Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01854

Experiment: NL-CCM_agar

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM_agar
1,931,452	-				-1.5
1,931,452	-				-1.9
1,931,567	+		MPMX19_01853	0.18	-1.0
1,931,567	+		MPMX19_01853	0.18	-1.6
1,931,567	+		MPMX19_01853	0.18	-1.5
1,931,568	-		MPMX19_01853	0.18	-1.0
1,931,568	-		MPMX19_01853	0.18	+0.2
1,931,568	-		MPMX19_01853	0.18	+1.5
1,931,568	-		MPMX19_01853	0.18	+0.1
1,931,568	-		MPMX19_01853	0.18	-0.5
1,931,568	-		MPMX19_01853	0.18	-0.0
1,931,568	-		MPMX19_01853	0.18	-0.6
1,931,570	+		MPMX19_01853	0.18	-1.3
1,931,570	+		MPMX19_01853	0.18	+0.7
1,931,570	+		MPMX19_01853	0.18	+1.0
1,931,571	-		MPMX19_01853	0.18	+0.5
1,931,571	-		MPMX19_01853	0.18	-0.7
1,931,571	-		MPMX19_01853	0.18	-1.8
1,931,571	-		MPMX19_01853	0.18	-0.5
1,931,591	+		MPMX19_01853	0.20	-0.0
1,931,591	+		MPMX19_01853	0.20	-0.0
1,931,591	+		MPMX19_01853	0.20	-0.2
1,931,591	+		MPMX19_01853	0.20	-0.6
1,931,591	+		MPMX19_01853	0.20	-0.2
1,931,591	+		MPMX19_01853	0.20	-1.6
1,931,591	+		MPMX19_01853	0.20	-1.6
1,931,591	+		MPMX19_01853	0.20	-0.0
1,931,592	-		MPMX19_01853	0.20	-0.5
1,931,592	-		MPMX19_01853	0.20	+0.7
1,931,592	-		MPMX19_01853	0.20	-0.7
1,931,592	-		MPMX19_01853	0.20	-1.3
1,931,592	-		MPMX19_01853	0.20	-0.9
1,931,592	-		MPMX19_01853	0.20	-0.1
1,931,592	-		MPMX19_01853	0.20	+0.1
1,931,594	+		MPMX19_01853	0.20	+0.5
1,931,594	+		MPMX19_01853	0.20	-1.1
1,931,594	+		MPMX19_01853	0.20	+0.1
1,931,594	+		MPMX19_01853	0.20	+0.2
1,931,594	+		MPMX19_01853	0.20	-0.4
1,931,594	+		MPMX19_01853	0.20	-0.7
1,931,595	-		MPMX19_01853	0.20	-1.5
1,931,595	-		MPMX19_01853	0.20	-1.5
1,931,595	-		MPMX19_01853	0.20	-1.3
1,931,595	-		MPMX19_01853	0.20	+0.4
1,931,595	-		MPMX19_01853	0.20	-0.9
1,931,618	+		MPMX19_01853	0.22	-2.3
1,931,618	+		MPMX19_01853	0.22	-0.2
1,931,618	+		MPMX19_01853	0.22	+1.3
1,931,618	+		MPMX19_01853	0.22	-0.5
1,931,618	+		MPMX19_01853	0.22	+0.2
1,931,618	+		MPMX19_01853	0.22	+0.7
1,931,618	+		MPMX19_01853	0.22	-1.3
1,931,618	+		MPMX19_01853	0.22	-1.5
1,931,619	-		MPMX19_01853	0.23	-1.9
1,931,619	-		MPMX19_01853	0.23	-1.0
1,931,619	-		MPMX19_01853	0.23	-0.1
1,931,619	-		MPMX19_01853	0.23	-0.8
1,931,619	-		MPMX19_01853	0.23	+1.2
1,931,682	-		MPMX19_01853	0.29	+0.4
