Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06513 and MPMX19_06514 are separated by 122 nucleotides MPMX19_06514 and MPMX19_06515 overlap by 4 nucleotides MPMX19_06515 and MPMX19_06516 are separated by 30 nucleotides
MPMX19_06513: MPMX19_06513 - putative N-succinyldiaminopimelate aminotransferase DapC, at 298,581 to 299,747
_06513
MPMX19_06514: MPMX19_06514 - L-methionine gamma-lyase, at 299,870 to 301,123
_06514
MPMX19_06515: MPMX19_06515 - hypothetical protein, at 301,120 to 301,668
_06515
MPMX19_06516: MPMX19_06516 - D-methionine-binding lipoprotein MetQ, at 301,699 to 302,526
_06516
Position (kb)
299
300
301
302 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 298.975 kb on + strand, within MPMX19_06513 at 298.975 kb on + strand, within MPMX19_06513 at 298.975 kb on + strand, within MPMX19_06513 at 298.976 kb on - strand, within MPMX19_06513 at 299.026 kb on + strand, within MPMX19_06513 at 299.026 kb on + strand, within MPMX19_06513 at 299.026 kb on + strand, within MPMX19_06513 at 299.026 kb on + strand, within MPMX19_06513 at 299.026 kb on + strand, within MPMX19_06513 at 299.027 kb on - strand, within MPMX19_06513 at 299.027 kb on - strand, within MPMX19_06513 at 299.110 kb on + strand, within MPMX19_06513 at 299.110 kb on + strand, within MPMX19_06513 at 299.110 kb on + strand, within MPMX19_06513 at 299.111 kb on - strand, within MPMX19_06513 at 299.152 kb on + strand, within MPMX19_06513 at 299.152 kb on + strand, within MPMX19_06513 at 299.152 kb on + strand, within MPMX19_06513 at 299.152 kb on + strand, within MPMX19_06513 at 299.153 kb on - strand, within MPMX19_06513 at 299.153 kb on - strand, within MPMX19_06513 at 299.153 kb on - strand, within MPMX19_06513 at 299.153 kb on - strand, within MPMX19_06513 at 299.221 kb on - strand, within MPMX19_06513 at 299.384 kb on - strand, within MPMX19_06513 at 299.384 kb on - strand, within MPMX19_06513 at 299.392 kb on + strand, within MPMX19_06513 at 299.393 kb on - strand, within MPMX19_06513 at 299.689 kb on - strand at 299.993 kb on + strand at 299.993 kb on + strand at 299.993 kb on + strand at 299.993 kb on + strand at 299.993 kb on + strand at 299.994 kb on - strand at 299.994 kb on - strand at 299.994 kb on - strand at 299.994 kb on - strand at 299.994 kb on - strand at 299.994 kb on - strand at 299.994 kb on - strand at 300.050 kb on + strand, within MPMX19_06514 at 300.050 kb on + strand, within MPMX19_06514 at 300.050 kb on + strand, within MPMX19_06514 at 300.050 kb on + strand, within MPMX19_06514 at 300.051 kb on - strand, within MPMX19_06514 at 300.051 kb on - strand, within MPMX19_06514 at 300.051 kb on - strand, within MPMX19_06514 at 300.051 kb on - strand, within MPMX19_06514 at 300.051 kb on - strand, within MPMX19_06514 at 300.051 kb on - strand, within MPMX19_06514 at 300.051 kb on - strand, within MPMX19_06514 at 300.051 