Experiment: NL-CCM_agar
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04740 and MPMX19_04741 are separated by 346 nucleotides MPMX19_04741 and MPMX19_04742 overlap by 8 nucleotides
MPMX19_04740: MPMX19_04740 - hypothetical protein, at 130,776 to 131,810
_04740
MPMX19_04741: MPMX19_04741 - Formyltransferase/hydrolase complex Fhc subunit B, at 132,157 to 133,353
_04741
MPMX19_04742: MPMX19_04742 - Formyltransferase/hydrolase complex Fhc subunit A, at 133,346 to 135,034
_04742
Position (kb)
132
133
134 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 131.186 kb on - strand, within MPMX19_04740 at 131.186 kb on - strand, within MPMX19_04740 at 131.186 kb on - strand, within MPMX19_04740 at 131.596 kb on + strand, within MPMX19_04740 at 131.596 kb on + strand, within MPMX19_04740 at 131.596 kb on + strand, within MPMX19_04740 at 131.597 kb on - strand, within MPMX19_04740 at 131.597 kb on - strand, within MPMX19_04740 at 131.597 kb on - strand, within MPMX19_04740 at 131.597 kb on - strand, within MPMX19_04740 at 131.597 kb on - strand, within MPMX19_04740 at 131.597 kb on - strand, within MPMX19_04740 at 131.815 kb on + strand at 131.815 kb on + strand at 131.816 kb on - strand at 131.816 kb on - strand at 131.816 kb on - strand at 131.816 kb on - strand at 131.853 kb on + strand at 131.858 kb on - strand at 131.858 kb on - strand at 131.875 kb on + strand at 131.911 kb on - strand at 131.990 kb on - strand at 131.993 kb on + strand at 132.031 kb on + strand at 132.031 kb on + strand at 132.032 kb on - strand at 132.043 kb on + strand at 132.044 kb on - strand at 132.931 kb on + strand, within MPMX19_04741 at 132.931 kb on + strand, within MPMX19_04741 at 132.931 kb on + strand, within MPMX19_04741 at 132.931 kb on + strand, within MPMX19_04741 at 132.931 kb on + strand, within MPMX19_04741 at 132.931 kb on + strand, within MPMX19_04741 at 132.931 kb on + strand, within MPMX19_04741 at 132.931 kb on + strand, within MPMX19_04741 at 132.931 kb on + strand, within MPMX19_04741 at 132.931 kb on + strand, within MPMX19_04741 at 132.931 kb on + strand, within MPMX19_04741 at 132.932 kb on - strand, within MPMX19_04741 at 132.932 kb on - strand, within MPMX19_04741 at 132.932 kb on - strand, within MPMX19_04741 at 132.932 kb on - strand, within MPMX19_04741 at 132.932 kb on - strand, within MPMX19_04741 at 132.932 kb on - strand, within MPMX19_04741 at 132.932 kb on - strand, within MPMX19_04741 at 132.932 kb on - strand, within MPMX19_04741 at 132.932 kb on - strand, within MPMX19_04741 at 132.932 kb on - strand, within MPMX19_04741 at 132.950 kb on - strand, within MPMX19_04741 at 132.950 kb on - strand, within MPMX19_04741 at 132.950 kb on - strand, within MPMX19_04741 at 133.358 kb on + strand at 133.358 kb on + strand at 133.358 kb on + strand at 133.358 