Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06971 and MPMX19_06972 are separated by 38 nucleotides MPMX19_06972 and MPMX19_06973 are separated by 39 nucleotides
MPMX19_06971: MPMX19_06971 - Macrolide export ATP-binding/permease protein MacB, at 247,719 to 248,921
_06971
MPMX19_06972: MPMX19_06972 - hypothetical protein, at 248,960 to 250,144
_06972
MPMX19_06973: MPMX19_06973 - 2-methylfumaryl-CoA isomerase, at 250,184 to 251,389
_06973
Position (kb)
248
249
250
251 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 248.267 kb on + strand, within MPMX19_06971 at 248.267 kb on + strand, within MPMX19_06971 at 248.267 kb on + strand, within MPMX19_06971 at 248.268 kb on - strand, within MPMX19_06971 at 248.769 kb on + strand, within MPMX19_06971 at 248.769 kb on + strand, within MPMX19_06971 at 248.769 kb on + strand, within MPMX19_06971 at 248.769 kb on + strand, within MPMX19_06971 at 248.769 kb on + strand, within MPMX19_06971 at 248.770 kb on - strand, within MPMX19_06971 at 248.770 kb on - strand, within MPMX19_06971 at 248.770 kb on - strand, within MPMX19_06971 at 248.770 kb on - strand, within MPMX19_06971 at 248.770 kb on - strand, within MPMX19_06971 at 248.770 kb on - strand, within MPMX19_06971 at 249.287 kb on + strand, within MPMX19_06972 at 249.287 kb on + strand, within MPMX19_06972 at 249.341 kb on - strand, within MPMX19_06972 at 249.346 kb on + strand, within MPMX19_06972 at 249.346 kb on + strand, within MPMX19_06972 at 249.346 kb on + strand, within MPMX19_06972 at 249.346 kb on + strand, within MPMX19_06972 at 249.346 kb on + strand, within MPMX19_06972 at 249.347 kb on - strand, within MPMX19_06972 at 249.347 kb on - strand, within MPMX19_06972 at 249.347 kb on - strand, within MPMX19_06972 at 249.347 kb on - strand, within MPMX19_06972 at 249.545 kb on + strand, within MPMX19_06972 at 249.545 kb on + strand, within MPMX19_06972 at 249.546 kb on - strand, within MPMX19_06972 at 249.546 kb on - strand, within MPMX19_06972 at 249.546 kb on - strand, within MPMX19_06972 at 249.546 kb on - strand, within MPMX19_06972 at 249.546 kb on - strand, within MPMX19_06972 at 249.546 kb on - strand, within MPMX19_06972 at 249.779 kb on - strand, within MPMX19_06972 at 250.653 kb on + strand, within MPMX19_06973 at 250.707 kb on + strand, within MPMX19_06973 at 250.707 kb on + strand, within MPMX19_06973 at 250.716 kb on + strand, within MPMX19_06973 at 250.716 kb on + strand, within MPMX19_06973 at 250.716 kb on + strand, within MPMX19_06973 at 250.717 kb on - strand, within MPMX19_06973 at 250.887 kb on + strand, within MPMX19_06973 at 250.888 kb on - strand, within MPMX19_06973 at 250.888 kb on - strand, within MPMX19_06973 at 250.986 kb on + strand, within MPMX19_06973 at 250.986 kb on + strand, within MPMX19_06973 at 250.986 kb on + strand, within MPMX19_06973 at 250.986 kb on + strand, within MPMX19_06973 at 250.986 kb on + strand, within MPMX19_06973 at 250.987 kb on - strand, within MPMX19_06973 at 250.987 kb on - strand, within MPMX19_06973 at 250.987 kb on - strand, within MPMX19_06973 at 250.987 kb on - strand, within MPMX19_06973
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 248,267 + MPMX19_06971 0.46 +0.1 248,267 + MPMX19_06971 0.46 -1.7 248,267 + MPMX19_06971 0.46 -0.2 248,268 - MPMX19_06971 0.46 -0.3 248,769 + MPMX19_06971 0.87 -0.7 248,769 + MPMX19_06971 0.87 -1.6 248,769 + MPMX19_06971 0.87 +0.2 248,769 + MPMX19_06971 0.87 +1.4 248,769 + MPMX19_06971 0.87 +0.0 248,770 - MPMX19_06971 0.87 +0.3 248,770 - MPMX19_06971 0.87 +0.5 248,770 - MPMX19_06971 0.87 -1.3 248,770 - MPMX19_06971 0.87 -1.6 248,770 - MPMX19_06971 0.87 -0.3 248,770 - MPMX19_06971 0.87 -1.6 249,287 + MPMX19_06972 0.28 -1.4 249,287 + MPMX19_06972 0.28 +1.2 249,341 - MPMX19_06972 0.32 -0.5 249,346 + MPMX19_06972 0.33 +0.8 249,346 + MPMX19_06972 0.33 +0.1 249,346 + MPMX19_06972 0.33 -0.5 249,346 + MPMX19_06972 0.33 -1.3 249,346 + MPMX19_06972 0.33 -0.4 249,347 - MPMX19_06972 0.33 -0.2 249,347 - MPMX19_06972 0.33 -1.0 249,347 - MPMX19_06972 0.33 -0.2 249,347 - MPMX19_06972 0.33 +0.8 249,545 + MPMX19_06972 0.49 -3.0 249,545 + MPMX19_06972 0.49 +0.1 249,546 - MPMX19_06972 0.49 -0.5 249,546 - MPMX19_06972 0.49 +0.0 249,546 - MPMX19_06972 0.49 -1.9 249,546 - MPMX19_06972 0.49 -1.4 249,546 - MPMX19_06972 0.49 -0.6 249,546 - MPMX19_06972 0.49 +1.7 249,779 - MPMX19_06972 0.69 +0.0 250,653 + MPMX19_06973 0.39 -1.5 250,707 + MPMX19_06973 0.43 -1.7 250,707 + MPMX19_06973 0.43 -1.0 250,716 + MPMX19_06973 0.44 +0.8 250,716 + MPMX19_06973 0.44 +0.2 250,716 + MPMX19_06973 0.44 -0.6 250,717 - MPMX19_06973 0.44 -0.9 250,887 + MPMX19_06973 0.58 -1.4 250,888 - MPMX19_06973 0.58 +0.4 250,888 - MPMX19_06973 0.58 +0.5 250,986 + MPMX19_06973 0.67 -0.7 250,986 + MPMX19_06973 0.67 -0.0 250,986 + MPMX19_06973 0.67 -0.7 250,986 + MPMX19_06973 0.67 -2.1 250,986 + MPMX19_06973 0.67 -0.6 250,987 - MPMX19_06973 0.67 -1.0 250,987 - MPMX19_06973 0.67 -1.2 250,987 - MPMX19_06973 0.67 -0.6 250,987 - MPMX19_06973 0.67 +0.5
Or see this region's nucleotide sequence