1,931,708	+		MPMX19_01853	0.31	-2.5
1,931,708	+		MPMX19_01853	0.31	-1.0
1,931,708	+		MPMX19_01853	0.31	-0.6
1,931,708	+		MPMX19_01853	0.31	-1.6
1,931,708	+		MPMX19_01853	0.31	+1.5
1,931,708	+		MPMX19_01853	0.31	-0.9
1,931,708	+		MPMX19_01853	0.31	-0.5
1,931,708	+		MPMX19_01853	0.31	-0.8
1,931,708	+		MPMX19_01853	0.31	-0.0
1,931,708	+		MPMX19_01853	0.31	-0.3
1,931,708	+		MPMX19_01853	0.31	+0.1
1,931,708	+		MPMX19_01853	0.31	+2.0
1,931,708	+		MPMX19_01853	0.31	+0.3
1,931,708	+		MPMX19_01853	0.31	-0.2
1,931,708	+		MPMX19_01853	0.31	+0.6
1,931,708	+		MPMX19_01853	0.31	-1.2
1,931,708	+		MPMX19_01853	0.31	+0.1
1,931,708	+		MPMX19_01853	0.31	-0.6
1,931,708	+		MPMX19_01853	0.31	-0.2
1,931,709	-		MPMX19_01853	0.31	-1.5
1,931,709	-		MPMX19_01853	0.31	-1.3
1,931,709	-		MPMX19_01853	0.31	+0.7
1,931,709	-		MPMX19_01853	0.31	-0.5
1,931,709	-		MPMX19_01853	0.31	+1.1
1,931,709	-		MPMX19_01853	0.31	+0.3
1,931,709	-		MPMX19_01853	0.31	-0.1
1,931,709	-		MPMX19_01853	0.31	-0.5
1,931,709	-		MPMX19_01853	0.31	-0.1
1,931,709	-		MPMX19_01853	0.31	+0.0
1,931,709	-		MPMX19_01853	0.31	+0.4
1,931,709	-		MPMX19_01853	0.31	-0.6
1,931,709	-		MPMX19_01853	0.31	-1.0
1,931,709	-		MPMX19_01853	0.31	-1.9
1,931,759	+		MPMX19_01853	0.36	-1.5
1,931,759	+		MPMX19_01853	0.36	-0.5
1,931,759	+		MPMX19_01853	0.36	+0.1
1,931,760	-		MPMX19_01853	0.36	-0.2
1,931,760	-		MPMX19_01853	0.36	-0.0
1,931,774	+		MPMX19_01853	0.37	-0.2
1,931,774	+		MPMX19_01853	0.37	-0.3
1,931,774	+		MPMX19_01853	0.37	+0.1
1,931,774	+		MPMX19_01853	0.37	-0.3
1,931,774	+		MPMX19_01853	0.37	-0.7
1,931,774	+		MPMX19_01853	0.37	-0.1
1,931,774	+		MPMX19_01853	0.37	+0.9
1,931,774	+		MPMX19_01853	0.37	-0.2
1,931,774	+		MPMX19_01853	0.37	+0.4
1,931,775	-		MPMX19_01853	0.37	+0.1
1,931,775	-		MPMX19_01853	0.37	-1.6
1,931,775	-		MPMX19_01853	0.37	-0.0
1,931,775	-		MPMX19_01853	0.37	+0.3
1,931,775	-		MPMX19_01853	0.37	-0.3
1,931,775	-		MPMX19_01853	0.37	+0.3
1,931,909	+		MPMX19_01853	0.50	-1.6
1,931,909	+		MPMX19_01853	0.50	-1.1
1,931,909	+		MPMX19_01853	0.50	-0.6
1,931,909	+		MPMX19_01853	0.50	+1.5
1,931,909	+		MPMX19_01853	0.50	-0.8
1,931,909	+		MPMX19_01853	0.50	-0.9
1,931,910	-		MPMX19_01853	0.50	-1.1
1,931,910	-		MPMX19_01853	0.50	-1.8
1,931,910	-		MPMX19_01853	0.50	+0.3
1,931,910	-		MPMX19_01853	0.50	-0.4
