Experiment: NL-CCM_agar
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01146 and MPMX19_01147 are separated by 433 nucleotides MPMX19_01147 and MPMX19_01148 are separated by 70 nucleotides
MPMX19_01146: MPMX19_01146 - hypothetical protein, at 1,181,787 to 1,182,998
_01146
MPMX19_01147: MPMX19_01147 - A-factor type gamma-butyrolactone 1'-reductase (1S-forming), at 1,183,432 to 1,184,196
_01147
MPMX19_01148: MPMX19_01148 - Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase, at 1,184,267 to 1,185,835
_01148
Position (kb)
1183
1184
1185 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.613 kb on + strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.614 kb on - strand, within MPMX19_01146 at 1182.877 kb on + strand at 1182.877 kb on + strand at 1182.878 kb on - strand at 1182.904 kb on + strand at 1182.904 kb on + strand at 1182.904 kb on + strand at 1182.904 kb on + strand at 1182.904 kb on + strand at 1182.904 kb on + strand at 1182.904 kb on + strand at 1182.904 kb on + strand at 1182.904 kb on + strand at 1182.904 kb on + strand at 1182.904 kb on + strand at 1182.905 kb on - strand at 1182.905 kb on - strand at 1182.905 kb on - strand at 1182.905 kb on - strand at 1182.905 kb on - strand at 1182.905 kb on - strand at 1182.905 kb on - strand at 1182.905 kb on - strand at 1182.905 kb on - strand at 1182.905 kb on - strand at 1182.905 kb on - strand at 1182.905 kb on - strand at 1182.986 kb on + strand at 1182.986 kb on + strand at 1182.986 kb on + strand at 1183.100 kb on + strand at 1183.100 kb on + strand at 1183.100 kb on + strand at 1183.101 kb on - strand at 1183.101 kb on - strand at 1183.101 kb on - strand at 1183.177 kb on + strand at 1183.177 kb on + strand at 1183.177 kb on + strand at 1183.177 kb on + strand at 1183.178 kb on - strand at 1183.178 kb on - strand at 1183.178 kb on - strand at 1183.178 kb on - strand at 1183.178 kb on - strand at 1183.178 kb on - strand at 1183.178 kb on - strand at 1183.178 kb on - strand at 1183.250 kb on + strand at 1183.250 kb on + strand at 1183.250 kb on + strand at 1183.250 kb on + strand at 1183.250 kb on + strand at 1183.250 kb on + strand at 1183.250 kb on + strand at 1183.250 kb on + strand at 1183.250 kb on + strand at 1183.250 kb on + strand at 1183.250 kb on + strand at 1183.250 kb on + strand at 1183.251 kb on - strand at 1183.251 kb on - strand at 1183.251 kb on - strand at 1183.251 kb on - strand at 1183.251 kb on - strand at 1183.251 kb on - strand at 1183.251 kb on - strand at 1183.251 kb on - strand at 1183.251 kb on - strand at 1183.251 kb on - strand at 1183.251 kb on - strand at 1183.251 kb on - strand at 1183.285 kb on + strand at 1183.330 kb on + strand at 1183.331 kb on - strand at 1183.331 kb on - strand at 1183.771 kb on - strand, within MPMX19_01147 at 1183.771 kb on - strand, within MPMX19_01147 at 1183.873 kb on - strand, within MPMX19_01147 at 1183.873 kb on - strand, within MPMX19_01147 at 1183.901 kb on - strand, within MPMX19_01147 