Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00708

Experiment: NL-CCM_agar

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00707 and MPMX19_00708 are separated by 84 nucleotidesMPMX19_00708 and MPMX19_00709 are separated by 145 nucleotides MPMX19_00707: MPMX19_00707 - ATP-dependent zinc metalloprotease FtsH, at 728,187 to 730,124 _00707 MPMX19_00708: MPMX19_00708 - hypothetical protein, at 730,209 to 731,372 _00708 MPMX19_00709: MPMX19_00709 - Enoyl-[acyl-carrier-protein] reductase [NADH] FabI, at 731,518 to 732,366 _00709 Position (kb) 730 731 732Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 730.288 kb on + strandat 730.288 kb on + strandat 730.288 kb on + strandat 730.289 kb on - strandat 730.289 kb on - strandat 730.289 kb on - strandat 730.289 kb on - strandat 730.364 kb on - strand, within MPMX19_00708at 730.379 kb on - strand, within MPMX19_00708at 730.402 kb on + strand, within MPMX19_00708at 730.402 kb on + strand, within MPMX19_00708at 730.402 kb on + strand, within MPMX19_00708at 730.456 kb on + strand, within MPMX19_00708at 730.456 kb on + strand, within MPMX19_00708at 730.543 kb on + strand, within MPMX19_00708at 730.543 kb on + strand, within MPMX19_00708at 730.543 kb on + strand, within MPMX19_00708at 730.639 kb on + strand, within MPMX19_00708at 730.639 kb on + strand, within MPMX19_00708at 730.645 kb on + strand, within MPMX19_00708at 730.645 kb on + strand, within MPMX19_00708at 730.645 kb on + strand, within MPMX19_00708at 730.645 kb on + strand, within MPMX19_00708at 730.645 kb on + strand, within MPMX19_00708at 730.645 kb on + strand, within MPMX19_00708at 730.645 kb on + strand, within MPMX19_00708at 730.645 kb on + strand, within MPMX19_00708at 730.645 kb on + strand, within MPMX19_00708at 730.646 kb on - strand, within MPMX19_00708at 730.646 kb on - strand, within MPMX19_00708at 730.646 kb on - strand, within MPMX19_00708at 730.646 kb on - strand, within MPMX19_00708at 730.646 kb on - strand, within MPMX19_00708at 730.646 kb on - strand, within MPMX19_00708at 730.646 kb on - strand, within MPMX19_00708at 730.646 kb on - strand, within MPMX19_00708at 730.646 kb on - strand, within MPMX19_00708at 730.646 kb on - strand, within MPMX19_00708at 731.065 kb on + strand, within MPMX19_00708at 731.065 kb on + strand, within MPMX19_00708at 731.065 kb on + strand, within MPMX19_00708at 731.065 kb on + strand, within MPMX19_00708at 731.065 kb on + strand, within MPMX19_00708at 731.065 kb on + strand, within MPMX19_00708at 731.066 kb on - strand, within MPMX19_00708at 731.066 kb on - strand, within MPMX19_00708at 731.066 kb on - strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.113 kb on + strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.114 kb on - strand, within MPMX19_00708at 731.209 kb on + strand, within MPMX19_00708at 731.317 kb on + strandat 731.317 kb on + strandat 731.317 kb on + strandat 731.317 kb on + strandat 731.376 kb on + strandat 731.377 kb on - strandat 731.377 kb on - strandat 731.395 kb on + strandat 731.395 kb on + strandat 731.395 kb on + strandat 731.395 kb on + strandat 731.396 kb on - strandat 731.410 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NL-CCM_agar
