Experiment: D-Glucose and Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF412 and GFF413 are separated by 94 nucleotides GFF413 and GFF414 are separated by 21 nucleotides GFF414 and GFF415 are separated by 312 nucleotides
GFF412 - O-acetyl-L-homoserine sulfhydrylase, at 455,682 to 456,953
GFF412
GFF413 - putative FMNH2-dependent monooxygenase SfnC, at 457,048 to 458,277
GFF413
GFF414 - Outer membrane protein W, at 458,299 to 458,931
GFF414
GFF415 - Riboflavin biosynthesis protein RibBA, at 459,244 to 459,849
GFF415
Position (kb) 457
458
459 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 456.071 kb on + strand, within GFF412 at 456.071 kb on + strand, within GFF412 at 456.071 kb on + strand, within GFF412 at 456.071 kb on + strand, within GFF412 at 456.071 kb on + strand, within GFF412 at 456.129 kb on - strand, within GFF412 at 456.187 kb on + strand, within GFF412 at 456.202 kb on - strand, within GFF412 at 456.202 kb on - strand, within GFF412 at 456.210 kb on + strand, within GFF412 at 456.211 kb on - strand, within GFF412 at 456.211 kb on - strand, within GFF412 at 456.211 kb on - strand, within GFF412 at 456.211 kb on - strand, within GFF412 at 456.211 kb on - strand, within GFF412 at 456.214 kb on + strand, within GFF412 at 456.214 kb on + strand, within GFF412 at 456.214 kb on + strand, within GFF412 at 456.214 kb on + strand, within GFF412 at 456.214 kb on + strand, within GFF412 at 456.214 kb on + strand, within GFF412 at 456.214 kb on + strand, within GFF412 at 456.215 kb on - strand, within GFF412 at 456.215 kb on - strand, within GFF412 at 456.215 kb on - strand, within GFF412 at 456.215 kb on - strand, within GFF412 at 456.215 kb on - strand, within GFF412 at 456.215 kb on - strand, within GFF412 at 456.229 kb on + strand, within GFF412 at 456.229 kb on + strand, within GFF412 at 456.229 kb on + strand, within GFF412 at 456.340 kb on + strand, within GFF412 at 456.340 kb on + strand, within GFF412 at 456.341 kb on - strand, within GFF412 at 456.341 kb on - strand, within GFF412 at 456.341 kb on - strand, within GFF412 at 456.365 kb on + strand, within GFF412 at 456.477 kb on + strand, within GFF412 at 456.478 kb on - strand, within GFF412 at 456.478 kb on - strand, within GFF412 at 456.498 kb on + strand, within GFF412 at 456.499 kb on - strand, within GFF412 at 456.499 kb on - strand, within GFF412 at 456.585 kb on + strand, within GFF412 at 456.585 kb on + strand, within GFF412 at 456.622 kb on + strand, within GFF412 at 456.622 kb on + strand, within GFF412 at 456.622 kb on + strand, within GFF412 at 456.622 kb on + strand, within GFF412 at 456.622 kb on + strand, within GFF412 at 456.623 kb on - strand, within GFF412 at 456.623 kb on - strand, within GFF412 at 456.623 kb on - strand, within GFF412 at 456.656 kb on + strand, within GFF412 at 456.656 kb on + strand, within GFF412 at 456.656 kb on + strand, within GFF412 at 456.657 kb on - strand, within GFF412 at 456.657 kb on - strand, within GFF412 at 456.657 kb on - strand, within GFF412 at 456.657 