb on + strand, within MPMX19_03219 at 519.416 kb on + strand, within MPMX19_03219 at 519.416 kb on + strand, within MPMX19_03219 at 519.417 kb on - strand, within MPMX19_03219 at 519.417 kb on - strand, within MPMX19_03219 at 519.417 kb on - strand, within MPMX19_03219 at 519.417 kb on - strand, within MPMX19_03219
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM_agar remove 516,717 + MPMX19_03217 0.51 -0.5 516,718 - MPMX19_03217 0.51 -2.0 516,718 - MPMX19_03217 0.51 -1.2 516,718 - MPMX19_03217 0.51 -0.6 516,937 - MPMX19_03217 0.73 -1.9 517,052 + MPMX19_03217 0.85 -0.5 517,053 - MPMX19_03217 0.85 -0.4 517,053 - MPMX19_03217 0.85 -0.5 517,053 - MPMX19_03217 0.85 -0.4 517,142 + -0.3 517,143 - +0.0 517,236 + -0.3 517,344 + -0.1 517,365 + -0.0 517,365 + -1.6 517,365 + -0.3 517,365 + +0.1 517,365 + -0.3 517,365 + -1.3 517,365 + -1.0 517,365 + +0.3 517,365 + -0.9 517,365 + +0.7 517,365 + +0.6 517,365 + -1.6 517,365 + -0.2 517,365 + +0.3 517,365 + +0.5 517,365 + +0.1 517,365 + -1.9 517,366 - -2.2 517,366 - +0.9 517,366 - -0.9 517,366 - +0.7 517,366 - -1.3 517,366 - -0.5 517,366 - +0.1 517,366 - -0.9 517,366 - -0.6 517,366 - -0.3 517,547 + -2.5 517,547 + +0.5 517,547 + +0.3 517,548 - -2.0 517,548 - -1.4 517,548 - -0.3 517,587 + -0.8 517,587 + +0.7 517,587 + -0.8 517,588 - +0.1 517,626 + -1.0 517,626 + -0.5 517,627 - -1.1 517,627 - -0.8 517,627 - +0.3 517,627 - -0.5 517,627 - +0.1 517,627 - -0.5 517,715 + -0.2 517,716 - +0.1 517,791 + -1.0 517,792 - -0.3 517,815 + MPMX19_03218 0.11 -0.9 517,815 + MPMX19_03218 0.11 -0.5 517,815 + MPMX19_03218 0.11 +1.0 517,815 + MPMX19_03218 0.11 -0.8 517,816 - MPMX19_03218 0.11 -1.0 517,816 - MPMX19_03218 0.11 +0.1 517,816 - MPMX19_03218 0.11 -0.3 517,816 - MPMX19_03218 0.11 -1.5 517,816 - MPMX19_03218 0.11 -0.7 517,816 - MPMX19_03218 0.11 -1.0 517,816 - MPMX19_03218 0.11 -0.9 517,816 - MPMX19_03218 0.11 -0.8 517,920 + MPMX19_03218 0.21 -0.6 517,920 + MPMX19_03218 0.21 +1.2 517,920 + MPMX19_03218 0.21 -0.8 517,920 + MPMX19_03218 0.21 +0.4 517,920 + MPMX19_03218 0.21 +0.1 517,920 + MPMX19_03218 0.21 -1.3 517,920 + MPMX19_03218 0.21 -1.3 517,921 - MPMX19_03218 0.21 +0.4 517,921 - MPMX19_03218 0.21 +1.5 517,921 - MPMX19_03218 0.21 -0.5 517,921 - MPMX19_03218 0.21 -1.3 517,959 + MPMX19_03218 0.25 +0.3 517,959 + MPMX19_03218 0.25 +0.6 517,960 - MPMX19_03218 0.25 +0.1 517,960 - MPMX19_03218 0.25 -1.2 517,960 - MPMX19_03218 0.25 -0.6 518,086 + MPMX19_03218 0.36 -1.9 518,087 - MPMX19_03218 0.37 -0.6 518,087 - MPMX19_03218 0.37 +0.1 518,088 + MPMX19_03218 0.37 +0.2 518,088 + MPMX19_03218 0.37 -2.0 518,088 + MPMX19_03218 0.37 -0.5 518,089 - MPMX19_03218 0.37 +0.1 518,127 + MPMX19_03218 0.40 +0.8 518,128 - MPMX19_03218 0.40 -0.6 518,128 - MPMX19_03218 0.40 -1.6 518,128 - MPMX19_03218 0.40 +0.2 518,131 - MPMX19_03218 0.41 +1.1 518,131 - MPMX19_03218 0.41 +1.1 518,136 + MPMX19_03218 0.41 -0.6 518,137 - MPMX19_03218 0.41 +0.4 518,137 - MPMX19_03218 0.41 -0.6 518,137 - MPMX19_03218 0.41 -0.1 518,203 - MPMX19_03218 0.47 -0.0 518,284 - MPMX19_03218 0.55 -0.3 518,469 + MPMX19_03218 0.72 +0.4 518,469 + MPMX19_03218 0.72 -1.7 518,469 + MPMX19_03218 0.72 +0.7 518,469 + MPMX19_03218 0.72 -0.6 518,469 + MPMX19_03218 0.72 -1.3 518,469 + MPMX19_03218 0.72 -0.7 518,469 + MPMX19_03218 0.72 -0.0 518,469 + MPMX19_03218 0.72 -1.3 518,469 + MPMX19_03218 0.72 -0.7 518,469 + MPMX19_03218 0.72 +0.2 518,469 + MPMX19_03218 0.72 -0.3 518,469 + MPMX19_03218 0.72 -1.5 518,469 + MPMX19_03218 0.72 -1.6 518,469 + MPMX19_03218 0.72 -0.6 518,469 + MPMX19_03218 0.72 -2.8 518,469 + MPMX19_03218 0.72 -1.1 518,469 + MPMX19_03218 0.72 -2.1 518,469 + MPMX19_03218 0.72 -1.1 518,469 + MPMX19_03218 0.72 -1.5 518,469 + MPMX19_03218 0.72 -0.5 518,469 + MPMX19_03218 0.72 -0.5 518,469 + MPMX19_03218 0.72 -0.8 518,469 + MPMX19_03218 0.72 -0.5 518,469 + MPMX19_03218 0.72 -0.3 518,469 + MPMX19_03218 0.72 -0.6 518,469 + MPMX19_03218 0.72 -0.4 518,469 + MPMX19_03218 0.72 +1.1 518,469 + MPMX19_03218 0.72 -0.3 518,470 - MPMX19_03218 0.72 +0.5 518,470 - MPMX19_03218 0.72 -1.6 518,470 - MPMX19_03218 0.72 -0.5 518,470 - MPMX19_03218 0.72 +0.5 518,470 - MPMX19_03218 0.72 -0.0 518,470 - MPMX19_03218 0.72 -0.3 518,470 - MPMX19_03218 0.72 -0.9 518,470 - MPMX19_03218 0.72 -0.4 518,470 - MPMX19_03218 0.72 -0.2 518,470 - MPMX19_03218 0.72 +0.3 518,470 - MPMX19_03218 0.72 -1.5 518,470 - MPMX19_03218 0.72 -0.8 518,470 - MPMX19_03218 0.72 -0.9 518,470 - MPMX19_03218 0.72 +0.1 518,470 - MPMX19_03218 0.72 -0.0 518,470 - MPMX19_03218 0.72 +0.5 518,470 - MPMX19_03218 0.72 -1.0 518,470 - MPMX19_03218 0.72 -0.9 518,470 - MPMX19_03218 0.72 -0.6 518,470 - MPMX19_03218 0.72 -0.8 518,470 - MPMX19_03218 0.72 -1.0 518,470 - MPMX19_03218 0.72 +1.3 518,470 - MPMX19_03218 0.72 -0.5 518,470 - MPMX19_03218 0.72 +0.9 518,470 - MPMX19_03218 0.72 +1.5 518,470 - MPMX19_03218 0.72 -0.3 518,470 - MPMX19_03218 0.72 -1.3 518,470 - MPMX19_03218 0.72 -1.0 518,484 + MPMX19_03218 0.74 -0.8 518,484 + MPMX19_03218 0.74 +0.3 518,484 + MPMX19_03218 0.74 -2.5 518,485 - MPMX19_03218 0.74 +0.2 518,485 - MPMX19_03218 0.74 +1.5 518,542 - MPMX19_03218 0.79 -0.0 518,542 - MPMX19_03218 0.79 -0.3 518,769 + +0.5 518,769 + -0.5 518,769 + +0.7 518,769 + -0.5 518,769 + +0.0 518,769 + -1.8 518,769 + -2.0 518,769 + -1.0 518,770 - -0.3 518,770 - -0.8 518,770 - -1.0 518,770 - +0.3 518,770 - -1.5 518,770 - +0.4 518,770 - -1.2 518,770 - -0.6 518,789 + -0.0 518,789 + +0.7 518,819 + +0.3 518,819 + -0.5 518,819 + -0.5 518,819 + -0.8 518,819 + -0.7 518,820 - +0.2 518,820 - +0.1 518,820 - -1.3 518,820 - -1.2 518,862 + +0.5 518,862 + -0.6 518,862 + -0.8 518,862 + -1.5 518,862 + +1.1 518,863 - +0.1 518,863 - +0.6 518,863 - -0.4 518,891 + +0.5 518,891 + +0.4 518,891 + +0.2 518,892 - -1.1 518,955 + +0.3 518,955 + -0.3 518,955 + -0.0 518,955 + -0.5 518,956 - -2.4 519,057 + -1.2 519,057 + +0.3 519,057 + +1.2 519,057 + -1.0 519,057 + -0.6 519,058 - -0.8 519,058 - -0.6 519,058 - -0.9 519,058 - +0.2 519,416 + MPMX19_03219 0.29 -0.5 519,416 + MPMX19_03219 0.29 -0.2 519,416 + MPMX19_03219 0.29 +1.1 519,416 + MPMX19_03219 0.29 +0.9 519,416 + MPMX19_03219 0.29 -0.2 519,416 + MPMX19_03219 0.29 +0.1 519,417 - MPMX19_03219 0.29 -0.6 519,417 - MPMX19_03219 0.29 +0.9 519,417 - MPMX19_03219 0.29 -1.0 519,417 - MPMX19_03219 0.29 -0.2
Or see this region's nucleotide sequence