kb on - strand, within MPMX19_06514 at 300.051 kb on - strand, within MPMX19_06514 at 300.051 kb on - strand, within MPMX19_06514 at 300.051 kb on - strand, within MPMX19_06514 at 300.056 kb on + strand, within MPMX19_06514 at 300.056 kb on + strand, within MPMX19_06514 at 300.056 kb on + strand, within MPMX19_06514 at 300.056 kb on + strand, within MPMX19_06514 at 300.056 kb on + strand, within MPMX19_06514 at 300.056 kb on + strand, within MPMX19_06514 at 300.056 kb on + strand, within MPMX19_06514 at 300.056 kb on + strand, within MPMX19_06514 at 300.056 kb on + strand, within MPMX19_06514 at 300.056 kb on + strand, within MPMX19_06514 at 300.057 kb on - strand, within MPMX19_06514 at 300.057 kb on - strand, within MPMX19_06514 at 300.057 kb on - strand, within MPMX19_06514 at 300.057 kb on - strand, within MPMX19_06514 at 300.057 kb on - strand, within MPMX19_06514 at 300.057 kb on - strand, within MPMX19_06514 at 300.057 kb on - strand, within MPMX19_06514 at 300.057 kb on - strand, within MPMX19_06514 at 300.233 kb on + strand, within MPMX19_06514 at 300.233 kb on + strand, within MPMX19_06514 at 300.233 kb on + strand, within MPMX19_06514 at 300.233 kb on + strand, within MPMX19_06514 at 300.234 kb on - strand, within MPMX19_06514 at 300.234 kb on - strand, within MPMX19_06514 at 300.234 kb on - strand, within MPMX19_06514 at 300.602 kb on + strand, within MPMX19_06514 at 300.603 kb on - strand, within MPMX19_06514 at 300.603 kb on - strand, within MPMX19_06514 at 300.956 kb on + strand, within MPMX19_06514 at 300.956 kb on + strand, within MPMX19_06514 at 300.956 kb on + strand, within MPMX19_06514 at 300.957 kb on - strand, within MPMX19_06514 at 300.957 kb on - strand, within MPMX19_06514 at 300.957 kb on - strand, within MPMX19_06514 at 301.138 kb on + strand at 301.138 kb on + strand at 301.139 kb on - strand at 301.139 kb on - strand at 301.139 kb on - strand at 301.139 kb on - strand at 301.139 kb on - strand at 301.139 kb on - strand at 301.313 kb on - strand, within MPMX19_06515 at 301.479 kb on + strand, within MPMX19_06515 at 301.479 kb on + strand, within MPMX19_06515 at 301.479 kb on + strand, within MPMX19_06515 at 301.480 kb on - strand, within MPMX19_06515 at 301.489 kb on + strand, within MPMX19_06515 at 301.489 kb on + strand, within MPMX19_06515 at 301.508 kb on - strand, within MPMX19_06515 at 301.508 kb on - strand, within MPMX19_06515 at 301.508 kb on - strand, within MPMX19_06515 at 301.508 kb on - strand, within MPMX19_06515 at 301.508 kb on - strand, within MPMX19_06515 at 301.508 kb on - strand, within MPMX19_06515 at 301.508 kb on - strand, within MPMX19_06515 at 301.715 kb on + strand at 301.715 kb on + strand at 301.716 kb on - strand at 301.968 kb on + strand, within MPMX19_06516 at 301.968 kb on + strand, within MPMX19_06516 at 301.969 kb on - strand, within MPMX19_06516 at 