Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02482

Experiment: NL-CCM_agar

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM_agar
2,601,503	+		MPMX19_02480	0.68	+0.7
2,601,503	+		MPMX19_02480	0.68	+0.0
2,601,503	+		MPMX19_02480	0.68	-1.9
2,601,503	+		MPMX19_02480	0.68	-0.3
2,601,503	+		MPMX19_02480	0.68	-0.7
2,601,503	+		MPMX19_02480	0.68	+0.9
2,601,503	+		MPMX19_02480	0.68	-0.0
2,601,503	+		MPMX19_02480	0.68	+0.4
2,601,504	-		MPMX19_02480	0.68	+0.3
2,601,504	-		MPMX19_02480	0.68	-0.3
2,601,504	-		MPMX19_02480	0.68	-0.0
2,601,641	+		MPMX19_02480	0.77	-1.0
2,601,641	+		MPMX19_02480	0.77	+1.1
2,601,641	+		MPMX19_02480	0.77	-0.5
2,601,641	+		MPMX19_02480	0.77	+0.0
2,601,642	-		MPMX19_02480	0.77	-0.1
2,601,642	-		MPMX19_02480	0.77	-0.1
2,601,642	-		MPMX19_02480	0.77	-0.1
2,601,650	+		MPMX19_02480	0.78	-1.3
2,601,651	-		MPMX19_02480	0.78	-0.6
2,601,651	-		MPMX19_02480	0.78	-0.1
2,601,776	+		MPMX19_02480	0.86	-0.6
2,601,776	+		MPMX19_02480	0.86	+0.3
2,601,776	+		MPMX19_02480	0.86	-0.1
2,601,776	+		MPMX19_02480	0.86	-2.1
2,601,776	+		MPMX19_02480	0.86	-1.3
2,601,776	+		MPMX19_02480	0.86	-0.6
2,601,776	+		MPMX19_02480	0.86	-2.4
2,601,777	-		MPMX19_02480	0.86	-0.3
2,601,983	+				-0.4
2,601,983	+				-0.4
2,601,984	-				+0.5
2,601,984	-				-0.3
2,602,307	+				+0.2
2,602,307	+				+1.4
2,602,315	+				+0.1
2,602,316	-				+0.1
2,602,316	-				-1.1
2,602,316	-				+0.1
2,602,406	-				+0.5
2,602,406	-				-0.4
2,602,406	-				-0.6
2,602,406	-				-0.0
2,602,540	+		MPMX19_02482	0.16	+2.1
2,602,558	+		MPMX19_02482	0.17	+0.1
2,602,558	+		MPMX19_02482	0.17	-1.7
2,602,558	+		MPMX19_02482	0.17	-1.3
2,602,717	+		MPMX19_02482	0.28	-1.3
2,602,717	+		MPMX19_02482	0.28	+1.3
2,602,718	-		MPMX19_02482	0.28	-1.4
2,602,822	+		MPMX19_02482	0.35	+2.5
2,602,822	+		MPMX19_02482	0.35	-1.1
2,602,822	+		MPMX19_02482	0.35	-0.4
2,602,823	-		MPMX19_02482	0.35	-0.6
2,602,823	-		MPMX19_02482	0.35	+0.4
2,602,823	-		MPMX19_02482	0.35	-1.3
2,602,823	-		MPMX19_02482	0.35	-0.9
2,602,823	-		MPMX19_02482	0.35	-0.6
2,602,823	-		MPMX19_02482	0.35	-0.1
2,602,823	-		MPMX19_02482	0.35	+0.3
2,602,823	-		MPMX19_02482	0.35	-0.8
2,602,823	-		MPMX19_02482	0.35	-0.2
2,602,823	-		MPMX19_02482	0.35	-0.1
2,602,823	-		MPMX19_02482	0.35	-0.6
2,603,026	+		MPMX19_02482	0.48	-1.5
2,603,026	+		MPMX19_02482	0.48	-1.4
2,603,026	+		MPMX19_02482	0.48	-0.6
2,603,027	-		MPMX19_02482	0.48	-0.3
