Experiment: D-Glucose and Methanol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2102 and GFF2103 are separated by 207 nucleotides GFF2103 and GFF2104 are separated by 4 nucleotides GFF2104 and GFF2105 are separated by 9 nucleotides
GFF2102 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG, at 146,260 to 148,200
GFF2102
GFF2103 - Cytochrome c'', at 148,408 to 148,842
GFF2103
GFF2104 - hypothetical protein, at 148,847 to 149,431
GFF2104
GFF2105 - tRNA modification GTPase MnmE, at 149,441 to 150,796
GFF2105
Position (kb) 148
149 Strain fitness (log2 ratio) -2
-1
0
1 at 148.201 kb on - strand at 148.256 kb on + strand at 148.256 kb on + strand at 148.256 kb on + strand at 148.257 kb on - strand at 148.257 kb on - strand at 148.268 kb on + strand at 148.269 kb on - strand at 148.269 kb on - strand at 148.290 kb on + strand at 148.290 kb on + strand at 148.291 kb on - strand at 148.291 kb on - strand at 148.291 kb on - strand at 148.305 kb on + strand at 148.306 kb on - strand at 148.312 kb on + strand at 148.312 kb on + strand at 148.312 kb on + strand at 148.312 kb on + strand at 148.313 kb on - strand at 148.313 kb on - strand at 148.323 kb on + strand at 148.333 kb on - strand at 148.350 kb on + strand at 148.358 kb on + strand at 148.359 kb on - strand at 148.363 kb on + strand at 148.363 kb on + strand at 148.385 kb on - strand at 148.401 kb on + strand at 148.401 kb on + strand at 148.401 kb on + strand at 148.402 kb on - strand at 148.404 kb on + strand at 148.404 kb on + strand at 148.495 kb on + strand, within GFF2103 at 148.495 kb on + strand, within GFF2103 at 148.495 kb on + strand, within GFF2103 at 148.495 kb on + strand, within GFF2103 at 148.495 kb on + strand, within GFF2103 at 148.495 kb on + strand, within GFF2103 at 148.501 kb on + strand, within GFF2103 at 148.501 kb on + strand, within GFF2103 at 148.501 kb on + strand, within GFF2103 at 148.502 kb on - strand, within GFF2103 at 148.503 kb on + strand, within GFF2103 at 148.503 kb on + strand, within GFF2103 at 148.534 kb on + strand, within GFF2103 at 148.534 kb on + strand, within GFF2103 at 148.535 kb on - strand, within GFF2103 at 148.552 kb on - strand, within GFF2103 at 148.593 kb on + strand, within GFF2103 at 148.599 kb on + strand, within GFF2103 at 148.600 kb on - strand, within GFF2103 at 148.629 kb on + strand, within GFF2103 at 148.629 kb on + strand, within GFF2103 at 148.701 kb on + strand, within GFF2103 at 148.702 kb on - strand, within GFF2103 at 148.725 kb on + strand, within GFF2103 at 148.730 kb on + strand, within GFF2103 at 148.730 kb on + strand, within GFF2103 at 148.730 kb on + strand, within GFF2103 at 148.731 kb on - strand, within GFF2103 at 148.761 kb on + strand, within GFF2103 at 148.803 kb on + strand at 148.810 kb on + strand at 148.810 kb on + strand at 148.810 kb on + strand at 148.811 kb on - strand at 148.833 kb on + strand at 148.840 kb on + strand at 148.840 kb on + strand at 148.851 kb on + strand at 148.851 kb on + strand at 148.851 kb on + strand at 148.851 kb on + strand at 148.851 kb on + strand at 148.851 kb on + strand at 148.852 kb on - strand at 148.856 kb on + strand at 148.856 kb on + strand at 148.875 kb on + strand at 148.913 kb on + strand, within GFF2104 at 148.922 kb on + strand, within GFF2104 at 148.922 kb on + strand, within GFF2104 at 148.925 kb on - strand, within GFF2104 at 148.950 kb on + strand, within GFF2104 at 148.951 kb on - strand, within GFF2104 at 148.961 kb on + strand, within GFF2104 at 148.962 kb on - strand, within GFF2104 at 148.971 kb on - strand, within GFF2104 at 149.014 kb on + strand, within GFF2104 at 149.014 kb on + strand, within GFF2104 at 149.014 kb on + strand, within GFF2104 at 149.014 kb on + strand, within GFF2104 at 149.041 kb on + strand, within GFF2104 at 149.041 kb on + strand, within GFF2104 at 149.081 kb on + strand, within GFF2104 at 149.089 kb on + strand, within GFF2104 at 149.111 kb on + strand, within GFF2104 at 149.111 kb on + strand, within GFF2104 at 149.113 kb on + strand, within GFF2104 at 149.128 kb on + strand, within GFF2104 at 149.128 kb on + strand, within GFF2104 at 149.128 kb on + strand, within GFF2104 at 149.147 kb on + strand, within GFF2104 at 149.147 kb on + strand, within GFF2104 at 149.178 kb on + strand, within GFF2104 at 149.179 kb on - strand, within GFF2104 at 149.198 kb on + strand, within GFF2104 at 149.198 kb on + strand, within GFF2104 at 149.198 kb on + strand, within GFF2104 at 149.199 kb on - strand, within GFF2104 at 149.200 kb on + strand, within GFF2104 at 149.200 kb on + strand, within GFF2104 at 149.200 kb on + strand, within GFF2104 at 149.200 kb on + strand, within GFF2104 at 149.200 kb on + strand, within GFF2104 at 149.218 kb on + strand, within GFF2104 at 149.244 kb on + strand, within GFF2104 at 149.244 kb on + strand, within GFF2104 at 149.252 kb on + strand, within GFF2104 at 149.252 kb on + strand, within GFF2104 at 149.252 kb on + strand, within GFF2104 at 149.252 kb on + strand, within GFF2104 at 149.252 kb on + strand, within GFF2104 at 149.253 kb on - strand, within GFF2104 at 149.253 kb on - strand, within GFF2104 at 149.350 kb on + strand, within GFF2104 at 149.350 kb on + strand, within GFF2104 at 149.360 kb on - strand, within GFF2104 at 149.360 kb on - strand, within GFF2104 at 149.374 kb on + strand at 149.375 kb on - strand at 149.442 kb on + strand at 149.443 kb on - strand at 149.537 kb on + strand at 149.538 kb on - strand at 149.589 kb on - strand, within GFF2105 at 149.600 kb on + strand, within GFF2105 at 149.709 kb on - strand, within GFF2105 at 149.709 kb on - strand, within GFF2105