301.969 kb on - strand, within MPMX19_06516 at 302.005 kb on + strand, within MPMX19_06516 at 302.006 kb on - strand, within MPMX19_06516 at 302.006 kb on - strand, within MPMX19_06516 at 302.032 kb on + strand, within MPMX19_06516 at 302.032 kb on + strand, within MPMX19_06516 at 302.032 kb on + strand, within MPMX19_06516 at 302.032 kb on + strand, within MPMX19_06516 at 302.032 kb on + strand, within MPMX19_06516 at 302.032 kb on + strand, within MPMX19_06516 at 302.032 kb on + strand, within MPMX19_06516 at 302.032 kb on + strand, within MPMX19_06516 at 302.032 kb on + strand, within MPMX19_06516 at 302.032 kb on + strand, within MPMX19_06516 at 302.032 kb on + strand, within MPMX19_06516 at 302.032 kb on + strand, within MPMX19_06516 at 302.033 kb on - strand, within MPMX19_06516 at 302.033 kb on - strand, within MPMX19_06516 at 302.033 kb on - strand, within MPMX19_06516 at 302.033 kb on - strand, within MPMX19_06516 at 302.033 kb on - strand, within MPMX19_06516 at 302.033 kb on - strand, within MPMX19_06516 at 302.033 kb on - strand, within MPMX19_06516 at 302.033 kb on - strand, within MPMX19_06516 at 302.033 kb on - strand, within MPMX19_06516 at 302.033 kb on - strand, within MPMX19_06516 at 302.033 kb on - strand, within MPMX19_06516 at 302.033 kb on - strand, within MPMX19_06516 at 302.033 kb on - strand, within MPMX19_06516 at 302.033 kb on - strand, within MPMX19_06516 at 302.033 kb on - strand, within MPMX19_06516 at 302.033 kb on - strand, within MPMX19_06516 at 302.053 kb on + strand, within MPMX19_06516 at 302.053 kb on + strand, within MPMX19_06516 at 302.054 kb on - strand, within MPMX19_06516 at 302.054 kb on - strand, within MPMX19_06516 at 302.065 kb on + strand, within MPMX19_06516 at 302.065 kb on + strand, within MPMX19_06516 at 302.065 kb on + strand, within MPMX19_06516 at 302.065 kb on + strand, within MPMX19_06516 at 302.065 kb on + strand, within MPMX19_06516 at 302.065 kb on + strand, within MPMX19_06516 at 302.065 kb on + strand, within MPMX19_06516 at 302.065 kb on + strand, within MPMX19_06516 at 302.065 kb on + strand, within MPMX19_06516 at 302.065 kb on + strand, within MPMX19_06516 at 302.065 kb on + strand, within MPMX19_06516 at 302.065 kb on + strand, within MPMX19_06516 at 302.065 kb on + strand, within MPMX19_06516 at 302.066 kb on - strand, within MPMX19_06516 at 302.066 kb on - strand, within MPMX19_06516 at 302.066 kb on - strand, within MPMX19_06516 at 302.066 kb on - strand, within MPMX19_06516 at 302.066 kb on - strand, within MPMX19_06516 at 302.066 kb on - strand, within MPMX19_06516 at 302.066 kb on - strand, within MPMX19_06516 at 302.066 kb on - strand, within MPMX19_06516 at 302.066 kb on - strand, within MPMX19_06516 at 302.066 kb on - strand, within MPMX19_06516 at 302.066 kb on - strand, within MPMX19_06516 at 302.066 kb on - strand, within MPMX19_06516 at 302.066 kb on - strand, within MPMX19_06516 at 302.066 kb on - strand, within MPMX19_06516