1,931,927	+		MPMX19_01853	0.52	-0.6
1,931,927	+		MPMX19_01853	0.52	-0.5
1,931,927	+		MPMX19_01853	0.52	-0.6
1,931,927	+		MPMX19_01853	0.52	+0.8
1,931,927	+		MPMX19_01853	0.52	-1.0
1,931,927	+		MPMX19_01853	0.52	+0.3
1,931,927	+		MPMX19_01853	0.52	+0.2
1,931,928	-		MPMX19_01853	0.52	+0.4
1,931,928	-		MPMX19_01853	0.52	+0.7
1,931,928	-		MPMX19_01853	0.52	-0.5
1,931,928	-		MPMX19_01853	0.52	-0.0
1,931,928	-		MPMX19_01853	0.52	-0.8
1,931,928	-		MPMX19_01853	0.52	-1.9
1,931,928	-		MPMX19_01853	0.52	+0.7
1,931,934	+		MPMX19_01853	0.52	+0.9
1,931,935	-		MPMX19_01853	0.52	-0.7
1,931,935	-		MPMX19_01853	0.52	-1.0
1,931,935	-		MPMX19_01853	0.52	-0.3
1,931,935	-		MPMX19_01853	0.52	-1.3
1,931,963	+		MPMX19_01853	0.55	+0.5
1,931,963	+		MPMX19_01853	0.55	-0.6
1,931,963	+		MPMX19_01853	0.55	-1.5
1,931,963	+		MPMX19_01853	0.55	+1.5
1,931,963	+		MPMX19_01853	0.55	+0.2
1,931,963	+		MPMX19_01853	0.55	-1.3
1,931,963	+		MPMX19_01853	0.55	-0.8
1,931,963	+		MPMX19_01853	0.55	+1.2
1,931,963	+		MPMX19_01853	0.55	+0.4
1,931,963	+		MPMX19_01853	0.55	-1.2
1,931,963	+		MPMX19_01853	0.55	-1.6
1,931,963	+		MPMX19_01853	0.55	-1.0
1,931,963	+		MPMX19_01853	0.55	-0.0
1,931,964	-		MPMX19_01853	0.55	-2.3
1,931,964	-		MPMX19_01853	0.55	-0.3
1,931,964	-		MPMX19_01853	0.55	-0.3
1,931,964	-		MPMX19_01853	0.55	+0.4
1,931,964	-		MPMX19_01853	0.55	-1.5
1,931,964	-		MPMX19_01853	0.55	-0.8
1,931,964	-		MPMX19_01853	0.55	+0.2
1,931,964	-		MPMX19_01853	0.55	-0.9
1,931,964	-		MPMX19_01853	0.55	-0.3
1,931,964	-		MPMX19_01853	0.55	-0.5
1,931,964	-		MPMX19_01853	0.55	-0.6
1,931,964	-		MPMX19_01853	0.55	-0.3
1,931,964	-		MPMX19_01853	0.55	-0.0
1,931,964	-		MPMX19_01853	0.55	-1.0
1,931,964	-		MPMX19_01853	0.55	-0.9
1,931,964	-		MPMX19_01853	0.55	-0.6
1,931,964	-		MPMX19_01853	0.55	-0.6
1,931,964	-		MPMX19_01853	0.55	+0.5
1,931,964	-		MPMX19_01853	0.55	-0.7
1,931,964	-		MPMX19_01853	0.55	-0.9
1,931,964	-		MPMX19_01853	0.55	-0.9
1,931,964	-		MPMX19_01853	0.55	-0.5
1,931,964	-		MPMX19_01853	0.55	-2.4
1,931,964	-		MPMX19_01853	0.55	+1.0
1,932,152	+		MPMX19_01853	0.73	-0.9
1,932,152	+		MPMX19_01853	0.73	-0.8
1,932,153	-		MPMX19_01853	0.73	+0.5
1,932,153	-		MPMX19_01853	0.73	-0.9
1,932,167	+		MPMX19_01853	0.74	-2.3
1,932,167	+		MPMX19_01853	0.74	-0.8