kb on + strand at 133.358 kb on + strand at 133.358 kb on + strand at 133.358 kb on + strand at 133.358 kb on + strand at 133.358 kb on + strand at 133.359 kb on - strand at 133.359 kb on - strand at 133.359 kb on - strand at 133.359 kb on - strand at 133.359 kb on - strand at 133.359 kb on - strand at 133.359 kb on - strand at 133.359 kb on - strand at 133.359 kb on - strand at 133.430 kb on + strand at 133.430 kb on + strand at 133.430 kb on + strand at 133.430 kb on + strand at 133.431 kb on - strand at 133.431 kb on - strand at 133.431 kb on - strand at 133.679 kb on + strand, within MPMX19_04742 at 133.680 kb on - strand, within MPMX19_04742 at 133.680 kb on - strand, within MPMX19_04742 at 133.695 kb on - strand, within MPMX19_04742 at 133.695 kb on - strand, within MPMX19_04742 at 133.695 kb on - strand, within MPMX19_04742 at 133.787 kb on + strand, within MPMX19_04742 at 133.787 kb on + strand, within MPMX19_04742 at 133.787 kb on + strand, within MPMX19_04742 at 133.787 kb on + strand, within MPMX19_04742 at 133.787 kb on + strand, within MPMX19_04742 at 133.788 kb on - strand, within MPMX19_04742 at 133.788 kb on - strand, within MPMX19_04742 at 133.788 kb on - strand, within MPMX19_04742 at 133.788 kb on - strand, within MPMX19_04742 at 133.862 kb on + strand, within MPMX19_04742 at 133.862 kb on + strand, within MPMX19_04742 at 133.863 kb on - strand, within MPMX19_04742 at 133.863 kb on - strand, within MPMX19_04742 at 133.863 kb on - strand, within MPMX19_04742 at 133.863 kb on - strand, within MPMX19_04742 at 133.863 kb on - strand, within MPMX19_04742 at 133.863 kb on - strand, within MPMX19_04742 at 133.863 kb on - strand, within MPMX19_04742 at 133.863 kb on - strand, within MPMX19_04742 at 134.168 kb on + strand, within MPMX19_04742 at 134.168 kb on + strand, within MPMX19_04742 at 134.168 kb on + strand, within MPMX19_04742 at 134.168 kb on + strand, within MPMX19_04742 at 134.168 kb on + strand, within MPMX19_04742 at 134.168 kb on + strand, within MPMX19_04742 at 134.168 kb on + strand, within MPMX19_04742 at 134.169 kb on - strand, within MPMX19_04742 at 134.169 kb on - strand, within MPMX19_04742 at 134.169 kb on - strand, within MPMX19_04742 at 134.169 kb on - strand, within MPMX19_04742 at 134.169 kb on - strand, within MPMX19_04742 at 134.169 kb on - strand, within MPMX19_04742 at 134.169 kb on - strand, within MPMX19_04742
