Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01551

Experiment: NL-CCM_agar

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM_agar
1,625,040	+		MPMX19_01549	0.77	-0.7
1,625,368	-				+0.3
1,625,473	-		MPMX19_01550	0.33	-0.5
1,625,495	-		MPMX19_01550	0.59	-0.1
1,625,495	-		MPMX19_01550	0.59	-0.2
1,625,510	-		MPMX19_01550	0.76	-1.3
1,625,596	-				+0.8
1,625,596	-				+0.9
1,625,596	-				-1.7
1,625,596	-				+0.1
1,625,596	-				-0.4
1,625,596	-				-1.2
1,625,596	-				+0.9
1,625,596	-				-0.6
1,625,596	-				-1.6
1,625,596	-				-0.9
1,625,596	-				-0.5
1,625,596	-				-0.9
1,625,596	-				-1.9
1,625,598	-				-1.4
1,625,598	-				-2.1
1,625,598	-				-0.5
1,625,598	-				-1.3
1,625,598	-				+0.1
1,625,718	+				+0.1
1,625,719	-				-1.1
1,625,719	-				-1.5
1,625,755	+				-0.7
1,625,755	+				+0.2
1,625,755	+				-0.7
1,625,755	+				+1.0
1,625,755	+				-0.3
1,625,755	+				+0.5
1,625,755	+				-2.3
1,625,755	+				+0.2
1,625,755	+				-0.4
1,625,755	+				+0.1
1,625,755	+				-1.1
1,625,755	+				-0.5
1,625,755	+				+0.8
1,625,756	-				-0.7
1,625,756	-				-1.0
1,625,756	-				+0.8
1,625,756	-				-1.3
1,625,756	-				-1.8
1,625,756	-				-0.9
1,625,756	-				-0.8
1,625,756	-				-0.3
1,625,756	-				+0.2
1,625,756	-				+0.2
1,625,756	-				+0.0
1,625,756	-				-1.4
1,625,756	-				-2.3
1,625,797	+				+0.2
1,625,797	+				+0.8
1,625,797	+				-0.1
1,625,797	+				+0.5
1,625,798	-				-2.1
1,625,798	-				-1.5
1,625,798	-				-0.3
1,625,798	-				+0.4
1,625,959	+		MPMX19_01551	0.19	-1.7
1,625,959	+		MPMX19_01551	0.19	-1.2
1,625,959	+		MPMX19_01551	0.19	-1.3
1,625,959	+		MPMX19_01551	0.19	-0.5
1,625,959	+		MPMX19_01551	0.19	-0.3
1,625,959	+		MPMX19_01551	0.19	+0.5
1,625,959	+		MPMX19_01551	0.19	-0.9
1,625,960	-		MPMX19_01551	0.19	-0.1
1,625,960	-		MPMX19_01551	0.19	-0.8
1,625,960	-		MPMX19_01551	0.19	-0.8
1,625,960	-		MPMX19_01551	0.19	-0.3
1,625,960	-		MPMX19_01551	0.19	-0.8
1,625,960	-		MPMX19_01551	0.19	-1.3
1,625,960	-		MPMX19_01551	0.19	+0.3
1,625,960	-		MPMX19_01551	0.19	-0.8
1,625,960	-		MPMX19_01551	0.19	+0.2
1,625,960	-		MPMX19_01551	0.19	+0.1
1,625,960	-		MPMX19_01551	0.19	-2.7
1,625,960	-		MPMX19_01551	0.19	-2.3
1,625,960	-		MPMX19_01551	0.19	-1.5
1,625,960	-		MPMX19_01551	0.19	-0.8
1,626,235	+		MPMX19_01551	0.37	-0.2
1,626,235	+		MPMX19_01551	0.37	+0.5
1,626,235	+		MPMX19_01551	0.37	-0.5
1,626,235	+		MPMX19_01551	0.37	-0.1
1,626,235	+		MPMX19_01551	0.37	+1.2
1,626,235	+		MPMX19_01551	0.37	-1.3
1,626,236	-		MPMX19_01551	0.37	+0.3
1,626,343	+		MPMX19_01551	0.44	-0.8
1,626,343	+		MPMX19_01551	0.44	-1.9
1,626,343	+		MPMX19_01551	0.44	-0.8
1,626,343	+		MPMX19_01551	0.44	-1.7
1,626,343	+		MPMX19_01551	0.44	-0.2
1,626,344	-		MPMX19_01551	0.44	-1.8
1,626,344	-		MPMX19_01551	0.44	+0.5
1,626,344	-		MPMX19_01551	0.44	-0.2
1,626,344	-		MPMX19_01551	0.44	-1.5
1,626,444	+		MPMX19_01551	0.50	-0.7
1,626,444	+		MPMX19_01551	0.50	+1.2
1,626,444	+		MPMX19_01551	0.50	+0.2
1,626,445	-		MPMX19_01551	0.50	-1.9
1,626,445	-		MPMX19_01551	0.50	+0.7
1,626,445	-		MPMX19_01551	0.50	-1.9
1,626,559	+		MPMX19_01551	0.57	-1.7
1,626,559	+		MPMX19_01551	0.57	-1.8
1,626,559	+		MPMX19_01551	0.57	-1.8
1,626,559	+		MPMX19_01551	0.57	+1.5
1,626,559	+		MPMX19_01551	0.57	-1.3
1,626,559	+		MPMX19_01551	0.57	-1.1
