Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06885 and MPMX19_06886 overlap by 4 nucleotides MPMX19_06886 and MPMX19_06887 are separated by 10 nucleotides MPMX19_06887 and MPMX19_06888 are separated by 2 nucleotides
MPMX19_06885: MPMX19_06885 - Nitrate import ATP-binding protein NrtD, at 157,119 to 157,931
_06885
MPMX19_06886: MPMX19_06886 - Putative aliphatic sulfonates transport permease protein SsuC, at 157,928 to 158,818
_06886
MPMX19_06887: MPMX19_06887 - Adenine deaminase, at 158,829 to 160,508
_06887
MPMX19_06888: MPMX19_06888 - hypothetical protein, at 160,511 to 161,962
_06888
Position (kb) 158
159
160
161 Strain fitness (log2 ratio) -2
-1
0
1 at 157.840 kb on - strand, within MPMX19_06885 at 157.840 kb on - strand, within MPMX19_06885 at 158.374 kb on - strand, within MPMX19_06886 at 158.374 kb on - strand, within MPMX19_06886 at 158.504 kb on + strand, within MPMX19_06886 at 158.504 kb on + strand, within MPMX19_06886 at 158.504 kb on + strand, within MPMX19_06886 at 158.508 kb on + strand, within MPMX19_06886 at 158.508 kb on + strand, within MPMX19_06886 at 158.508 kb on + strand, within MPMX19_06886 at 158.508 kb on + strand, within MPMX19_06886 at 158.508 kb on + strand, within MPMX19_06886 at 158.508 kb on + strand, within MPMX19_06886 at 158.508 kb on + strand, within MPMX19_06886 at 158.508 kb on + strand, within MPMX19_06886 at 158.509 kb on - strand, within MPMX19_06886 at 158.673 kb on - strand, within MPMX19_06886 at 158.673 kb on - strand, within MPMX19_06886 at 158.673 kb on - strand, within MPMX19_06886 at 158.673 kb on - strand, within MPMX19_06886 at 158.673 kb on - strand, within MPMX19_06886 at 159.047 kb on + strand, within MPMX19_06887 at 159.047 kb on + strand, within MPMX19_06887 at 159.047 kb on + strand, within MPMX19_06887 at 159.048 kb on - strand, within MPMX19_06887 at 159.280 kb on - strand, within MPMX19_06887 at 159.280 kb on - strand, within MPMX19_06887 at 159.280 kb on - strand, within MPMX19_06887 at 159.544 kb on - strand, within MPMX19_06887 at 160.019 kb on + strand, within MPMX19_06887 at 160.020 kb on - strand, within MPMX19_06887 at 160.661 kb on + strand, within MPMX19_06888 at 160.661 kb on + strand, within MPMX19_06888 at 160.662 kb on - strand, within MPMX19_06888 at 160.662 kb on - strand, within MPMX19_06888 at 160.856 kb on + strand, within MPMX19_06888
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 157,840 - MPMX19_06885 0.89 -0.6 157,840 - MPMX19_06885 0.89 +1.2 158,374 - MPMX19_06886 0.50 -0.5 158,374 - MPMX19_06886 0.50 -0.7 158,504 + MPMX19_06886 0.65 -1.2 158,504 + MPMX19_06886 0.65 -0.9 158,504 + MPMX19_06886 0.65 -0.8 158,508 + MPMX19_06886 0.65 -0.8 158,508 + MPMX19_06886 0.65 +0.4 158,508 + MPMX19_06886 0.65 -0.5 158,508 + MPMX19_06886 0.65 -1.3 158,508 + MPMX19_06886 0.65 -0.5 158,508 + MPMX19_06886 0.65 +0.5 158,508 + MPMX19_06886 0.65 -1.7 158,508 + MPMX19_06886 0.65 -1.0 158,509 - MPMX19_06886 0.65 -0.6 158,673 - MPMX19_06886 0.84 -1.9 158,673 - MPMX19_06886 0.84 -0.9 158,673 - MPMX19_06886 0.84 -1.9 158,673 - MPMX19_06886 0.84 +0.2 158,673 - MPMX19_06886 0.84 -0.9 159,047 + MPMX19_06887 0.13 -1.2 159,047 + MPMX19_06887 0.13 -2.0 159,047 + MPMX19_06887 0.13 -0.2 159,048 - MPMX19_06887 0.13 -0.0 159,280 - MPMX19_06887 0.27 +0.7 159,280 - MPMX19_06887 0.27 -0.9 159,280 - MPMX19_06887 0.27 -1.8 159,544 - MPMX19_06887 0.43 -0.9 160,019 + MPMX19_06887 0.71 -0.6 160,020 - MPMX19_06887 0.71 -0.0 160,661 + MPMX19_06888 0.10 -2.2 160,661 + MPMX19_06888 0.10 -0.4 160,662 - MPMX19_06888 0.10 +0.1 160,662 - MPMX19_06888 0.10 +0.2 160,856 + MPMX19_06888 0.24 +0.1
Or see this region's nucleotide sequence