1,932,167	+		MPMX19_01853	0.74	-0.1
1,932,168	-		MPMX19_01853	0.75	+0.4
1,932,168	-		MPMX19_01853	0.75	-0.0
1,932,197	+		MPMX19_01853	0.77	-1.2
1,932,197	+		MPMX19_01853	0.77	-0.6
1,932,197	+		MPMX19_01853	0.77	+0.9
1,932,197	+		MPMX19_01853	0.77	-0.3
1,932,197	+		MPMX19_01853	0.77	+1.1
1,932,197	+		MPMX19_01853	0.77	-0.5
1,932,197	+		MPMX19_01853	0.77	+1.3
1,932,197	+		MPMX19_01853	0.77	-1.4
1,932,197	+		MPMX19_01853	0.77	+1.0
1,932,197	+		MPMX19_01853	0.77	-0.8
1,932,197	+		MPMX19_01853	0.77	-0.1
1,932,197	+		MPMX19_01853	0.77	-0.0
1,932,197	+		MPMX19_01853	0.77	+1.1
1,932,197	+		MPMX19_01853	0.77	-0.5
1,932,197	+		MPMX19_01853	0.77	+0.3
1,932,197	+		MPMX19_01853	0.77	+0.5
1,932,197	+		MPMX19_01853	0.77	+0.2
1,932,198	-		MPMX19_01853	0.77	-0.5
1,932,198	-		MPMX19_01853	0.77	-1.8
1,932,198	-		MPMX19_01853	0.77	-0.9
1,932,198	-		MPMX19_01853	0.77	+1.5
1,932,198	-		MPMX19_01853	0.77	+1.0
1,932,198	-		MPMX19_01853	0.77	-0.6
1,932,198	-		MPMX19_01853	0.77	-1.0
1,932,198	-		MPMX19_01853	0.77	+0.8
1,932,198	-		MPMX19_01853	0.77	-1.5
1,932,198	-		MPMX19_01853	0.77	+0.9
1,932,198	-		MPMX19_01853	0.77	-0.4
1,932,198	-		MPMX19_01853	0.77	-1.0
1,932,203	+		MPMX19_01853	0.78	+0.9
1,932,203	+		MPMX19_01853	0.78	-0.6
1,932,203	+		MPMX19_01853	0.78	-1.0
1,932,203	+		MPMX19_01853	0.78	-1.3
1,932,203	+		MPMX19_01853	0.78	-1.8
1,932,203	+		MPMX19_01853	0.78	-1.0
1,932,203	+		MPMX19_01853	0.78	-0.9
1,932,203	+		MPMX19_01853	0.78	+1.0
1,932,203	+		MPMX19_01853	0.78	-0.0
1,932,203	+		MPMX19_01853	0.78	-1.8
1,932,203	+		MPMX19_01853	0.78	+1.1
1,932,203	+		MPMX19_01853	0.78	+0.3
1,932,203	+		MPMX19_01853	0.78	-0.0
1,932,203	+		MPMX19_01853	0.78	-0.2
1,932,203	+		MPMX19_01853	0.78	-2.2
1,932,204	-		MPMX19_01853	0.78	-1.0
1,932,204	-		MPMX19_01853	0.78	-0.7
1,932,204	-		MPMX19_01853	0.78	+0.5
1,932,204	-		MPMX19_01853	0.78	-1.3
1,932,204	-		MPMX19_01853	0.78	+0.6
1,932,204	-		MPMX19_01853	0.78	-0.0
1,932,204	-		MPMX19_01853	0.78	-0.7
1,932,204	-		MPMX19_01853	0.78	+1.0
1,932,204	-		MPMX19_01853	0.78	+0.7
1,932,204	-		MPMX19_01853	0.78	-1.0
1,932,204	-		MPMX19_01853	0.78	-1.3
1,932,204	-		MPMX19_01853	0.78	+0.4
1,932,204	-		MPMX19_01853	0.78	-2.3
1,932,204	-		MPMX19_01853	0.78	+0.5
1,932,204	-		MPMX19_01853	0.78	-0.6