at 1183.954 kb on + strand, within MPMX19_01147 at 1183.954 kb on + strand, within MPMX19_01147 at 1183.954 kb on + strand, within MPMX19_01147 at 1183.954 kb on + strand, within MPMX19_01147 at 1183.954 kb on + strand, within MPMX19_01147 at 1183.955 kb on - strand, within MPMX19_01147 at 1183.955 kb on - strand, within MPMX19_01147 at 1184.005 kb on - strand, within MPMX19_01147 at 1184.085 kb on + strand, within MPMX19_01147 at 1184.085 kb on + strand, within MPMX19_01147 at 1184.085 kb on + strand, within MPMX19_01147 at 1184.085 kb on + strand, within MPMX19_01147 at 1184.085 kb on + strand, within MPMX19_01147 at 1184.086 kb on - strand, within MPMX19_01147 at 1184.086 kb on - strand, within MPMX19_01147 at 1184.086 kb on - strand, within MPMX19_01147 at 1184.086 kb on - strand, within MPMX19_01147 at 1184.086 kb on - strand, within MPMX19_01147 at 1184.086 kb on - strand, within MPMX19_01147 at 1184.086 kb on - strand, within MPMX19_01147 at 1184.086 kb on - strand, within MPMX19_01147 at 1184.086 kb on - strand, within MPMX19_01147 at 1184.086 kb on - strand, within MPMX19_01147 at 1184.116 kb on + strand, within MPMX19_01147 at 1184.116 kb on + strand, within MPMX19_01147 at 1184.116 kb on + strand, within MPMX19_01147 at 1184.116 kb on + strand, within MPMX19_01147 at 1184.116 kb on + strand, within MPMX19_01147 at 1184.116 kb on + strand, within MPMX19_01147 at 1184.116 kb on + strand, within MPMX19_01147 at 1184.117 kb on - strand, within MPMX19_01147 at 1184.254 kb on + strand at 1184.254 kb on + strand at 1184.255 kb on - strand at 1184.255 kb on - strand at 1184.255 kb on - strand at 1184.268 kb on + strand at 1184.571 kb on + strand, within MPMX19_01148 at 1184.571 kb on + strand, within MPMX19_01148 at 1184.634 kb on + strand, within MPMX19_01148 at 1184.635 kb on - strand, within MPMX19_01148 at 1184.878 kb on - strand, within MPMX19_01148 at 1184.878 kb on - strand, within MPMX19_01148 at 1185.078 kb on + strand, within MPMX19_01148 at 1185.078 kb on + strand, within MPMX19_01148 at 1185.078 kb on + strand, within MPMX19_01148 at 1185.078 kb on + strand, within MPMX19_01148 at 1185.078 kb on + strand, within MPMX19_01148 at 1185.078 kb on + strand, within MPMX19_01148 at 1185.078 kb on + strand, within MPMX19_01148 at 1185.078 kb on + strand, within MPMX19_01148 at 1185.078 kb on + strand, within MPMX19_01148 at 1185.078 kb on + strand, within MPMX19_01148 at 1185.078 kb on + strand, within MPMX19_01148 at 1185.078 kb on + strand, within MPMX19_01148 at 1185.079 kb on - strand, within MPMX19_01148 at 1185.079 kb on - strand, within MPMX19_01148 at 1185.079 kb on - strand, within MPMX19_01148 at 1185.079 kb on - strand, within MPMX19_01148 at 1185.079 kb on - strand, within MPMX19_01148 at 1185.079 kb on - strand, within MPMX19_01148 at 1185.079 kb on - strand, within MPMX19_01148 at 1185.079 kb on - strand, within MPMX19_01148 at 1185.079 kb on - strand, within MPMX19_01148 at 1185.079 kb on - strand, within MPMX19_01148 at 1185.079 kb on - strand, within MPMX19_01148 at 1185.079 kb on - strand, within MPMX19_01148 at 1185.118 kb on + strand, within MPMX19_01148 at 1185.118 kb on + strand, within MPMX19_01148 at 1185.118 kb on + strand, within MPMX19_01148 at 1185.119 kb on - strand, within MPMX19_01148 at 1185.119 kb on - strand, within MPMX19_01148 at 1185.119 kb on - strand, within MPMX19_01148 at 1185.119 kb on - strand, within MPMX19_01148 at 1185.119 kb on - strand, within MPMX19_01148 at 1185.119 kb on - strand, within MPMX19_01148 at 1185.119 kb on - strand, within MPMX19_01148 at 1185.160 kb on - strand, within MPMX19_01148
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM_agar remove 1,182,613 + MPMX19_01146 0.68 -1.2 1,182,613 + MPMX19_01146 0.68 +0.0 1,182,613 + MPMX19_01146 0.68 -0.2 1,182,613 + MPMX19_01146 0.68 +0.3 1,182,613 + MPMX19_01146 0.68 -0.5 1,182,613 + MPMX19_01146 0.68 -0.5 1,182,613 + MPMX19_01146 0.68 -0.7 1,182,613 + MPMX19_01146 0.68 +2.2 1,182,613 + MPMX19_01146 0.68 -2.3 1,182,613 + MPMX19_01146 0.68 +1.2 1,182,613 + MPMX19_01146 0.68 +0.4 1,182,613 + MPMX19_01146 0.68 +0.3 1,182,613 + MPMX19_01146 0.68 -0.4 1,182,613 + MPMX19_01146 0.68 +0.9 1,182,613 + MPMX19_01146 0.68 -1.1 1,182,613 + MPMX19_01146 0.68 -0.5 1,182,614 - MPMX19_01146 0.68 -0.8 1,182,614 - MPMX19_01146 0.68 -1.7 1,182,614 - MPMX19_01146 0.68 +1.0 1,182,614 - MPMX19_01146 0.68 -0.9 1,182,614 - MPMX19_01146 0.68 -1.4 1,182,614 - MPMX19_01146 0.68 +0.5 1,182,614 - MPMX19_01146 0.68 +1.3 1,182,614 - MPMX19_01146 0.68 -1.2 1,182,614 - MPMX19_01146 0.68 -0.7 1,182,614 - MPMX19_01146 0.68 -1.8 1,182,614 - MPMX19_01146 0.68 -0.1 1,182,614 - MPMX19_01146 0.68 -0.7 1,182,614 - MPMX19_01146 0.68 +0.4 1,182,614 - MPMX19_01146 0.68 -1.1 1,182,614 - MPMX19_01146 0.68 -0.2 1,182,614 - MPMX19_01146 0.68 +0.2 1,182,877 + +0.2 1,182,877 + +0.2 1,182,878 - -0.3 1,182,904 + -2.0 1,182,904 + -0.7 1,182,904 + +0.5 1,182,904 + -1.2 1,182,904 + +0.3 1,182,904 + -1.6 1,182,904 + -0.6 1,182,904 + +0.2 1,182,904 + +1.1 1,182,904 + +0.3 1,182,904 + -1.2 1,182,905 - -1.4 1,182,905 - -0.9 1,182,905 - +0.7 1,182,905 - -1.7 1,182,905 - +0.5 1,182,905 - -0.5 1,182,905 - +0.3 1,182,905 - -0.1 1,182,905 - -0.3 1,182,905 - -1.5 1,182,905 - -1.2 1,182,905 - +0.2 1,182,986 + +0.2 1,182,986 + +0.1 1,182,986 + -1.5 1,183,100 + +0.1 1,183,100 + -2.0 1,183,100 + -0.7 1,183,101 - -1.4 1,183,101 - +0.7 1,183,101 - +0.5 1,183,177 + +0.6 1,183,177 + +0.7 1,183,177 + -1.3 1,183,177 + -2.0 1,183,178 - -1.7 1,183,178 - -0.1 1,183,178 - -0.2 1,183,178 - -0.4 1,183,178 - +0.3 1,183,178 - +0.5 1,183,178 - -0.1 1,183,178 - -0.9 1,183,250 + -1.2 1,183,250 + -0.8 1,183,250 + +0.0 1,183,250 + -1.5 1,183,250 + +0.4 1,183,250 + +1.1 1,183,250 + -1.8 1,183,250 + -1.7 1,183,250 + -1.0 1,183,250 + +1.3 1,183,250 + -1.5 1,183,250 + -0.4 1,183,251 - -0.6 1,183,251 - -2.2 1,183,251 - -1.0 1,183,251 - -0.5 1,183,251 - -0.8 1,183,251 - -0.5 1,183,251 - -0.5 1,183,251 - +0.7 