kb on - strand, within GFF412 at 456.657 kb on - strand, within GFF412 at 456.733 kb on - strand, within GFF412 at 456.777 kb on - strand, within GFF412 at 456.799 kb on + strand, within GFF412 at 456.799 kb on + strand, within GFF412 at 456.799 kb on + strand, within GFF412 at 456.799 kb on + strand, within GFF412 at 456.800 kb on - strand, within GFF412 at 456.800 kb on - strand, within GFF412 at 456.800 kb on - strand, within GFF412 at 456.803 kb on + strand, within GFF412 at 456.803 kb on + strand, within GFF412 at 456.813 kb on + strand, within GFF412 at 456.814 kb on - strand, within GFF412 at 456.814 kb on - strand, within GFF412 at 456.862 kb on + strand at 456.862 kb on + strand at 456.968 kb on - strand at 456.970 kb on + strand at 456.970 kb on + strand at 456.970 kb on + strand at 456.971 kb on - strand at 456.971 kb on - strand at 456.984 kb on + strand at 456.985 kb on - strand at 456.988 kb on - strand at 456.990 kb on - strand at 456.990 kb on - strand at 456.990 kb on - strand at 456.996 kb on - strand at 456.996 kb on - strand at 456.999 kb on - strand at 457.003 kb on + strand at 457.003 kb on + strand at 457.004 kb on - strand at 457.005 kb on + strand at 457.028 kb on + strand at 457.030 kb on + strand at 457.030 kb on + strand at 457.030 kb on + strand at 457.031 kb on - strand at 457.041 kb on + strand at 457.041 kb on + strand at 457.041 kb on + strand at 457.041 kb on + strand at 457.042 kb on - strand at 457.042 kb on - strand at 457.042 kb on - strand at 457.042 kb on - strand at 457.049 kb on + strand at 457.049 kb on + strand at 457.049 kb on + strand at 457.049 kb on + strand at 457.049 kb on + strand at 457.050 kb on - strand at 457.050 kb on - strand at 457.050 kb on - strand at 457.050 kb on - strand at 457.051 kb on + strand at 457.052 kb on - strand at 457.052 kb on - strand at 457.052 kb on - strand at 457.052 kb on - strand at 457.088 kb on + strand at 457.089 kb on - strand at 457.091 kb on + strand at 457.091 kb on + strand at 457.091 kb on + strand at 457.092 kb on - strand at 457.092 kb on - strand at 457.138 kb on - strand at 457.231 kb on + strand, within GFF413 at 457.232 kb on - strand, within GFF413 at 457.232 kb on - strand, within GFF413 at 457.253 kb on - strand, within GFF413 at 457.253 kb on - strand, within GFF413 at 457.441 kb on + strand, within GFF413 at 457.441 kb on + strand, within GFF413 at 457.441 kb on + strand, within GFF413 at 457.441 kb on + strand, within GFF413 at 457.442 kb on - strand, within GFF413 at 457.469 kb on + strand, within GFF413 at 457.470 kb on - strand, within GFF413 at 457.470 kb on - strand, within GFF413 at 457.528 kb on - strand, within GFF413 at 457.606 kb on + strand, within GFF413 at 457.690 kb on - strand, within GFF413 at 457.712 kb on + strand, within GFF413 at 457.713 kb on - strand, within GFF413 at 457.978 kb on + strand, within GFF413 at 458.061 kb on - strand, within GFF413 at 458.176 kb on + strand at 458.262 kb on + strand at 458.263 kb on - strand at 458.319 kb on + strand at 458.319 