Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01793

Experiment: NL-CCM_agar

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM_agar
1,878,158	+		MPMX19_01792	0.48	-0.4
1,878,158	+		MPMX19_01792	0.48	+0.7
1,878,158	+		MPMX19_01792	0.48	+0.1
1,878,158	+		MPMX19_01792	0.48	-1.6
1,878,158	+		MPMX19_01792	0.48	-0.2
1,878,159	-		MPMX19_01792	0.48	-0.8
1,878,159	-		MPMX19_01792	0.48	-0.3
1,878,159	-		MPMX19_01792	0.48	-1.4
1,878,159	-		MPMX19_01792	0.48	-1.4
1,878,159	-		MPMX19_01792	0.48	+0.9
1,878,159	-		MPMX19_01792	0.48	-2.2
1,878,159	-		MPMX19_01792	0.48	-0.8
1,878,159	-		MPMX19_01792	0.48	+0.2
1,878,159	-		MPMX19_01792	0.48	-0.7
1,878,159	-		MPMX19_01792	0.48	-0.3
1,878,323	+		MPMX19_01792	0.71	+1.6
1,878,323	+		MPMX19_01792	0.71	-2.0
1,878,323	+		MPMX19_01792	0.71	-0.0
1,878,323	+		MPMX19_01792	0.71	-0.0
1,878,324	-		MPMX19_01792	0.71	-0.4
1,878,324	-		MPMX19_01792	0.71	-1.4
1,878,324	-		MPMX19_01792	0.71	-0.8
1,878,324	-		MPMX19_01792	0.71	+0.6
1,878,324	-		MPMX19_01792	0.71	-0.3
1,878,498	+				+0.0
1,878,499	-				-0.8
1,878,545	+				+0.3
1,878,545	+				-1.6
1,878,545	+				-0.2
1,878,545	+				+0.1
1,878,546	-				-0.8
1,878,546	-				-0.0
1,878,637	-				+0.1
1,878,637	-				+0.6
1,878,637	-				-1.6
1,878,642	+				-0.4
1,878,642	+				-2.8
1,878,642	+				-2.5
1,878,643	-				-0.7
1,878,647	-				+0.7
1,878,691	+				-0.4
1,878,691	+				-1.5
1,878,691	+				-1.0
1,878,692	-				-0.4
1,878,692	-				-0.7
1,878,742	+				+0.8
1,878,742	+				-1.9
1,878,743	-				-1.8
1,878,743	-				-0.3
1,878,744	+				+1.0
1,878,745	-				+0.0
1,878,745	-				-0.0
1,878,745	-				-0.6
1,878,745	-				-0.6
1,878,745	-				+1.1
1,878,745	-				-0.1
1,878,745	-				+1.0
1,878,766	+				-0.0
1,878,766	+				-0.2
1,878,767	-				-1.0
1,878,788	+				-2.2
1,878,788	+				-0.4
1,878,788	+				-0.3
1,878,788	+				-0.3
1,878,788	+				-0.4
1,878,788	+				+0.1
1,878,788	+				-0.1
1,878,788	+				+0.3
1,878,789	-				-0.4
1,878,789	-				-0.0
1,878,797	-				-0.4
1,878,805	-				-1.0
1,879,229	+		MPMX19_01793	0.45	-0.4
1,879,229	+		MPMX19_01793	0.45	+1.1
1,879,229	+		MPMX19_01793	0.45	-0.9
1,879,229	+		MPMX19_01793	0.45	-1.0
1,879,229	+		MPMX19_01793	0.45	-0.3
1,879,229	+		MPMX19_01793	0.45	-2.0
1,879,230	-		MPMX19_01793	0.45	+0.7
1,879,230	-		MPMX19_01793	0.45	+0.7
1,879,230	-		MPMX19_01793	0.45	-1.0
1,879,230	-		MPMX19_01793	0.45	+1.3
1,879,230	-		MPMX19_01793	0.45	-1.9
1,879,230	-		MPMX19_01793	0.45	-1.2
1,879,230	-		MPMX19_01793	0.45	+0.1
1,879,230	-		MPMX19_01793	0.45	-1.3
1,879,230	-		MPMX19_01793	0.45	-1.3
1,879,230	-		MPMX19_01793	0.45	-0.0
1,879,301	+		MPMX19_01793	0.56	-1.1
1,879,301	+		MPMX19_01793	0.56	-1.3
1,879,301	+		MPMX19_01793	0.56	+0.3
1,879,301	+		MPMX19_01793	0.56	-0.4
1,879,301	+		MPMX19_01793	0.56	-0.8
1,879,301	+		MPMX19_01793	0.56	-1.2
1,879,301	+		MPMX19_01793	0.56	-0.8
1,879,302	-		MPMX19_01793	0.56	-0.2
