Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04832

Experiment: NL-CCM_agar

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX19_04830 and MPMX19_04831 are separated by 80 nucleotidesMPMX19_04831 and MPMX19_04832 overlap by 1 nucleotidesMPMX19_04832 and MPMX19_04833 are separated by 2 nucleotides MPMX19_04830: MPMX19_04830 - FeS cluster assembly protein SufB, at 236,971 to 238,455 _04830 MPMX19_04831: MPMX19_04831 - putative ATP-dependent transporter SufC, at 238,536 to 239,288 _04831 MPMX19_04832: MPMX19_04832 - FeS cluster assembly protein SufD, at 239,288 to 240,655 _04832 MPMX19_04833: MPMX19_04833 - Cysteine desulfurase, at 240,658 to 241,920 _04833 Position (kb) 239 240 241Strain fitness (log2 ratio) -1 0 1at 240.653 kb on + strandat 240.653 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction NL-CCM_agar
remove
240,653 + -1.5
240,653 + -1.5

Or see this region's nucleotide sequence