2,603,027	-		MPMX19_02482	0.48	+0.1
2,603,515	+		MPMX19_02482	0.80	+1.3
2,603,515	+		MPMX19_02482	0.80	+0.6
2,603,515	+		MPMX19_02482	0.80	-0.3
2,603,516	-		MPMX19_02482	0.80	-0.1
2,603,516	-		MPMX19_02482	0.80	+0.7
2,603,516	-		MPMX19_02482	0.80	+1.0
2,603,516	-		MPMX19_02482	0.80	+0.0
2,603,516	-		MPMX19_02482	0.80	+0.8
2,603,516	-		MPMX19_02482	0.80	-1.7
2,603,859	+				+0.3
2,603,859	+				+0.1
2,603,860	-				+0.4
2,603,872	-				-0.1
2,603,872	-				-0.8
2,603,978	+				-1.4
2,603,978	+				-0.3
2,603,978	+				-0.1
2,603,978	+				-1.1
2,603,978	+				-0.6
2,603,978	+				-1.5
2,603,979	-				-0.0
2,603,979	-				+0.0
2,603,979	-				-2.1
2,603,979	-				-0.7
2,603,979	-				-0.4
2,603,979	-				-1.7
2,603,979	-				-1.4
2,604,083	+				+0.2
2,604,083	+				-1.1
2,604,083	+				-1.8
2,604,083	+				-0.0
2,604,084	-				-0.7
2,604,084	-				-0.8
2,604,084	-				-0.0
2,604,084	-				+0.6
2,604,084	-				+0.4
2,604,084	-				-2.4
2,604,306	+		MPMX19_02483	0.35	-1.1
2,604,306	+		MPMX19_02483	0.35	-2.3
2,604,306	+		MPMX19_02483	0.35	-1.2
2,604,306	+		MPMX19_02483	0.35	+2.7
2,604,306	+		MPMX19_02483	0.35	-0.7
2,604,306	+		MPMX19_02483	0.35	-0.9
2,604,307	-		MPMX19_02483	0.35	-0.3
2,604,317	+		MPMX19_02483	0.37	-1.3
2,604,317	+		MPMX19_02483	0.37	-0.4
2,604,317	+		MPMX19_02483	0.37	-0.5
2,604,317	+		MPMX19_02483	0.37	-0.9
2,604,317	+		MPMX19_02483	0.37	+0.5
2,604,317	+		MPMX19_02483	0.37	+0.6
2,604,317	+		MPMX19_02483	0.37	-0.4
2,604,317	+		MPMX19_02483	0.37	+0.7
2,604,317	+		MPMX19_02483	0.37	-0.0
2,604,317	+		MPMX19_02483	0.37	+1.1
2,604,317	+		MPMX19_02483	0.37	+0.0
2,604,317	+		MPMX19_02483	0.37	-1.8
2,604,317	+		MPMX19_02483	0.37	+0.7
2,604,318	-		MPMX19_02483	0.37	-1.2
2,604,318	-		MPMX19_02483	0.37	+0.2
2,604,318	-		MPMX19_02483	0.37	+0.7
2,604,318	-		MPMX19_02483	0.37	-1.8
2,604,318	-		MPMX19_02483	0.37	-1.9
2,604,318	-		MPMX19_02483	0.37	-0.3
2,604,318	-		MPMX19_02483	0.37	-0.5
2,604,318	-		MPMX19_02483	0.37	-0.6
2,604,318	-		MPMX19_02483	0.37	-1.2
2,604,318	-		MPMX19_02483	0.37	+0.9
2,604,318	-		MPMX19_02483	0.37	-0.2
2,604,318	-		MPMX19_02483	0.37	-1.6
2,604,318	-		MPMX19_02483	0.37	-0.7
2,604,318	-		MPMX19_02483	0.37	-0.8
2,604,407	+		MPMX19_02483	0.49	-1.0
2,604,407	+		MPMX19_02483	0.49	-0.1
2,604,407	+		MPMX19_02483	0.49	-0.1
2,604,407	+		MPMX19_02483	0.49	-0.8
2,604,407	+		MPMX19_02483	0.49	-0.3
2,604,407	+		MPMX19_02483	0.49	-0.2
