Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02022

Experiment: NL-CCM_agar

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM_agar
2,111,326	-				-1.7
2,111,382	+				-2.0
2,111,382	+				-1.0
2,111,382	+				-0.1
2,111,382	+				+0.7
2,111,383	-				-1.4
2,111,383	-				-0.1
2,111,775	+		MPMX19_02021	0.55	-0.7
2,111,775	+		MPMX19_02021	0.55	-0.7
2,111,775	+		MPMX19_02021	0.55	-0.1
2,111,775	+		MPMX19_02021	0.55	+2.1
2,111,775	+		MPMX19_02021	0.55	-0.0
2,111,775	+		MPMX19_02021	0.55	+0.5
2,111,775	+		MPMX19_02021	0.55	-0.9
2,111,775	+		MPMX19_02021	0.55	-0.7
2,111,775	+		MPMX19_02021	0.55	+0.6
2,111,775	+		MPMX19_02021	0.55	-0.3
2,111,775	+		MPMX19_02021	0.55	-2.1
2,111,776	-		MPMX19_02021	0.55	-1.9
2,111,776	-		MPMX19_02021	0.55	-0.8
2,111,776	-		MPMX19_02021	0.55	-0.5
2,111,776	-		MPMX19_02021	0.55	-1.1
2,111,776	-		MPMX19_02021	0.55	-1.7
2,111,776	-		MPMX19_02021	0.55	-2.1
2,111,776	-		MPMX19_02021	0.55	-1.2
2,111,776	-		MPMX19_02021	0.55	+0.8
2,111,776	-		MPMX19_02021	0.55	-0.8
2,111,776	-		MPMX19_02021	0.55	-1.4
2,112,033	+				-0.4
2,112,033	+				-0.6
2,112,033	+				-1.0
2,112,034	-				+0.7
2,112,211	+		MPMX19_02022	0.20	+1.0
2,112,211	+		MPMX19_02022	0.20	+0.3
2,112,211	+		MPMX19_02022	0.20	-0.4
2,112,211	+		MPMX19_02022	0.20	+0.8
2,112,211	+		MPMX19_02022	0.20	+0.2
2,112,212	-		MPMX19_02022	0.20	+0.8
2,112,212	-		MPMX19_02022	0.20	+1.0
2,112,445	+		MPMX19_02022	0.59	+0.4
2,112,445	+		MPMX19_02022	0.59	+0.0
2,112,445	+		MPMX19_02022	0.59	-1.2
2,112,445	+		MPMX19_02022	0.59	-1.2
2,112,445	+		MPMX19_02022	0.59	+0.0
2,112,446	-		MPMX19_02022	0.60	+0.6
2,112,446	-		MPMX19_02022	0.60	+0.6
2,112,446	-		MPMX19_02022	0.60	+1.1
2,112,446	-		MPMX19_02022	0.60	-1.2
2,112,446	-		MPMX19_02022	0.60	+0.0
2,112,446	-		MPMX19_02022	0.60	-0.9
2,112,446	-		MPMX19_02022	0.60	-2.1
2,112,446	-		MPMX19_02022	0.60	+0.0
2,112,446	-		MPMX19_02022	0.60	-1.7
2,112,532	+		MPMX19_02022	0.74	+0.9
2,112,532	+		MPMX19_02022	0.74	+0.1
2,112,600	+		MPMX19_02022	0.85	-0.1
2,112,600	+		MPMX19_02022	0.85	+1.3
2,112,601	-		MPMX19_02022	0.86	+0.1
2,112,810	+				-0.7
2,112,810	+				-0.2
2,112,810	+				-0.2
2,112,810	+				+0.4
2,112,810	+				-1.0
2,112,810	+				-1.0
2,112,810	+				-1.0
2,112,810	+				-0.1
2,112,810	+				+0.8
2,112,810	+				-0.8
2,112,810	+				-0.3
2,112,810	+				-0.6
2,112,810	+				-0.7
2,112,811	-				+1.3
2,112,811	-				-0.1
2,112,811	-				-0.5
2,112,811	-				-0.4
2,112,811	-				-0.2
2,112,811	-				-2.0
2,112,811	-				-0.4
2,112,811	-				-1.5
2,112,811	-				-0.4
2,112,811	-				-0.5
2,112,811	-				-0.8
2,112,811	-				-1.1
2,112,811	-				-0.5
2,112,832	+				+0.0
2,112,833	-				+0.8
2,112,883	+				+0.8
2,112,929	+				-0.0
