Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05357

Experiment: NL-CCM_agar

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM_agar
30,792	+				-0.6
30,792	+				+1.3
30,792	+				-0.5
30,793	-				-0.4
30,793	-				+1.4
30,793	-				+0.1
30,847	+				-0.2
30,847	+				-1.5
30,848	-				-1.5
30,848	-				-0.6
30,901	+				+0.8
30,902	-				-0.7
30,909	+				+1.6
30,909	+				-0.4
30,910	-				-0.4
30,914	+				-0.4
30,915	-				-0.6
30,986	+				-0.9
30,986	+				-0.7
30,987	-				-0.2
30,987	-				-2.0
30,987	-				-0.3
30,987	-				+0.4
30,987	-				-0.1
30,987	-				+0.0
30,987	-				-0.5
30,989	+				-0.8
30,990	-				+0.5
30,990	-				-0.9
30,990	-				-0.7
30,990	-				-1.0
30,990	-				-0.8
31,096	+				-0.4
31,096	+				+0.3
31,096	+				-1.1
31,097	-				-0.8
31,194	+				+1.0
31,194	+				-1.5
31,194	+				-1.0
31,194	+				-2.2
31,194	+				-1.5
31,194	+				-0.1
31,195	-				-2.1
31,195	-				+0.9
31,195	-				+0.0
31,457	+		MPMX19_05357	0.14	-1.1
31,458	-		MPMX19_05357	0.14	-0.5
31,458	-		MPMX19_05357	0.14	+0.5
31,483	+		MPMX19_05357	0.15	-0.5
31,483	+		MPMX19_05357	0.15	-0.4
31,483	+		MPMX19_05357	0.15	-2.4
31,483	+		MPMX19_05357	0.15	+0.2
31,483	+		MPMX19_05357	0.15	-0.8
31,483	+		MPMX19_05357	0.15	-1.6
31,483	+		MPMX19_05357	0.15	-1.3
31,483	+		MPMX19_05357	0.15	-0.2
31,483	+		MPMX19_05357	0.15	-0.2
31,484	-		MPMX19_05357	0.15	-1.7
31,484	-		MPMX19_05357	0.15	-1.1
31,484	-		MPMX19_05357	0.15	-1.0
31,484	-		MPMX19_05357	0.15	-2.2
31,484	-		MPMX19_05357	0.15	-0.8
31,484	-		MPMX19_05357	0.15	-2.0
31,484	-		MPMX19_05357	0.15	-0.7
32,250	+		MPMX19_05357	0.40	-1.6
32,250	+		MPMX19_05357	0.40	-0.8
32,250	+		MPMX19_05357	0.40	-0.2
32,250	+		MPMX19_05357	0.40	+0.3
32,250	+		MPMX19_05357	0.40	-1.6
32,250	+		MPMX19_05357	0.40	-1.7
32,250	+		MPMX19_05357	0.40	-1.0
32,250	+		MPMX19_05357	0.40	-1.3
32,251	-		MPMX19_05357	0.40	-2.1
32,251	-		MPMX19_05357	0.40	-1.0
32,251	-		MPMX19_05357	0.40	-0.5
32,251	-		MPMX19_05357	0.40	-0.7
32,251	-		MPMX19_05357	0.40	-1.2
32,251	-		MPMX19_05357	0.40	-0.2
32,510	+		MPMX19_05357	0.48	-0.8
32,510	+		MPMX19_05357	0.48	+0.1
32,510	+		MPMX19_05357	0.48	+0.9
32,510	+		MPMX19_05357	0.48	-1.5
32,510	+		MPMX19_05357	0.48	-0.6
32,511	-		MPMX19_05357	0.48	-0.5
32,511	-		MPMX19_05357	0.48	-0.5
32,771	+		MPMX19_05357	0.57	-1.2
32,771	+		MPMX19_05357	0.57	-1.0
32,771	+		MPMX19_05357	0.57	-1.4
32,771	+		MPMX19_05357	0.57	-2.2
32,771	+		MPMX19_05357	0.57	-0.0
32,771	+		MPMX19_05357	0.57	+0.1
32,771	+		MPMX19_05357	0.57	-2.0
32,771	+		MPMX19_05357	0.57	-0.4
32,772	-		MPMX19_05357	0.57	-0.2
32,772	-		MPMX19_05357	0.57	-2.1
32,772	-		MPMX19_05357	0.57	-0.2
32,772	-		MPMX19_05357	0.57	-0.6
32,772	-		MPMX19_05357	0.57	-1.4
32,772	-		MPMX19_05357	0.57	-0.7
32,825	+		MPMX19_05357	0.59	+0.3
32,825	+		MPMX19_05357	0.59	+0.6
32,825	+		MPMX19_05357	0.59	-0.4
32,825	+		MPMX19_05357	0.59	-0.5
32,825	+		MPMX19_05357	0.59	-0.2