1,932,204	-		MPMX19_01853	0.78	-1.7
1,932,329	+		MPMX19_01853	0.90	+0.8
1,932,338	+				-0.0
1,932,338	+				-1.3
1,932,350	+				-1.4
1,932,350	+				-0.7
1,932,351	-				-0.8
1,932,351	-				-0.8
1,932,404	+				-0.5
1,932,404	+				+0.1
1,932,404	+				-2.3
1,932,404	+				+0.0
1,932,404	+				-0.1
1,932,404	+				+1.5
1,932,404	+				-0.3
1,932,405	-				+0.3
1,932,405	-				-0.2
1,932,405	-				+0.3
1,932,841	+		MPMX19_01854	0.62	-0.7
1,932,841	+		MPMX19_01854	0.62	-1.3
1,932,841	+		MPMX19_01854	0.62	-0.0
1,932,841	+		MPMX19_01854	0.62	-1.3
1,932,841	+		MPMX19_01854	0.62	-0.5
1,932,841	+		MPMX19_01854	0.62	+0.1
1,932,842	-		MPMX19_01854	0.62	+0.1
1,932,842	-		MPMX19_01854	0.62	-0.5
1,932,842	-		MPMX19_01854	0.62	+0.4
1,932,842	-		MPMX19_01854	0.62	+1.2
1,932,842	-		MPMX19_01854	0.62	-0.6
1,932,842	-		MPMX19_01854	0.62	+1.1
1,932,842	-		MPMX19_01854	0.62	-0.4
1,932,844	+		MPMX19_01854	0.62	-0.5
1,932,844	+		MPMX19_01854	0.62	+0.0
1,932,844	+		MPMX19_01854	0.62	-1.6
1,932,844	+		MPMX19_01854	0.62	+1.0
1,932,845	-		MPMX19_01854	0.63	-0.6
1,932,845	-		MPMX19_01854	0.63	+0.9
1,932,845	-		MPMX19_01854	0.63	+1.1
1,932,845	-		MPMX19_01854	0.63	+0.5
1,932,949	+		MPMX19_01854	0.79	+0.3
1,932,949	+		MPMX19_01854	0.79	+0.7
1,932,949	+		MPMX19_01854	0.79	+0.7
1,932,949	+		MPMX19_01854	0.79	-1.8
1,932,949	+		MPMX19_01854	0.79	-1.6
1,932,949	+		MPMX19_01854	0.79	-1.2
1,932,949	+		MPMX19_01854	0.79	-1.5
1,932,949	+		MPMX19_01854	0.79	-1.6
1,932,949	+		MPMX19_01854	0.79	+0.1
1,932,949	+		MPMX19_01854	0.79	-1.5
1,932,949	+		MPMX19_01854	0.79	-1.8
1,932,949	+		MPMX19_01854	0.79	-1.3
1,932,949	+		MPMX19_01854	0.79	-1.6
1,932,949	+		MPMX19_01854	0.79	-1.0
1,932,949	+		MPMX19_01854	0.79	-0.9
1,932,949	+		MPMX19_01854	0.79	-1.7
1,932,949	+		MPMX19_01854	0.79	-0.0
1,932,949	+		MPMX19_01854	0.79	-0.0
1,932,949	+		MPMX19_01854	0.79	-1.3
1,932,949	+		MPMX19_01854	0.79	+0.1
1,932,949	+		MPMX19_01854	0.79	+0.4
1,932,949	+		MPMX19_01854	0.79	-0.1
1,932,949	+		MPMX19_01854	0.79	-0.8
1,932,949	+		MPMX19_01854	0.79	+0.1
1,932,949	+		MPMX19_01854	0.79	+0.4
1,932,949	+		MPMX19_01854	0.79	-0.3
1,932,949	+		MPMX19_01854	0.79	-0.3
1,932,949	+		MPMX19_01854	0.79	-0.6
1,932,950	-		MPMX19_01854	0.79	-0.3
1,932,950	-		MPMX19_01854	0.79	-0.5
1,932,950	-		MPMX19_01854	0.79	-1.5