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and Methanol (C) remove 148,201 - -0.6 148,256 + -1.0 148,256 + +0.2 148,256 + +0.4 148,257 - -1.0 148,257 - +1.0 148,268 + -1.1 148,269 - +0.1 148,269 - -1.0 148,290 + +1.1 148,290 + -0.6 148,291 - -0.5 148,291 - -1.5 148,291 - -1.0 148,305 + -0.4 148,306 - +0.4 148,312 + +1.4 148,312 + -0.9 148,312 + +0.1 148,312 + +0.4 148,313 - +0.0 148,313 - +0.0 148,323 + -0.9 148,333 - +0.2 148,350 + -0.5 148,358 + -0.2 148,359 - +0.0 148,363 + -1.1 148,363 + -1.0 148,385 - -0.8 148,401 + -1.1 148,401 + -0.6 148,401 + -0.6 148,402 - -0.3 148,404 + -1.5 148,404 + +0.6 148,495 + GFF2103 0.20 -0.6 148,495 + GFF2103 0.20 -0.8 148,495 + GFF2103 0.20 +1.0 148,495 + GFF2103 0.20 -0.1 148,495 + GFF2103 0.20 -0.7 148,495 + GFF2103 0.20 -0.2 148,501 + GFF2103 0.21 +1.4 148,501 + GFF2103 0.21 -0.7 148,501 + GFF2103 0.21 -1.2 148,502 - GFF2103 0.22 -1.2 148,503 + GFF2103 0.22 -1.0 148,503 + GFF2103 0.22 -2.4 148,534 + GFF2103 0.29 +1.4 148,534 + GFF2103 0.29 -0.8 148,535 - GFF2103 0.29 -2.5 148,552 - GFF2103 0.33 +0.6 148,593 + GFF2103 0.43 -0.2 148,599 + GFF2103 0.44 -0.3 148,600 - GFF2103 0.44 -1.0 148,629 + GFF2103 0.51 -0.5 148,629 + GFF2103 0.51 +1.4 148,701 + GFF2103 0.67 -1.2 148,702 - GFF2103 0.68 +0.4 148,725 + GFF2103 0.73 -1.3 148,730 + GFF2103 0.74 -1.2 148,730 + GFF2103 0.74 +1.0 148,730 + GFF2103 0.74 +0.3 148,731 - GFF2103 0.74 +0.4 148,761 + GFF2103 0.81 +0.5 148,803 + -0.2 148,810 + -0.2 148,810 + -0.4 148,810 + -1.0 148,811 - -0.6 148,833 + -1.0 148,840 + -0.5 148,840 + +0.4 148,851 + -0.8 148,851 + -1.0 148,851 + +0.0 148,851 + -0.8 148,851 + +0.0 148,851 + -1.2 148,852 - -1.0 148,856 + -1.0 148,856 + -0.7 148,875 + -0.9 148,913 + GFF2104 0.11 +0.0 148,922 + GFF2104 0.13 -1.9 148,922 + GFF2104 0.13 -0.2 148,925 - GFF2104 0.13 -0.6 148,950 + GFF2104 0.18 +0.2 148,951 - GFF2104 0.18 -1.5 148,961 + GFF2104 0.19 -2.6 148,962 - GFF2104 0.20 -0.6 148,971 - GFF2104 0.21 +1.4 149,014 + GFF2104 0.29 -1.0 149,014 + GFF2104 0.29 -0.2 149,014 + GFF2104 0.29 -0.4 149,014 + GFF2104 0.29 +0.5 149,041 + GFF2104 0.33 -1.7 149,041 + GFF2104 0.33 -1.0 149,081 + GFF2104 0.40 -1.0 149,089 + GFF2104 0.41 -1.2 149,111 + GFF2104 0.45 -1.0 149,111 + GFF2104 0.45 +0.1 149,113 + GFF2104 0.45 -1.4 149,128 + GFF2104 0.48 -0.2 149,128 + GFF2104 0.48 -1.1 149,128 + GFF2104 0.48 -0.8 149,147 + GFF2104 0.51 +0.2 149,147 + GFF2104 0.51 -0.4 149,178 + GFF2104 0.57 +0.4 149,179 - GFF2104 0.57 -0.3 149,198 + GFF2104 0.60 -1.2 149,198 + GFF2104 0.60 -0.2 149,198 + GFF2104 0.60 -0.5 149,199 - GFF2104 0.60 -0.6 149,200 + GFF2104 0.60 -0.4 149,200 + GFF2104 0.60 -0.6 149,200 + GFF2104 0.60 +1.4 149,200 + GFF2104 0.60 -1.5 149,200 + GFF2104 0.60 -0.4 149,218 + GFF2104 0.63 +0.9 149,244 + GFF2104 0.68 +0.5 149,244 + GFF2104 0.68 -0.5 149,252 + GFF2104 0.69 -1.5 149,252 + GFF2104 0.69 -1.2 149,252 + GFF2104 0.69 -0.7 149,252 + GFF2104 0.69 +0.0 149,252 + GFF2104 0.69 -1.6 149,253 - GFF2104 0.69 +1.0 149,253 - GFF2104 0.69 -0.4 149,350 + GFF2104 0.86 -0.3 149,350 + GFF2104 0.86 +0.0 149,360 - GFF2104 0.88 +0.1 149,360 - GFF2104 0.88 +0.6 149,374 + -1.1 149,375 - -0.6 149,442 + -1.5 149,443 - -0.4 149,537 + -1.0 149,538 - -0.6 149,589 - GFF2105 0.11 +0.4 149,600 + GFF2105 0.12 +0.0 149,709 - GFF2105 0.20 -1.0 149,709 - GFF2105 0.20 -1.0
Or see this region's nucleotide sequence