kb on + strand at 458.319 kb on + strand at 458.446 kb on + strand, within GFF414 at 458.447 kb on - strand, within GFF414 at 458.531 kb on + strand, within GFF414 at 458.531 kb on + strand, within GFF414 at 458.531 kb on + strand, within GFF414 at 458.532 kb on - strand, within GFF414 at 458.532 kb on - strand, within GFF414 at 458.532 kb on - strand, within GFF414 at 458.560 kb on + strand, within GFF414 at 458.705 kb on + strand, within GFF414 at 458.705 kb on + strand, within GFF414 at 458.705 kb on + strand, within GFF414 at 458.706 kb on - strand, within GFF414 at 458.718 kb on + strand, within GFF414 at 458.719 kb on - strand, within GFF414 at 458.819 kb on - strand, within GFF414 at 458.819 kb on - strand, within GFF414 at 458.819 kb on - strand, within GFF414 at 458.819 kb on - strand, within GFF414 at 458.862 kb on + strand, within GFF414 at 458.934 kb on + strand at 458.934 kb on + strand at 458.973 kb on + strand at 458.974 kb on - strand at 458.987 kb on + strand at 458.987 kb on + strand at 458.988 kb on - strand at 459.005 kb on + strand at 459.006 kb on - strand at 459.065 kb on + strand at 459.081 kb on - strand at 459.081 kb on - strand at 459.215 kb on + strand at 459.216 kb on - strand at 459.216 kb on - strand at 459.219 kb on + strand at 459.219 kb on + strand at 459.220 kb on - strand at 459.231 kb on - strand at 459.246 kb on - strand at 459.253 kb on + strand at 459.254 kb on - strand at 459.265 kb on + strand at 459.265 kb on + strand at 459.266 kb on - strand at 459.266 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and Methanol (C) remove 456,071 + GFF412 0.31 -1.1 456,071 + GFF412 0.31 -1.5 456,071 + GFF412 0.31 +0.6 456,071 + GFF412 0.31 -0.4 456,071 + GFF412 0.31 -0.1 456,129 - GFF412 0.35 -0.5 456,187 + GFF412 0.40 -0.4 456,202 - GFF412 0.41 +1.2 456,202 - GFF412 0.41 -1.6 456,210 + GFF412 0.42 -1.1 456,211 - GFF412 0.42 -0.3 456,211 - GFF412 0.42 -0.2 456,211 - GFF412 0.42 +0.2 456,211 - GFF412 0.42 +0.2 456,211 - GFF412 0.42 -0.1 456,214 + GFF412 0.42 -0.7 456,214 + GFF412 0.42 -0.1 456,214 + GFF412 0.42 -0.8 456,214 + GFF412 0.42 -0.8 456,214 + GFF412 0.42 -2.0 456,214 + GFF412 0.42 -0.1 456,214 + GFF412 0.42 +0.2 456,215 - GFF412 0.42 +0.2 456,215 - GFF412 0.42 -1.0 456,215 - GFF412 0.42 +0.4 456,215 - GFF412 0.42 +0.8 456,215 - GFF412 0.42 +0.5 456,215 - GFF412 0.42 -0.7 456,229 + GFF412 0.43 -0.4 456,229 + GFF412 0.43 -0.6 456,229 + GFF412 0.43 -1.8 456,340 + GFF412 0.52 -0.6 456,340 + GFF412 0.52 -1.5 456,341 - GFF412 0.52 -1.6 456,341 - GFF412 0.52 -0.7 456,341 - GFF412 0.52 -0.6 456,365 + GFF412 0.54 -0.2 456,477 + GFF412 0.62 -0.8 456,478 - GFF412 0.63 -0.3 456,478 - GFF412 0.63 +0.4 456,498 + GFF412 0.64 -0.6 456,499 - GFF412 0.64 -1.5 456,499 - GFF412 0.64 -1.6 456,585 + GFF412 0.71 -0.2 456,585 + GFF412 0.71 -0.6 456,622 + GFF412 0.74 +0.8 456,622 + GFF412 0.74 -0.4 456,622 + GFF412 0.74 -1.4 456,622 + GFF412 0.74 -0.1 456,622 + GFF412 0.74 -1.3 456,623 - GFF412 0.74 -0.7 456,623 - GFF412 0.74 +0.5 456,623 - GFF412 0.74 -2.5 