1,879,302	-		MPMX19_01793	0.56	-1.2
1,879,302	-		MPMX19_01793	0.56	-0.3
1,879,302	-		MPMX19_01793	0.56	-1.0
1,879,302	-		MPMX19_01793	0.56	+0.3
1,879,592	+				+0.9
1,879,592	+				-0.7
1,879,592	+				-0.6
1,879,592	+				-2.0
1,879,592	+				-1.3
1,879,592	+				-0.2
1,879,592	+				-0.8
1,879,592	+				-0.6
1,879,592	+				-1.3
1,879,592	+				-0.8
1,879,593	-				-0.3
1,879,593	-				-2.8
1,879,644	+				-1.6
1,879,644	+				-1.0
1,879,644	+				-0.4
1,879,644	+				-1.2
1,879,644	+				-0.1
1,879,644	+				+0.6
1,879,644	+				+0.6
1,879,644	+				-0.3
1,879,644	+				-0.6
1,879,644	+				-0.6
1,879,645	-				-1.0
1,879,645	-				-0.6
1,879,645	-				-0.3
1,879,645	-				-0.0
1,879,645	-				-1.0
1,879,645	-				-1.5
1,879,645	-				+0.5
1,879,645	-				-0.8
1,879,649	+				-0.7
1,879,649	+				-0.4
1,879,649	+				+1.7
1,879,649	+				-0.7
1,879,649	+				-1.1
1,879,649	+				-0.4
1,879,649	+				-1.2
1,879,649	+				-0.4
1,879,649	+				+1.1
1,879,649	+				+0.1
1,879,649	+				-1.9
1,879,649	+				-0.8
1,879,649	+				-0.6
1,879,649	+				+0.2
1,879,649	+				-0.9
1,879,649	+				-1.8
1,879,649	+				-0.2
1,879,649	+				+0.6
1,879,649	+				-0.6
1,879,649	+				+1.1
1,879,649	+				+0.8
1,879,649	+				+0.3
1,879,649	+				-2.2
1,879,649	+				+0.3
1,879,649	+				-0.2
1,879,649	+				+0.6
1,879,649	+				+0.2
1,879,650	-				+0.5
1,879,650	-				-0.3
1,879,650	-				-0.4
1,879,650	-				+0.0
1,879,650	-				-1.9
1,879,650	-				-0.8
1,879,650	-				-0.9
1,879,650	-				+0.1
1,879,650	-				-1.3
1,879,650	-				+1.0
1,879,650	-				-0.6
1,879,650	-				+0.3
1,879,650	-				+1.6
1,879,650	-				-0.6
1,879,650	-				-0.2
1,879,650	-				-0.7
1,879,650	-				+0.3
1,879,650	-				-0.4
1,879,650	-				-0.6
1,879,650	-				-0.3
1,879,650	-				-1.1
1,879,650	-				-0.6
1,879,650	-				-1.0
1,879,650	-				-0.4
1,879,650	-				-0.8
1,879,650	-				-0.4
1,879,650	-				-1.3
1,879,650	-				-0.2
1,879,650	-				-0.6
1,879,650	-				+0.8
1,879,650	-				-0.1
1,879,650	-				-0.8
1,879,650	-				+0.7
1,879,651	+				-1.3
1,879,651	+				-0.6
1,879,652	-				+0.1
1,879,652	-				-0.7
1,879,652	-				-0.7
1,879,687	+				-1.0
1,879,688	-				-0.3
1,879,712	+				-0.2
1,879,712	+				+0.2
1,879,712	+				+0.3
1,879,712	+				-1.0
1,879,713	-				-0.4
1,879,713	-				-0.9
1,880,066	+		MPMX19_01794	0.62	-2.0
1,880,066	+		MPMX19_01794	0.62	+1.6
1,880,066	+		MPMX19_01794	0.62	+0.6
1,880,067	-		MPMX19_01794	0.62	+0.6
1,880,067	-		MPMX19_01794	0.62	-1.6
1,880,067	-		MPMX19_01794	0.62	-1.3
1,880,067	-		MPMX19_01794	0.62	-0.0
1,880,067	-		MPMX19_01794	0.62	-0.4
1,880,067	-		MPMX19_01794	0.62	+0.6
1,880,067	-		MPMX19_01794	0.62	-0.9
1,880,067	-		MPMX19_01794	0.62	-1.5
1,880,067	-		MPMX19_01794	0.62	-0.3
1,880,067	-		MPMX19_01794	0.62	-1.0
1,880,327	+				-1.5
1,880,328	-				+0.2
1,880,328	-				+0.4
1,880,328	-				-0.2
1,880,382	+				-0.9
1,880,383	-				+0.7
1,880,383	-				-1.0