2,604,407	+		MPMX19_02483	0.49	-0.1
2,604,407	+		MPMX19_02483	0.49	-0.5
2,604,407	+		MPMX19_02483	0.49	-0.5
2,604,407	+		MPMX19_02483	0.49	+0.4
2,604,407	+		MPMX19_02483	0.49	-0.8
2,604,407	+		MPMX19_02483	0.49	-0.0
2,604,407	+		MPMX19_02483	0.49	-0.4
2,604,407	+		MPMX19_02483	0.49	+1.3
2,604,407	+		MPMX19_02483	0.49	+0.1
2,604,407	+		MPMX19_02483	0.49	+0.1
2,604,407	+		MPMX19_02483	0.49	+0.9
2,604,407	+		MPMX19_02483	0.49	-0.8
2,604,407	+		MPMX19_02483	0.49	-0.3
2,604,407	+		MPMX19_02483	0.49	-0.6
2,604,408	-		MPMX19_02483	0.49	-3.2
2,604,408	-		MPMX19_02483	0.49	+0.2
2,604,408	-		MPMX19_02483	0.49	-1.2
2,604,408	-		MPMX19_02483	0.49	-0.3
2,604,408	-		MPMX19_02483	0.49	+0.3
2,604,408	-		MPMX19_02483	0.49	+0.2
2,604,408	-		MPMX19_02483	0.49	-0.0
2,604,408	-		MPMX19_02483	0.49	-1.6
2,604,408	-		MPMX19_02483	0.49	-0.1
2,604,408	-		MPMX19_02483	0.49	-0.5
2,604,408	-		MPMX19_02483	0.49	-1.8
2,604,408	-		MPMX19_02483	0.49	+0.9
2,604,408	-		MPMX19_02483	0.49	-0.3
2,604,408	-		MPMX19_02483	0.49	-1.3
2,604,408	-		MPMX19_02483	0.49	+1.2
2,604,408	-		MPMX19_02483	0.49	-0.3
2,604,408	-		MPMX19_02483	0.49	+0.2
2,604,416	+		MPMX19_02483	0.50	+0.2
2,604,416	+		MPMX19_02483	0.50	+0.2
2,604,416	+		MPMX19_02483	0.50	+0.6
2,604,416	+		MPMX19_02483	0.50	-0.2
2,604,416	+		MPMX19_02483	0.50	-0.4
2,604,416	+		MPMX19_02483	0.50	-0.3
2,604,416	+		MPMX19_02483	0.50	+0.2
2,604,416	+		MPMX19_02483	0.50	+0.7
2,604,416	+		MPMX19_02483	0.50	-0.4
2,604,416	+		MPMX19_02483	0.50	-0.8
2,604,416	+		MPMX19_02483	0.50	-0.8
2,604,416	+		MPMX19_02483	0.50	+1.5
2,604,416	+		MPMX19_02483	0.50	-2.1
2,604,416	+		MPMX19_02483	0.50	-1.8
2,604,417	-		MPMX19_02483	0.50	+0.7
2,604,417	-		MPMX19_02483	0.50	-1.3
2,604,417	-		MPMX19_02483	0.50	-0.5
2,604,417	-		MPMX19_02483	0.50	-0.1
2,604,417	-		MPMX19_02483	0.50	-0.5
2,604,417	-		MPMX19_02483	0.50	+0.2
2,604,417	-		MPMX19_02483	0.50	-0.2
2,604,417	-		MPMX19_02483	0.50	-0.7
2,604,417	-		MPMX19_02483	0.50	-0.4
2,604,417	-		MPMX19_02483	0.50	-0.2
2,604,417	-		MPMX19_02483	0.50	+0.4
2,604,417	-		MPMX19_02483	0.50	+0.6
2,604,417	-		MPMX19_02483	0.50	-0.3
2,604,417	-		MPMX19_02483	0.50	-3.3
2,604,417	-		MPMX19_02483	0.50	-1.4
2,604,417	-		MPMX19_02483	0.50	+1.0
2,604,417	-		MPMX19_02483	0.50	+0.3
2,604,417	-		MPMX19_02483	0.50	-1.0
2,604,417	-		MPMX19_02483	0.50	+0.4
2,604,521	+		MPMX19_02483	0.64	-0.8
2,604,521	+		MPMX19_02483	0.64	-0.1