456,656 + GFF412 0.77 -0.8 456,656 + GFF412 0.77 -0.6 456,656 + GFF412 0.77 -1.4 456,657 - GFF412 0.77 -1.6 456,657 - GFF412 0.77 -0.5 456,657 - GFF412 0.77 -0.1 456,657 - GFF412 0.77 +0.1 456,657 - GFF412 0.77 -0.5 456,733 - GFF412 0.83 -0.8 456,777 - GFF412 0.86 -0.4 456,799 + GFF412 0.88 -1.1 456,799 + GFF412 0.88 -1.0 456,799 + GFF412 0.88 -0.8 456,799 + GFF412 0.88 +0.2 456,800 - GFF412 0.88 -0.7 456,800 - GFF412 0.88 -1.0 456,800 - GFF412 0.88 -2.1 456,803 + GFF412 0.88 -2.0 456,803 + GFF412 0.88 -1.5 456,813 + GFF412 0.89 -1.4 456,814 - GFF412 0.89 -1.2 456,814 - GFF412 0.89 +0.2 456,862 + -2.3 456,862 + +0.0 456,968 - -1.4 456,970 + -2.8 456,970 + -0.4 456,970 + +0.6 456,971 - +0.2 456,971 - -0.4 456,984 + +0.2 456,985 - -0.4 456,988 - -2.1 456,990 - -0.6 456,990 - -1.4 456,990 - -1.5 456,996 - -0.9 456,996 - -0.4 456,999 - -1.3 457,003 + +0.8 457,003 + -0.6 457,004 - -0.8 457,005 + -1.6 457,028 + -2.5 457,030 + -0.6 457,030 + -0.8 457,030 + -0.8 457,031 - -1.4 457,041 + +0.7 457,041 + -0.7 457,041 + -1.3 457,041 + -0.4 457,042 - -0.9 457,042 - +0.9 457,042 - -0.2 457,042 - -0.4 457,049 + +0.0 457,049 + -0.1 457,049 + +0.4 457,049 + -1.1 457,049 + -1.2 457,050 - -0.3 457,050 - -0.4 457,050 - -1.1 457,050 - -0.6 457,051 + +0.4 457,052 - -0.0 457,052 - +0.8 457,052 - -0.8 457,052 - -0.8 457,088 + -0.0 457,089 - -1.8 457,091 + +0.5 457,091 + +1.2 457,091 + -0.8 457,092 - -0.4 457,092 - -0.6 457,138 - -0.1 457,231 + GFF413 0.15 -1.1 457,232 - GFF413 0.15 -1.6 457,232 - GFF413 0.15 -0.8 457,253 - GFF413 0.17 -0.9 457,253 - GFF413 0.17 +0.4 457,441 + GFF413 0.32 +0.0 457,441 + GFF413 0.32 -1.1 457,441 + GFF413 0.32 -0.3 457,441 + GFF413 0.32 -1.1 457,442 - GFF413 0.32 -0.8 457,469 + GFF413 0.34 -0.1 457,470 - GFF413 0.34 -0.6 457,470 - GFF413 0.34 -1.4 457,528 - GFF413 0.39 +0.4 457,606 + GFF413 0.45 -0.8 457,690 - GFF413 0.52 +0.2 457,712 + GFF413 0.54 -0.8 457,713 - GFF413 0.54 -0.4 457,978 + GFF413 0.76 -0.1 458,061 - GFF413 0.82 -0.9 458,176 + -1.8 458,262 + -0.1 458,263 - +1.2 458,319 + -1.6 458,319 + -2.5 458,319 + -1.1 458,446 + GFF414 0.23 -0.6 458,447 - GFF414 0.23 -0.6 458,531 + GFF414 0.37 -0.1 458,531 + GFF414 0.37 -0.2 458,531 + GFF414 0.37 -0.2 458,532 - GFF414 0.37 +0.6 458,532 - GFF414 0.37 -1.6 458,532 - GFF414 0.37 -0.5 458,560 + GFF414 0.41 +0.4 458,705 + GFF414 0.64 -1.0 458,705 + GFF414 0.64 -1.1 458,705 + GFF414 0.64 -0.8 458,706 - GFF414 0.64 -0.2 458,718 + GFF414 0.66 -0.1 458,719 - GFF414 0.66 +0.4 458,819 - GFF414 0.82 +0.2 458,819 - GFF414 0.82 -0.8 458,819 - GFF414 0.82 -0.1 458,819 - GFF414 0.82 +0.3 458,862 + GFF414 0.89 -1.1 458,934 + -0.6 458,934 + -1.4 458,973 + +0.2 458,974 - -0.4 458,987 + -1.1 458,987 + -1.1 458,988 - -0.4 459,005 + -0.9 459,006 - -0.9 459,065 + -0.5 459,081 - -0.1 459,081 - -0.6 459,215 + +0.2 459,216 - -1.1 459,216 - +0.3 459,219 + +0.8 459,219 + +0.2 459,220 - -0.4 459,231 - -1.5 459,246 - +0.2 459,253 + +0.0 459,254 - -0.6 459,265 + -0.1 459,265 + -0.8 459,266 - +0.6 459,266 - +0.8
Or see this region's nucleotide sequence