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730,288 + -3.1
730,288 + -3.0
730,288 + -0.3
730,289 - -1.0
730,289 - -0.5
730,289 - -0.6
730,289 - -0.2
730,364 - MPMX19_00708 0.13 -0.4
730,379 - MPMX19_00708 0.15 -0.8
730,402 + MPMX19_00708 0.17 +0.5
730,402 + MPMX19_00708 0.17 -0.4
730,402 + MPMX19_00708 0.17 +0.2
730,456 + MPMX19_00708 0.21 -0.7
730,456 + MPMX19_00708 0.21 +0.7
730,543 + MPMX19_00708 0.29 -0.2
730,543 + MPMX19_00708 0.29 +0.4
730,543 + MPMX19_00708 0.29 -0.1
730,639 + MPMX19_00708 0.37 -0.8
730,639 + MPMX19_00708 0.37 -1.3
730,645 + MPMX19_00708 0.37 +0.3
730,645 + MPMX19_00708 0.37 -0.1
730,645 + MPMX19_00708 0.37 +1.8
730,645 + MPMX19_00708 0.37 -0.8
730,645 + MPMX19_00708 0.37 -0.7
730,645 + MPMX19_00708 0.37 -1.4
730,645 + MPMX19_00708 0.37 +1.4
730,645 + MPMX19_00708 0.37 -0.7
730,645 + MPMX19_00708 0.37 -0.1
730,646 - MPMX19_00708 0.38 -0.5
730,646 - MPMX19_00708 0.38 +0.6
730,646 - MPMX19_00708 0.38 +1.6
730,646 - MPMX19_00708 0.38 -0.6
730,646 - MPMX19_00708 0.38 -3.0
730,646 - MPMX19_00708 0.38 +0.1
730,646 - MPMX19_00708 0.38 -1.7
730,646 - MPMX19_00708 0.38 +1.8
730,646 - MPMX19_00708 0.38 -0.2
730,646 - MPMX19_00708 0.38 -1.1
731,065 + MPMX19_00708 0.74 -0.3
731,065 + MPMX19_00708 0.74 +0.8
731,065 + MPMX19_00708 0.74 -0.0
731,065 + MPMX19_00708 0.74 -1.9
731,065 + MPMX19_00708 0.74 -0.9
731,065 + MPMX19_00708 0.74 +0.6
731,066 - MPMX19_00708 0.74 -0.4
731,066 - MPMX19_00708 0.74 +0.4
731,066 - MPMX19_00708 0.74 -0.4
731,113 + MPMX19_00708 0.78 +0.6
731,113 + MPMX19_00708 0.78 -0.2
731,113 + MPMX19_00708 0.78 +0.0
731,113 + MPMX19_00708 0.78 -1.0
731,113 + MPMX19_00708 0.78 +1.1
731,113 + MPMX19_00708 0.78 -0.2
731,113 + MPMX19_00708 0.78 -0.1
731,113 + MPMX19_00708 0.78 -0.0
731,113 + MPMX19_00708 0.78 -0.1
731,113 + MPMX19_00708 0.78 -0.3
731,113 + MPMX19_00708 0.78 +0.7
731,113 + MPMX19_00708 0.78 -0.6
731,113 + MPMX19_00708 0.78 -1.2
731,113 + MPMX19_00708 0.78 +0.6
731,113 + MPMX19_00708 0.78 -1.7
731,113 + MPMX19_00708 0.78 +0.6
731,113 + MPMX19_00708 0.78 +0.8
731,114 - MPMX19_00708 0.78 +1.6
731,114 - MPMX19_00708 0.78 -0.2
731,114 - MPMX19_00708 0.78 +1.1
731,114 - MPMX19_00708 0.78 -0.2
731,114 - MPMX19_00708 0.78 +0.2
731,114 - MPMX19_00708 0.78 -0.2
731,114 - MPMX19_00708 0.78 -0.8
731,114 - MPMX19_00708 0.78 +0.3
731,114 - MPMX19_00708 0.78 +0.6
731,114 - MPMX19_00708 0.78 +0.1
731,114 - MPMX19_00708 0.78 -0.8
731,114 - MPMX19_00708 0.78 -0.1
731,114 - MPMX19_00708 0.78 +0.1
731,114 - MPMX19_00708 0.78 -0.3
731,114 - MPMX19_00708 0.78 -1.2
731,114 - MPMX19_00708 0.78 -0.6
731,114 - MPMX19_00708 0.78 -0.4
731,114 - MPMX19_00708 0.78 -0.0
731,114 - MPMX19_00708 0.78 +0.6
731,114 - MPMX19_00708 0.78 -1.0
731,114 - MPMX19_00708 0.78 -0.0
731,114 - MPMX19_00708 0.78 -1.2
731,114 - MPMX19_00708 0.78 -1.8
731,114 - MPMX19_00708 0.78 -0.9
731,114 - MPMX19_00708 0.78 -0.0
731,114 - MPMX19_00708 0.78 -0.2
731,114 - MPMX19_00708 0.78 -0.2
731,114 - MPMX19_00708 0.78 -1.0
731,209 + MPMX19_00708 0.86 -0.6
731,317 + -1.0
731,317 + -0.4
731,317 + -1.9
731,317 + +1.6
731,376 + +0.4
731,377 - +0.6
731,377 - +0.9
731,395 + -3.0
731,395 + -0.9
731,395 + -0.2
731,395 + -0.2
731,396 - -0.2
731,410 - -2.1

Or see this region's nucleotide sequence