32,825	+		MPMX19_05357	0.59	-2.2
32,826	-		MPMX19_05357	0.59	-2.5
32,826	-		MPMX19_05357	0.59	-1.4
32,826	-		MPMX19_05357	0.59	-0.3
32,826	-		MPMX19_05357	0.59	-0.7
32,861	+		MPMX19_05357	0.60	-1.8
32,862	-		MPMX19_05357	0.60	-1.6
33,074	+		MPMX19_05357	0.67	-0.4
33,074	+		MPMX19_05357	0.67	-0.7
33,074	+		MPMX19_05357	0.67	-0.3
33,075	-		MPMX19_05357	0.67	+0.6
33,075	-		MPMX19_05357	0.67	-0.5
33,075	-		MPMX19_05357	0.67	-0.4
33,075	-		MPMX19_05357	0.67	-0.7
33,075	-		MPMX19_05357	0.67	+0.6
33,075	-		MPMX19_05357	0.67	-0.1
33,251	+		MPMX19_05357	0.72	-1.1
33,252	-		MPMX19_05357	0.72	-0.8
33,252	-		MPMX19_05357	0.72	-1.2
33,252	-		MPMX19_05357	0.72	-1.2
33,520	+		MPMX19_05357	0.81	-0.9
33,520	+		MPMX19_05357	0.81	-2.1
33,520	+		MPMX19_05357	0.81	+0.6
33,520	+		MPMX19_05357	0.81	-2.2
33,520	+		MPMX19_05357	0.81	-0.6
33,521	-		MPMX19_05357	0.81	+0.0
33,521	-		MPMX19_05357	0.81	-2.4
33,521	-		MPMX19_05357	0.81	-1.3
33,521	-		MPMX19_05357	0.81	-1.5
33,521	-		MPMX19_05357	0.81	-1.3
33,521	-		MPMX19_05357	0.81	-1.2
33,521	-		MPMX19_05357	0.81	-0.5
33,521	-		MPMX19_05357	0.81	-0.3
33,521	-		MPMX19_05357	0.81	-1.1
33,521	-		MPMX19_05357	0.81	-1.5
33,521	-		MPMX19_05357	0.81	-0.6
33,521	-		MPMX19_05357	0.81	-1.4
33,521	-		MPMX19_05357	0.81	-0.3
33,735	+		MPMX19_05357	0.88	-1.5
33,735	+		MPMX19_05357	0.88	-1.5
33,735	+		MPMX19_05357	0.88	-1.3
33,735	+		MPMX19_05357	0.88	-1.2
33,735	+		MPMX19_05357	0.88	-0.6
33,735	+		MPMX19_05357	0.88	-0.8
33,735	+		MPMX19_05357	0.88	-0.4
33,735	+		MPMX19_05357	0.88	+0.2
33,735	+		MPMX19_05357	0.88	-1.2
33,735	+		MPMX19_05357	0.88	+0.5
33,736	-		MPMX19_05357	0.88	-1.2
33,736	-		MPMX19_05357	0.88	-0.2
33,736	-		MPMX19_05357	0.88	-0.5
33,736	-		MPMX19_05357	0.88	+0.1
33,736	-		MPMX19_05357	0.88	+0.4
33,736	-		MPMX19_05357	0.88	-0.5
33,780	-		MPMX19_05357	0.90	+0.2
33,885	+				+0.0
33,886	-				+0.6
33,886	-				-1.6
33,915	-				-1.0
33,915	-				-0.4
33,936	+				-1.1
34,025	-				-0.1
34,059	+				-0.3
34,103	-				-0.4
34,127	-				-0.2
34,127	-				-0.5
34,151	+				+0.1
34,200	+				+1.8
34,200	+				+0.3
34,200	+				+1.6
34,200	+				+1.4
34,201	-				+0.4
34,229	+				-0.1
34,229	+				+0.7
34,230	-				+1.0
34,230	-				-0.2
34,230	-				-1.1
34,230	-				-0.1
34,230	-				+0.9
34,235	+				+0.4
34,235	+				-2.3
34,235	+				+0.6
34,235	+				+0.3
34,235	+				-1.3
34,235	+				+0.8
34,236	-				-0.1
34,236	-				-1.4
34,370	+				-0.4
34,371	-				-0.6
34,371	-				-2.0
34,373	+				-1.6
34,374	-				-0.5
34,374	-				+1.6
34,374	-				-2.6
34,374	-				-1.1
34,505	+				-1.0
34,506	-				-0.7
34,533	+				+0.2
34,533	+				-1.2
34,533	+				-0.8
34,533	+				-1.0
34,534	-				+0.9
34,603	+		MPMX19_05358	0.27	-0.1
34,603	+		MPMX19_05358	0.27	-1.3
34,604	-		MPMX19_05358	0.28	-0.5
34,885	-				-1.3
34,920	+				-0.0
34,920	+				-0.8
34,920	+				+0.0
34,920	+				+1.6
34,920	+				+0.5
34,921	-				-0.4
34,921	-				-0.5
34,921	-				-1.4