1,626,559	+		MPMX19_01551	0.57	+1.1
1,626,559	+		MPMX19_01551	0.57	+0.3
1,626,559	+		MPMX19_01551	0.57	+1.3
1,626,559	+		MPMX19_01551	0.57	-0.9
1,626,559	+		MPMX19_01551	0.57	-1.5
1,626,560	-		MPMX19_01551	0.57	-1.1
1,626,560	-		MPMX19_01551	0.57	-1.7
1,626,560	-		MPMX19_01551	0.57	-1.2
1,626,560	-		MPMX19_01551	0.57	-0.8
1,626,560	-		MPMX19_01551	0.57	-0.4
1,626,560	-		MPMX19_01551	0.57	-1.1
1,626,560	-		MPMX19_01551	0.57	+0.3
1,626,952	+		MPMX19_01551	0.83	-0.9
1,626,952	+		MPMX19_01551	0.83	-1.7
1,626,952	+		MPMX19_01551	0.83	-1.3
1,626,952	+		MPMX19_01551	0.83	+0.2
1,626,952	+		MPMX19_01551	0.83	-0.1
1,626,952	+		MPMX19_01551	0.83	-0.6
1,626,952	+		MPMX19_01551	0.83	-1.1
1,626,952	+		MPMX19_01551	0.83	-0.3
1,626,952	+		MPMX19_01551	0.83	+0.5
1,626,952	+		MPMX19_01551	0.83	-1.7
1,626,952	+		MPMX19_01551	0.83	+0.1
1,626,952	+		MPMX19_01551	0.83	-0.3
1,626,952	+		MPMX19_01551	0.83	+0.5
1,626,952	+		MPMX19_01551	0.83	-0.0
1,626,952	+		MPMX19_01551	0.83	-0.1
1,626,952	+		MPMX19_01551	0.83	-1.4
1,626,953	-		MPMX19_01551	0.83	-0.9
1,626,953	-		MPMX19_01551	0.83	-0.3
1,626,953	-		MPMX19_01551	0.83	-0.1
1,626,953	-		MPMX19_01551	0.83	+0.1
1,626,953	-		MPMX19_01551	0.83	+1.5
1,626,953	-		MPMX19_01551	0.83	+1.5
1,626,953	-		MPMX19_01551	0.83	-1.1
1,626,953	-		MPMX19_01551	0.83	-0.8
1,626,953	-		MPMX19_01551	0.83	+0.0
1,626,953	-		MPMX19_01551	0.83	+0.2
1,626,953	-		MPMX19_01551	0.83	+0.2
1,626,953	-		MPMX19_01551	0.83	-2.5
1,626,953	-		MPMX19_01551	0.83	-1.5
1,626,953	-		MPMX19_01551	0.83	+0.7
1,626,953	-		MPMX19_01551	0.83	-1.4
1,626,953	-		MPMX19_01551	0.83	-0.5
1,626,953	-		MPMX19_01551	0.83	-0.1
1,626,953	-		MPMX19_01551	0.83	-1.3
1,626,953	-		MPMX19_01551	0.83	-2.3
1,626,953	-		MPMX19_01551	0.83	-1.2
1,626,953	-		MPMX19_01551	0.83	-1.1
1,626,953	-		MPMX19_01551	0.83	+0.5
1,627,220	+				-2.1
1,627,220	+				-0.9
1,627,220	+				-1.4
1,627,221	-				+0.4
1,627,221	-				-2.1
1,627,249	+				-1.1
1,627,249	+				-0.3
1,627,250	-				+0.3
1,627,967	+		MPMX19_01552	0.43	-2.3
1,627,967	+		MPMX19_01552	0.43	-0.2
1,627,967	+		MPMX19_01552	0.43	-1.6
1,627,967	+		MPMX19_01552	0.43	-0.3
1,627,967	+		MPMX19_01552	0.43	-1.7
1,627,967	+		MPMX19_01552	0.43	-0.8
1,627,967	+		MPMX19_01552	0.43	-0.5
1,627,968	-		MPMX19_01552	0.43	-1.5
1,627,968	-		MPMX19_01552	0.43	+0.5
1,627,968	-		MPMX19_01552	0.43	-1.0
1,627,968	-		MPMX19_01552	0.43	+0.2
1,627,968	-		MPMX19_01552	0.43	-0.3
1,627,968	-		MPMX19_01552	0.43	-1.0
1,628,099	+		MPMX19_01552	0.52	-0.5
1,628,099	+		MPMX19_01552	0.52	+1.0
1,628,099	+		MPMX19_01552	0.52	-0.5
1,628,099	+		MPMX19_01552	0.52	+1.2
1,628,099	+		MPMX19_01552	0.52	+0.2
1,628,099	+		MPMX19_01552	0.52	-1.4
1,628,099	+		MPMX19_01552	0.52	-1.8
1,628,100	-		MPMX19_01552	0.52	+0.2
1,628,100	-		MPMX19_01552	0.52	+0.1
1,628,100	-		MPMX19_01552	0.52	-2.6
1,628,100	-		MPMX19_01552	0.52	-1.0
1,628,100	-		MPMX19_01552	0.52	-0.1
1,628,100	-		MPMX19_01552	0.52	-0.1
1,628,100	-		MPMX19_01552	0.52	+0.8
1,628,100	-		MPMX19_01552	0.52	+0.2
1,628,100	-		MPMX19_01552	0.52	+0.7
1,628,100	-		MPMX19_01552	0.52	-2.4
1,628,100	-		MPMX19_01552	0.52	-0.2
1,628,100	-		MPMX19_01552	0.52	+0.2
1,628,100	-		MPMX19_01552	0.52	-0.5
1,628,100	-		MPMX19_01552	0.52	+0.3