1,932,950	-		MPMX19_01854	0.79	+0.4
1,932,950	-		MPMX19_01854	0.79	+0.7
1,932,950	-		MPMX19_01854	0.79	-0.9
1,932,950	-		MPMX19_01854	0.79	+0.7
1,932,950	-		MPMX19_01854	0.79	+1.0
1,932,950	-		MPMX19_01854	0.79	-1.6
1,932,950	-		MPMX19_01854	0.79	-1.5
1,932,950	-		MPMX19_01854	0.79	+1.0
1,932,950	-		MPMX19_01854	0.79	-1.8
1,932,950	-		MPMX19_01854	0.79	+2.0
1,932,950	-		MPMX19_01854	0.79	-0.7
1,932,950	-		MPMX19_01854	0.79	-2.7
1,932,950	-		MPMX19_01854	0.79	-0.7
1,932,950	-		MPMX19_01854	0.79	-0.8
1,932,950	-		MPMX19_01854	0.79	-1.9
1,932,950	-		MPMX19_01854	0.79	-0.6
1,932,950	-		MPMX19_01854	0.79	-1.3
1,932,950	-		MPMX19_01854	0.79	+0.3
1,932,950	-		MPMX19_01854	0.79	-0.8
1,932,950	-		MPMX19_01854	0.79	-0.9
1,932,950	-		MPMX19_01854	0.79	-1.3
1,932,950	-		MPMX19_01854	0.79	-2.0
1,932,950	-		MPMX19_01854	0.79	+0.2
1,932,950	-		MPMX19_01854	0.79	+0.2
1,932,950	-		MPMX19_01854	0.79	+0.0
1,932,950	-		MPMX19_01854	0.79	-1.9
1,932,950	-		MPMX19_01854	0.79	-0.5
1,932,950	-		MPMX19_01854	0.79	-1.2
1,932,950	-		MPMX19_01854	0.79	-0.6
1,932,950	-		MPMX19_01854	0.79	+0.9
1,932,950	-		MPMX19_01854	0.79	-1.3
1,932,950	-		MPMX19_01854	0.79	-1.9
1,933,138	+				-1.6
1,933,139	-				+2.4
1,933,209	+				-0.3
1,933,209	+				-1.3
1,933,209	+				+0.5
1,933,209	+				+0.5
1,933,209	+				+0.1
1,933,209	+				+0.4
1,933,209	+				-0.9
1,933,209	+				+0.1
1,933,209	-				-1.1
1,933,210	-				-0.0
1,933,210	-				-0.9
1,933,210	-				-0.2
1,933,210	-				-0.9
1,933,218	+				-0.6
1,933,218	+				-2.4
1,933,218	+				+0.1
1,933,218	+				-0.1
1,933,218	+				-2.4
1,933,219	-				+0.3
1,933,219	-				+0.3
1,933,219	-				-0.0
1,933,294	+				-2.0
1,933,294	+				+0.8
1,933,294	+				-1.6
1,933,294	+				+0.1
1,933,294	+				-0.5
1,933,295	-				-0.5
1,933,295	-				-0.3
1,933,295	-				-0.2
1,933,295	-				-0.9
1,933,295	-				-0.2
1,933,295	-				+0.5
1,933,984	+				+0.1
1,933,984	+				-0.5
1,933,984	+				-0.3
1,933,984	+				+0.6
1,933,984	+				-1.2
1,933,984	+				-0.2
1,933,984	+				+1.2
1,933,984	+				-0.7
1,933,984	+				+1.5
1,933,984	+				+0.2
1,933,984	+				-0.5
1,933,985	-				-1.5
1,933,985	-				+0.5
1,933,985	-				-0.4
1,933,985	-				-1.8
1,933,985	-				-0.0
1,933,985	-				-0.8
1,933,985	-				+1.3
1,933,985	-				-1.0
1,933,985	-				+0.2