Experiment: NL-CCM_agar
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00980 and MPMX19_00981 are separated by 233 nucleotides MPMX19_00981 and MPMX19_00982 are separated by 15 nucleotides MPMX19_00982 and MPMX19_00983 are separated by 39 nucleotides
MPMX19_00980: MPMX19_00980 - Methyl-accepting chemotaxis protein, at 1,019,194 to 1,020,882
_00980
MPMX19_00981: MPMX19_00981 - hypothetical protein, at 1,021,116 to 1,021,847
_00981
MPMX19_00982: MPMX19_00982 - Guanylate kinase, at 1,021,863 to 1,022,510
_00982
MPMX19_00983: MPMX19_00983 - hypothetical protein, at 1,022,550 to 1,023,446
_00983
Position (kb)
1021
1022
1023 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1020.969 kb on + strand at 1020.970 kb on - strand at 1020.985 kb on + strand at 1020.985 kb on + strand at 1020.986 kb on - strand at 1020.986 kb on - strand at 1020.986 kb on - strand at 1020.986 kb on - strand at 1020.986 kb on - strand at 1020.993 kb on + strand at 1020.993 kb on + strand at 1020.993 kb on + strand at 1020.993 kb on + strand at 1020.993 kb on + strand at 1020.993 kb on + strand at 1020.993 kb on + strand at 1020.993 kb on + strand at 1020.993 kb on + strand at 1020.993 kb on + strand at 1020.993 kb on + strand at 1020.993 kb on + strand at 1020.993 kb on + strand at 1020.994 kb on - strand at 1020.994 kb on - strand at 1020.994 kb on - strand at 1020.994 kb on - strand at 1020.994 kb on - strand at 1020.994 kb on - strand at 1020.994 kb on - strand at 1021.032 kb on + strand at 1021.032 kb on + strand at 1021.033 kb on - strand at 1021.074 kb on + strand at 1021.080 kb on + strand at 1021.081 kb on - strand at 1021.081 kb on - strand at 1021.081 kb on - strand at 1021.081 kb on - strand at 1021.089 kb on + strand at 1021.132 kb on - strand at 1021.209 kb on + strand, within MPMX19_00981 at 1021.209 kb on + strand, within MPMX19_00981 at 1021.209 kb on + strand, within MPMX19_00981 at 1021.210 kb on - strand, within MPMX19_00981 at 1021.210 kb on - strand, within MPMX19_00981 at 1021.210 kb on - strand, within MPMX19_00981 at 1021.210 kb on - strand, within MPMX19_00981 at 1021.210 kb on - strand, within MPMX19_00981 at 1021.210 kb on - strand, within MPMX19_00981 at 1021.210 kb on - strand, within MPMX19_00981 at 1021.671 kb on + strand, within MPMX19_00981 at 1021.672 kb on - strand, within MPMX19_00981 at 1021.672 kb on - strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.761 kb on + strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.762 kb on - strand, within MPMX19_00981 at 1021.764 kb on + strand, within MPMX19_00981 at 1021.765 kb on - strand, within MPMX19_00981 at 1021.820 kb on - strand at 1021.820 kb on - strand at 1021.845 kb on + strand at 1021.845 kb on + strand at 1021.845 kb on + strand at 1021.845 kb on + strand at 1021.845 kb on + strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.846 kb on - strand at 1021.850 kb on - strand at 1021.865 kb on - strand at 1021.865 kb on - strand at 1021.872 kb on - strand at 1023.377 kb on - strand at 1023.377 kb on - strand at 1023.377 kb on - strand at 1023.377 kb on - strand at 1023.490 kb on - strand at 1023.490 kb on - strand at 1023.490 kb on - strand at 1023.490 kb on - strand at 1023.490 kb on - strand at 1023.490 kb on - strand at 1023.490 kb on - strand at 1023.490 kb on - strand at 1023.490 kb on - strand at 1023.492 kb on - strand at 1023.492 kb on - strand at 1023.492 kb on - strand at 1023.492 kb on - strand at 1023.492 kb on - strand at 1023.492 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM_agar remove 1,020,969 + -2.0 1,020,970 - +0.3 1,020,985 + -0.8 1,020,985 + +0.2 1,020,986 - -0.8 1,020,986 - -0.3 1,020,986 - -0.0 1,020,986 - -2.1 1,020,986 - -0.3 1,020,993 + +0.6 1,020,993 + +0.1 1,020,993 + +0.2 1,020,993 + +0.2 1,020,993 + +0.1 1,020,993 + -1.9 1,020,993 + -0.8 1,020,993 + -0.1 1,020,993 + +0.4 1,020,993 + +0.0 1,020,993 + -1.7 1,020,993 + -1.2 1,020,993 + +0.7 1,020,994 - -0.1 1,020,994 - -0.5 1,020,994 - -1.1 1,020,994 - -0.7 1,020,994 - +0.0 1,020,994 - -1.0 1,020,994 - +0.1 1,021,032 + -0.9 1,021,032 + -1.1 1,021,033 - -0.8 1,021,074 + -0.1 1,021,080 + -0.2 1,021,081 - -0.5 1,021,081 - +0.7 1,021,081 - +0.9 1,021,081 - -0.0 1,021,089 + -0.4 1,021,132 - +0.0 1,021,209 + MPMX19_00981 0.13 -2.9 1,021,209 + MPMX19_00981 0.13 -0.7 1,021,209 + MPMX19_00981 0.13 -1.0 1,021,210 - MPMX19_00981 0.13 +0.1 1,021,210 - MPMX19_00981 0.13 +0.9 1,021,210 - MPMX19_00981 0.13 -1.7 1,021,210 - MPMX19_00981 0.13 -2.1 1,021,210 - MPMX19_00981 0.13 -0.5 1,021,210 - MPMX19_00981 0.13 -0.4 1,021,210 - MPMX19_00981 0.13 +0.5 1,021,671 + MPMX19_00981 0.76 +2.0 1,021,672 - MPMX19_00981 0.76 -1.4 1,021,672 - MPMX19_00981 0.76 -0.3 1,021,761 + MPMX19_00981 0.88 -0.5 1,021,761 + MPMX19_00981 0.88 -0.3 1,021,761 + MPMX19_00981 0.88 +0.0 1,021,761 + MPMX19_00981 0.88 -1.3 1,021,761 + MPMX19_00981 0.88 -0.2 1,021,761 + MPMX19_00981 0.88 +0.1 1,021,761 + MPMX19_00981 0.88 -1.6 1,021,761 + MPMX19_00981 0.88 +0.1 1,021,761 + MPMX19_00981 0.88 -1.1 1,021,761 + MPMX19_00981 0.88 -1.0 1,021,761 + MPMX19_00981 0.88 -1.6 1,021,761 + MPMX19_00981 0.88 +0.1 1,021,762 - MPMX19_00981 0.88 -1.5 1,021,762 - MPMX19_00981 0.88 -0.4 1,021,762 - MPMX19_00981 0.88 -0.3 1,021,762 - MPMX19_00981 0.88 +0.1 1,021,762 - MPMX19_00981 0.88 -0.1 1,021,762 - MPMX19_00981 0.88 -0.4 1,021,762 - MPMX19_00981 0.88 +0.1 1,021,762 - MPMX19_00981 0.88 -1.4 1,021,762 - MPMX19_00981 0.88 -0.5 1,021,762 - MPMX19_00981 0.88 +0.4 1,021,762 - MPMX19_00981 0.88 +0.0 1,021,764 + MPMX19_00981 0.89 -0.9 1,021,765 - MPMX19_00981 0.89 -1.7 1,021,820 - -0.0 1,021,820 - -0.7 1,021,845 + -0.5 1,021,845 + +0.3 1,021,845 + +0.5 1,021,845 + -0.5 1,021,845 + -1.5 1,021,846 - +0.0 1,021,846 - -0.7 1,021,846 - -0.9 1,021,846 - -0.8 1,021,846 - +0.1 1,021,846 - -2.4 1,021,846 - -0.4 1,021,846 - -1.3 1,021,846 - -0.0 1,021,846 - -0.1 1,021,850 - -0.3 1,021,865 - -0.5 1,021,865 - -1.0 1,021,872 - -1.1 1,023,377 - -1.6 1,023,377 - -0.9 1,023,377 - +1.0 1,023,377 - -0.3 1,023,490 - -1.2 1,023,490 - +0.4 1,023,490 - -0.3 1,023,490 - -0.2 1,023,490 - -0.9 1,023,490 - -0.3 1,023,490 - -1.1 1,023,490 - -1.5 1,023,490 - +0.7 1,023,492 - -0.9 1,023,492 - +0.0 1,023,492 - +0.0 1,023,492 - +0.2 1,023,492 - -0.4 1,023,492 - -0.3
Or see this region's nucleotide sequence