2,112,929	+				+0.7
2,112,929	+				+0.7
2,112,929	+				+0.3
2,112,929	+				+0.0
2,112,929	+				+0.4
2,112,929	+				+0.1
2,112,930	-				-0.4
2,112,930	-				-2.6
2,113,043	+				-0.1
2,113,043	+				-0.1
2,113,043	+				+0.1
2,113,043	+				+0.1
2,113,043	+				+0.4
2,113,043	+				-0.4
2,113,043	+				+0.2
2,113,044	-				+0.1
2,113,044	-				-1.4
2,113,044	-				-0.3
2,113,044	-				+0.1
2,113,044	-				-1.4
2,113,044	-				+0.9
2,113,044	-				-1.5
2,113,044	-				-1.6
2,113,079	+				+0.4
2,113,079	+				-1.1
2,113,079	+				+0.7
2,113,079	+				+0.2
2,113,079	+				+0.8
2,113,080	-				-0.6
2,113,080	-				-1.0
2,113,080	-				-0.6
2,113,080	-				+0.0
2,113,080	-				+0.3
2,113,080	-				-1.2
2,113,080	-				-0.2
2,113,080	-				-0.7
2,113,080	-				+0.5
2,113,080	-				-0.5
2,113,080	-				-0.4
2,113,175	+		MPMX19_02023	0.12	+0.3
2,113,176	-		MPMX19_02023	0.12	+0.2
2,113,400	+		MPMX19_02023	0.24	+0.5
2,113,400	+		MPMX19_02023	0.24	+0.6
2,113,400	+		MPMX19_02023	0.24	-1.3
2,113,400	+		MPMX19_02023	0.24	-2.2
2,113,400	+		MPMX19_02023	0.24	+0.6
2,113,400	+		MPMX19_02023	0.24	-0.6
2,113,400	+		MPMX19_02023	0.24	+0.3
2,113,400	+		MPMX19_02023	0.24	-1.4
2,113,400	+		MPMX19_02023	0.24	-0.1
2,113,400	+		MPMX19_02023	0.24	-1.0
2,113,400	+		MPMX19_02023	0.24	-0.7
2,113,400	+		MPMX19_02023	0.24	+0.0
2,113,401	-		MPMX19_02023	0.24	-1.0
2,113,401	-		MPMX19_02023	0.24	-0.3
2,113,401	-		MPMX19_02023	0.24	-1.9
2,113,401	-		MPMX19_02023	0.24	-2.2
2,113,401	-		MPMX19_02023	0.24	+0.0
2,113,401	-		MPMX19_02023	0.24	-0.5
2,113,401	-		MPMX19_02023	0.24	-0.7
2,113,401	-		MPMX19_02023	0.24	+0.1
2,113,401	-		MPMX19_02023	0.24	-0.7
2,113,509	+		MPMX19_02023	0.29	-1.1
2,113,509	+		MPMX19_02023	0.29	+0.7
2,113,509	+		MPMX19_02023	0.29	-1.1
2,113,509	+		MPMX19_02023	0.29	-0.1
2,113,509	+		MPMX19_02023	0.29	+1.2
2,113,509	+		MPMX19_02023	0.29	-0.4
2,113,509	+		MPMX19_02023	0.29	-1.3
2,113,509	+		MPMX19_02023	0.29	-0.1
2,113,509	+		MPMX19_02023	0.29	+1.1
2,113,509	+		MPMX19_02023	0.29	+1.6
2,113,509	+		MPMX19_02023	0.29	+0.4
2,113,509	+		MPMX19_02023	0.29	-0.5
2,113,509	+		MPMX19_02023	0.29	+0.2
2,113,509	+		MPMX19_02023	0.29	-0.1
2,113,509	+		MPMX19_02023	0.29	+0.2
2,113,509	+		MPMX19_02023	0.29	+0.1
2,113,509	+		MPMX19_02023	0.29	-1.1
2,113,510	-		MPMX19_02023	0.29	-0.4
2,113,510	-		MPMX19_02023	0.29	-1.2
2,113,510	-		MPMX19_02023	0.29	-1.6
2,113,510	-		MPMX19_02023	0.29	-0.5
2,113,510	-		MPMX19_02023	0.29	+0.1
2,113,510	-		MPMX19_02023	0.29	-0.3
2,113,510	-		MPMX19_02023	0.29	-2.9
2,113,510	-		MPMX19_02023	0.29	-1.0
2,113,510	-		MPMX19_02023	0.29	-1.7
2,113,510	-		MPMX19_02023	0.29	-0.9
2,113,510	-		MPMX19_02023	0.29	-1.6
2,113,510	-		MPMX19_02023	0.29	-0.0