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM_agar remove 131,186 - MPMX19_04740 0.40 -1.8 131,186 - MPMX19_04740 0.40 -0.5 131,186 - MPMX19_04740 0.40 +0.3 131,596 + MPMX19_04740 0.79 +2.0 131,596 + MPMX19_04740 0.79 -0.1 131,596 + MPMX19_04740 0.79 +0.5 131,597 - MPMX19_04740 0.79 -0.0 131,597 - MPMX19_04740 0.79 -0.7 131,597 - MPMX19_04740 0.79 +0.5 131,597 - MPMX19_04740 0.79 -0.1 131,597 - MPMX19_04740 0.79 -0.2 131,597 - MPMX19_04740 0.79 -0.8 131,815 + -0.6 131,815 + +0.4 131,816 - -0.4 131,816 - -1.1 131,816 - -0.1 131,816 - +0.5 131,853 + -1.3 131,858 - -1.3 131,858 - +1.0 131,875 + -0.8 131,911 - -0.1 131,990 - -1.1 131,993 + +0.5 132,031 + +0.0 132,031 + -1.2 132,032 - -0.6 132,043 + +0.3 132,044 - -1.5 132,931 + MPMX19_04741 0.65 -0.5 132,931 + MPMX19_04741 0.65 +0.6 132,931 + MPMX19_04741 0.65 -1.3 132,931 + MPMX19_04741 0.65 -0.8 132,931 + MPMX19_04741 0.65 +0.5 132,931 + MPMX19_04741 0.65 -0.2 132,931 + MPMX19_04741 0.65 +1.5 132,931 + MPMX19_04741 0.65 -1.0 132,931 + MPMX19_04741 0.65 +0.2 132,931 + MPMX19_04741 0.65 +0.3 132,931 + MPMX19_04741 0.65 +0.6 132,932 - MPMX19_04741 0.65 -0.5 132,932 - MPMX19_04741 0.65 -0.1 132,932 - MPMX19_04741 0.65 +0.4 132,932 - MPMX19_04741 0.65 -2.3 132,932 - MPMX19_04741 0.65 +0.1 132,932 - MPMX19_04741 0.65 -1.4 132,932 - MPMX19_04741 0.65 -1.1 132,932 - MPMX19_04741 0.65 +0.0 132,932 - MPMX19_04741 0.65 +0.8 132,932 - MPMX19_04741 0.65 +0.1 132,950 - MPMX19_04741 0.66 +1.0 132,950 - MPMX19_04741 0.66 +0.3 132,950 - MPMX19_04741 0.66 -1.1 133,358 + +0.6 133,358 + -1.2 133,358 + +0.5 133,358 + +1.9 133,358 + -1.8 133,358 + +0.2 133,358 + +0.2 133,358 + +0.5 133,358 + -0.2 133,359 - -0.3 133,359 - +0.7 133,359 - -0.8 133,359 - -0.1 133,359 - -1.0 133,359 - -0.5 133,359 - +0.7 133,359 - +0.7 133,359 - -1.2 133,430 + -0.5 133,430 + -1.0 133,430 + -1.4 133,430 + -0.2 133,431 - -1.3 133,431 - +0.9 133,431 - +0.4 133,679 + MPMX19_04742 0.20 -1.3 133,680 - MPMX19_04742 0.20 +1.1 133,680 - MPMX19_04742 0.20 -0.8 133,695 - MPMX19_04742 0.21 -0.8 133,695 - MPMX19_04742 0.21 +0.1 133,695 - MPMX19_04742 0.21 -0.6 133,787 + MPMX19_04742 0.26 -1.4 133,787 + MPMX19_04742 0.26 -0.7 133,787 + MPMX19_04742 0.26 +0.3 133,787 + MPMX19_04742 0.26 +0.9 133,787 + MPMX19_04742 0.26 -0.4 133,788 - MPMX19_04742 0.26 -0.5 133,788 - MPMX19_04742 0.26 -2.0 133,788 - MPMX19_04742 0.26 +0.1 133,788 - MPMX19_04742 0.26 -0.9 133,862 + MPMX19_04742 0.31 -1.1 133,862 + MPMX19_04742 0.31 -0.1 133,863 - MPMX19_04742 0.31 -2.1 133,863 - MPMX19_04742 0.31 +0.8 133,863 - MPMX19_04742 0.31 -0.2 133,863 - MPMX19_04742 0.31 +0.0 133,863 - MPMX19_04742 0.31 +0.2 133,863 - MPMX19_04742 0.31 -1.3 133,863 - MPMX19_04742 0.31 +0.4 133,863 - MPMX19_04742 0.31 -1.7 134,168 + MPMX19_04742 0.49 +0.9 134,168 + MPMX19_04742 0.49 +1.0 134,168 + MPMX19_04742 0.49 -0.5 134,168 + MPMX19_04742 0.49 +0.4 134,168 + MPMX19_04742 0.49 -1.3 134,168 + MPMX19_04742 0.49 -0.8 134,168 + MPMX19_04742 0.49 +0.5 134,169 - MPMX19_04742 0.49 -1.1 134,169 - MPMX19_04742 0.49 -0.8 134,169 - MPMX19_04742 0.49 -1.0 134,169 - MPMX19_04742 0.49 +1.0 134,169 - MPMX19_04742 0.49 +0.2 134,169 - MPMX19_04742 0.49 +1.5 134,169 - MPMX19_04742 0.49 +0.3
Or see this region's nucleotide sequence