2,604,521	+		MPMX19_02483	0.64	-0.3
2,604,521	+		MPMX19_02483	0.64	+0.3
2,604,521	+		MPMX19_02483	0.64	-0.3
2,604,521	+		MPMX19_02483	0.64	-1.2
2,604,521	+		MPMX19_02483	0.64	-0.5
2,604,521	+		MPMX19_02483	0.64	+0.1
2,604,521	+		MPMX19_02483	0.64	-0.1
2,604,521	+		MPMX19_02483	0.64	+0.2
2,604,521	+		MPMX19_02483	0.64	+1.7
2,604,522	-		MPMX19_02483	0.64	-0.3
2,604,522	-		MPMX19_02483	0.64	+0.5
2,604,522	-		MPMX19_02483	0.64	-0.8
2,604,522	-		MPMX19_02483	0.64	-0.8
2,604,522	-		MPMX19_02483	0.64	-0.7
2,604,522	-		MPMX19_02483	0.64	-0.7
2,604,522	-		MPMX19_02483	0.64	-0.7
2,604,522	-		MPMX19_02483	0.64	-0.6
2,604,522	-		MPMX19_02483	0.64	+0.4
2,604,522	-		MPMX19_02483	0.64	-0.8
2,604,575	+		MPMX19_02483	0.71	-1.2
2,604,575	+		MPMX19_02483	0.71	+1.0
2,604,575	+		MPMX19_02483	0.71	+0.6
2,604,575	+		MPMX19_02483	0.71	-1.2
2,604,575	+		MPMX19_02483	0.71	+0.2
2,604,575	+		MPMX19_02483	0.71	-1.0
2,604,575	+		MPMX19_02483	0.71	-1.6
2,604,575	+		MPMX19_02483	0.71	+1.2
2,604,575	+		MPMX19_02483	0.71	+0.7
2,604,575	+		MPMX19_02483	0.71	-0.5
2,604,576	-		MPMX19_02483	0.71	+0.2
2,604,576	-		MPMX19_02483	0.71	+0.5
2,604,576	-		MPMX19_02483	0.71	-0.7
2,604,576	-		MPMX19_02483	0.71	+0.3
2,604,576	-		MPMX19_02483	0.71	-1.1
2,604,576	-		MPMX19_02483	0.71	-1.1
2,604,576	-		MPMX19_02483	0.71	-0.8
2,604,576	-		MPMX19_02483	0.71	-1.1
2,604,576	-		MPMX19_02483	0.71	-1.3
2,604,576	-		MPMX19_02483	0.71	-0.3
2,604,576	-		MPMX19_02483	0.71	+0.0
2,604,576	-		MPMX19_02483	0.71	-0.8
2,604,576	-		MPMX19_02483	0.71	+0.9
2,604,581	+		MPMX19_02483	0.72	-1.3
2,604,581	+		MPMX19_02483	0.72	-0.1
2,604,581	+		MPMX19_02483	0.72	+1.4
2,604,582	-		MPMX19_02483	0.72	-0.1
2,604,731	+				-1.8
2,604,731	+				+1.2
2,604,731	+				-1.7
2,604,731	+				-0.8
2,604,731	+				-0.5
2,604,731	+				-0.9
2,604,731	+				-0.4
2,604,731	+				-1.6
2,604,731	+				-2.0
2,604,731	+				+1.7
2,604,731	+				-0.6
2,604,731	+				+0.8
2,604,731	+				-1.3
2,604,731	+				-0.4
2,604,731	+				-1.1
2,604,732	-				+0.8
2,604,732	-				+1.7
2,604,732	-				-1.1
2,604,732	-				-0.1
2,604,732	-				-1.6
2,604,732	-				+0.6
2,604,764	+				-0.1
2,604,765	-				-1.0
2,604,765	-				-1.3
2,604,788	+				-0.8
2,604,788	+				-1.4
2,604,788	+				+0.6
2,604,788	+				-2.4
2,604,788	+				-0.4
2,604,788	+				-0.6
2,604,788	+				-2.0
2,604,789	-				-1.4
2,604,789	-				-0.5
2,604,789	-				-1.0
2,604,789	-				-1.1