1,183,251 - +0.1 1,183,251 - +0.6 1,183,251 - -0.2 1,183,251 - -2.5 1,183,285 + -0.8 1,183,330 + -1.1 1,183,331 - -1.0 1,183,331 - -0.1 1,183,771 - MPMX19_01147 0.44 -1.1 1,183,771 - MPMX19_01147 0.44 -1.7 1,183,873 - MPMX19_01147 0.58 -0.3 1,183,873 - MPMX19_01147 0.58 +0.8 1,183,901 - MPMX19_01147 0.61 -0.1 1,183,954 + MPMX19_01147 0.68 -1.1 1,183,954 + MPMX19_01147 0.68 +0.0 1,183,954 + MPMX19_01147 0.68 +0.8 1,183,954 + MPMX19_01147 0.68 +1.2 1,183,954 + MPMX19_01147 0.68 +0.0 1,183,955 - MPMX19_01147 0.68 +0.3 1,183,955 - MPMX19_01147 0.68 +0.6 1,184,005 - MPMX19_01147 0.75 -0.0 1,184,085 + MPMX19_01147 0.85 -0.4 1,184,085 + MPMX19_01147 0.85 +0.7 1,184,085 + MPMX19_01147 0.85 -1.0 1,184,085 + MPMX19_01147 0.85 -0.7 1,184,085 + MPMX19_01147 0.85 -0.4 1,184,086 - MPMX19_01147 0.85 +0.3 1,184,086 - MPMX19_01147 0.85 +0.3 1,184,086 - MPMX19_01147 0.85 +0.1 1,184,086 - MPMX19_01147 0.85 +0.5 1,184,086 - MPMX19_01147 0.85 -0.3 1,184,086 - MPMX19_01147 0.85 +1.5 1,184,086 - MPMX19_01147 0.85 -0.4 1,184,086 - MPMX19_01147 0.85 -1.3 1,184,086 - MPMX19_01147 0.85 -0.3 1,184,086 - MPMX19_01147 0.85 -0.0 1,184,116 + MPMX19_01147 0.89 -1.8 1,184,116 + MPMX19_01147 0.89 -2.1 1,184,116 + MPMX19_01147 0.89 +0.3 1,184,116 + MPMX19_01147 0.89 -0.6 1,184,116 + MPMX19_01147 0.89 -0.1 1,184,116 + MPMX19_01147 0.89 +0.8 1,184,116 + MPMX19_01147 0.89 -0.1 1,184,117 - MPMX19_01147 0.90 -1.2 1,184,254 + -0.5 1,184,254 + +1.9 1,184,255 - +1.2 1,184,255 - +0.3 1,184,255 - +0.9 1,184,268 + -0.5 1,184,571 + MPMX19_01148 0.19 -1.6 1,184,571 + MPMX19_01148 0.19 +0.5 1,184,634 + MPMX19_01148 0.23 -1.3 1,184,635 - MPMX19_01148 0.23 -0.5 1,184,878 - MPMX19_01148 0.39 -1.3 1,184,878 - MPMX19_01148 0.39 +0.4 1,185,078 + MPMX19_01148 0.52 -2.4 1,185,078 + MPMX19_01148 0.52 +0.7 1,185,078 + MPMX19_01148 0.52 -0.7 1,185,078 + MPMX19_01148 0.52 -1.8 1,185,078 + MPMX19_01148 0.52 +0.7 1,185,078 + MPMX19_01148 0.52 -1.1 1,185,078 + MPMX19_01148 0.52 -0.5 1,185,078 + MPMX19_01148 0.52 +0.6 1,185,078 + MPMX19_01148 0.52 -1.8 1,185,078 + MPMX19_01148 0.52 -1.6 1,185,078 + MPMX19_01148 0.52 -0.1 1,185,078 + MPMX19_01148 0.52 +0.1 1,185,079 - MPMX19_01148 0.52 -3.0 1,185,079 - MPMX19_01148 0.52 +0.4 1,185,079 - MPMX19_01148 0.52 -0.1 1,185,079 - MPMX19_01148 0.52 +0.3 1,185,079 - MPMX19_01148 0.52 +1.5 1,185,079 - MPMX19_01148 0.52 -2.0 1,185,079 - MPMX19_01148 0.52 -0.9 1,185,079 - MPMX19_01148 0.52 -0.5 1,185,079 - MPMX19_01148 0.52 +0.5 1,185,079 - MPMX19_01148 0.52 -1.5 1,185,079 - MPMX19_01148 0.52 -0.3 1,185,079 - MPMX19_01148 0.52 +0.3 1,185,118 + MPMX19_01148 0.54 -0.5 1,185,118 + MPMX19_01148 0.54 -1.1 1,185,118 + MPMX19_01148 0.54 +0.0 1,185,119 - MPMX19_01148 0.54 -0.5 1,185,119 - MPMX19_01148 0.54 +0.4 1,185,119 - MPMX19_01148 0.54 -0.8 1,185,119 - MPMX19_01148 0.54 +0.1 1,185,119 - MPMX19_01148 0.54 -1.1 1,185,119 - MPMX19_01148 0.54 +0.5 1,185,119 - MPMX19_01148 0.54 +0.0 1,185,160 - MPMX19_01148 0.57 -0.1
Or see this region's nucleotide sequence