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 298,975 + MPMX19_06513 0.34 +0.9 298,975 + MPMX19_06513 0.34 -0.8 298,975 + MPMX19_06513 0.34 -0.7 298,976 - MPMX19_06513 0.34 -1.0 299,026 + MPMX19_06513 0.38 -1.7 299,026 + MPMX19_06513 0.38 -1.1 299,026 + MPMX19_06513 0.38 -2.2 299,026 + MPMX19_06513 0.38 -0.7 299,026 + MPMX19_06513 0.38 -1.2 299,027 - MPMX19_06513 0.38 -0.5 299,027 - MPMX19_06513 0.38 -1.4 299,110 + MPMX19_06513 0.45 -0.3 299,110 + MPMX19_06513 0.45 -0.5 299,110 + MPMX19_06513 0.45 -1.2 299,111 - MPMX19_06513 0.45 +1.2 299,152 + MPMX19_06513 0.49 -0.8 299,152 + MPMX19_06513 0.49 -1.0 299,152 + MPMX19_06513 0.49 +0.5 299,152 + MPMX19_06513 0.49 +1.9 299,153 - MPMX19_06513 0.49 -1.0 299,153 - MPMX19_06513 0.49 -1.5 299,153 - MPMX19_06513 0.49 -0.4 299,153 - MPMX19_06513 0.49 -0.2 299,221 - MPMX19_06513 0.55 -0.8 299,384 - MPMX19_06513 0.69 -0.6 299,384 - MPMX19_06513 0.69 +0.2 299,392 + MPMX19_06513 0.69 +1.0 299,393 - MPMX19_06513 0.70 -1.2 299,689 - -0.2 299,993 + -0.1 299,993 + +0.5 299,993 + -1.6 299,993 + -0.0 299,993 + +0.2 299,994 - -2.5 299,994 - -0.1 299,994 - -0.2 299,994 - -0.8 299,994 - -1.2 299,994 - +0.5 299,994 - -1.5 300,050 + MPMX19_06514 0.14 -0.2 300,050 + MPMX19_06514 0.14 -0.1 300,050 + MPMX19_06514 0.14 -1.2 300,050 + MPMX19_06514 0.14 -0.2 300,051 - MPMX19_06514 0.14 -1.1 300,051 - MPMX19_06514 0.14 +0.7 300,051 - MPMX19_06514 0.14 -0.3 300,051 - MPMX19_06514 0.14 +0.2 300,051 - MPMX19_06514 0.14 -0.7 300,051 - MPMX19_06514 0.14 +0.7 300,051 - MPMX19_06514 0.14 -1.4 300,051 - MPMX19_06514 0.14 -0.5 300,051 - MPMX19_06514 0.14 +1.3 300,051 - MPMX19_06514 0.14 -0.6 300,051 - MPMX19_06514 0.14 -0.1 300,056 + MPMX19_06514 0.15 -0.7 300,056 + MPMX19_06514 0.15 -1.3 300,056 + MPMX19_06514 0.15 -0.4 300,056 + MPMX19_06514 0.15 +0.5 300,056 + MPMX19_06514 0.15 +0.9 300,056 + MPMX19_06514 0.15 -1.0 300,056 + MPMX19_06514 0.15 -0.7 300,056 + MPMX19_06514 0.15 +0.3 300,056 + MPMX19_06514 0.15 +0.5 300,056 + MPMX19_06514 0.15 -0.1 300,057 - MPMX19_06514 0.15 -0.2 300,057 - MPMX19_06514 0.15 +2.1 300,057 - MPMX19_06514 0.15 -0.4 300,057 - MPMX19_06514 0.15 -0.5 300,057 - MPMX19_06514 0.15 +0.9 300,057 - MPMX19_06514 0.15 +2.5 300,057 - MPMX19_06514 0.15 +0.2 300,057 - MPMX19_06514 0.15 -0.9 300,233 + MPMX19_06514 0.29 +0.3 300,233 + MPMX19_06514 0.29 -1.3 300,233 + MPMX19_06514 0.29 -0.6 300,233 + MPMX19_06514 0.29 +0.3 300,234 - MPMX19_06514 0.29 +0.2 300,234 - MPMX19_06514 0.29 -1.1 300,234 - MPMX19_06514 0.29 -0.5 300,602 + MPMX19_06514 0.58 -0.6 300,603 - MPMX19_06514 0.58 +0.0 300,603 - MPMX19_06514 0.58 -0.8 300,956 + MPMX19_06514 0.87 +0.3 300,956 + MPMX19_06514 0.87 +0.4 300,956 + MPMX19_06514 0.87 -1.4 300,957 - MPMX19_06514 0.87 -0.2 300,957 - MPMX19_06514 0.87 +2.1 300,957 - MPMX19_06514 0.87 +0.1 301,138 + +0.5 301,138 + -2.0 301,139 - +0.9 301,139 - -2.0 301,139 - +0.4 301,139 - +1.2 301,139 - -1.2 301,139 - -1.2 301,313 - MPMX19_06515 0.35 +0.0 301,479 + MPMX19_06515 0.65 -1.8 301,479 + MPMX19_06515 0.65 -1.0 301,479 + MPMX19_06515 0.65 +0.5 301,480 - MPMX19_06515 0.66 -0.5 301,489 + MPMX19_06515 0.67 +0.9 301,489 + MPMX19_06515 0.67 -0.3 301,508 - MPMX19_06515 0.71 -0.3 301,508 - MPMX19_06515 0.71 -1.0 301,508 - MPMX19_06515 0.71 +3.5 301,508 - MPMX19_06515 0.71 +0.0 301,508 - MPMX19_06515 0.71 -1.8 301,508 - MPMX19_06515 0.71 -0.2 301,508 - MPMX19_06515 0.71 -1.6 301,715 + -1.0 301,715 + +1.5 301,716 - +0.2 301,968 + MPMX19_06516 0.32 +0.4 301,968 + MPMX19_06516 0.32 -0.7 301,969 - MPMX19_06516 0.33 -0.3 301,969 - MPMX19_06516 0.33 -2.1 302,005 + MPMX19_06516 0.37 -0.1 302,006 - MPMX19_06516 0.37 -1.9 302,006 - MPMX19_06516 0.37 -0.5 302,032 + MPMX19_06516 0.40 -1.3 302,032 + MPMX19_06516 0.40 -1.0 302,032 + MPMX19_06516 0.40 +1.5 302,032 + MPMX19_06516 0.40 -0.5 302,032 + MPMX19_06516 0.40 +1.7 302,032 + MPMX19_06516 0.40 -1.1 302,032 + MPMX19_06516 0.40 -1.1 302,032 + MPMX19_06516 0.40 +0.3 302,032 + MPMX19_06516 0.40 -1.3 302,032 + MPMX19_06516 0.40 -2.1 302,032 + MPMX19_06516 0.40 +1.5 302,032 + MPMX19_06516 0.40 +0.2 302,033 - MPMX19_06516 0.40 -1.1 302,033 - MPMX19_06516 0.40 -0.3 302,033 - MPMX19_06516 0.40 -0.3 302,033 - MPMX19_06516 0.40 -0.8 302,033 - MPMX19_06516 0.40 +0.2 302,033 - MPMX19_06516 0.40 +0.2 302,033 - MPMX19_06516 0.40 -0.1 302,033 - MPMX19_06516 0.40 -0.9 302,033 - MPMX19_06516 0.40 -0.6 302,033 - MPMX19_06516 0.40 -1.0 302,033 - MPMX19_06516 0.40 -0.3 302,033 - MPMX19_06516 0.40 +1.2 302,033 - MPMX19_06516 0.40 -0.3 302,033 - MPMX19_06516 0.40 -0.9 302,033 - MPMX19_06516 0.40 -1.0 302,033 - MPMX19_06516 0.40 +1.3 302,053 + MPMX19_06516 0.43 -0.2 302,053 + MPMX19_06516 0.43 -0.0 302,054 - MPMX19_06516 0.43 -1.0 302,054 - MPMX19_06516 0.43 -0.3 302,065 + MPMX19_06516 0.44 -0.1 302,065 + MPMX19_06516 0.44 -0.1 302,065 + MPMX19_06516 0.44 +0.7 302,065 + MPMX19_06516 0.44 -1.1 302,065 + MPMX19_06516 0.44 -0.4 302,065 + MPMX19_06516 0.44 -0.6 302,065 + MPMX19_06516 0.44 -0.7 302,065 + MPMX19_06516 0.44 +0.4 302,065 + MPMX19_06516 0.44 +0.9 302,065 + MPMX19_06516 0.44 -0.5 302,065 + MPMX19_06516 0.44 +0.0 302,065 + MPMX19_06516 0.44 -0.3 302,065 + MPMX19_06516 0.44 -0.3 302,066 - MPMX19_06516 0.44 -0.8 302,066 - MPMX19_06516 0.44 -1.0 302,066 - MPMX19_06516 0.44 -0.1 302,066 - MPMX19_06516 0.44 -1.4 302,066 - MPMX19_06516 0.44 +0.1 302,066 - MPMX19_06516 0.44 -0.0 302,066 - MPMX19_06516 0.44 +0.9 302,066 - MPMX19_06516 0.44 +1.2 302,066 - MPMX19_06516 0.44 -0.7 302,066 - MPMX19_06516 0.44 -1.0 302,066 - MPMX19_06516 0.44 -0.9 302,066 - MPMX19_06516 0.44 -1.0 302,066 - MPMX19_06516 0.44 -1.2 302,066 - MPMX19_06516 0.44 -1.0
Or see this region's nucleotide sequence