Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06464 and MPMX19_06465 are separated by 0 nucleotides MPMX19_06465 and MPMX19_06466 overlap by 4 nucleotides MPMX19_06466 and MPMX19_06467 are separated by 4 nucleotides
MPMX19_06464: MPMX19_06464 - Tryptophan synthase beta chain, at 247,576 to 248,856
_06464
MPMX19_06465: MPMX19_06465 - hypothetical protein, at 248,857 to 249,768
_06465
MPMX19_06466: MPMX19_06466 - Vitamin B12 import ATP-binding protein BtuD, at 249,765 to 250,601
_06466
MPMX19_06467: MPMX19_06467 - hypothetical protein, at 250,606 to 251,637
_06467
Position (kb)
249
250
251 Strain fitness (log2 ratio)
-2
-1
0
1 at 248.859 kb on - strand at 248.859 kb on - strand at 248.886 kb on + strand at 248.975 kb on + strand, within MPMX19_06465 at 248.975 kb on + strand, within MPMX19_06465 at 248.975 kb on + strand, within MPMX19_06465 at 249.143 kb on + strand, within MPMX19_06465 at 249.144 kb on - strand, within MPMX19_06465 at 249.144 kb on - strand, within MPMX19_06465 at 249.144 kb on - strand, within MPMX19_06465 at 249.144 kb on - strand, within MPMX19_06465 at 249.144 kb on - strand, within MPMX19_06465 at 249.164 kb on + strand, within MPMX19_06465 at 249.165 kb on - strand, within MPMX19_06465 at 249.165 kb on - strand, within MPMX19_06465 at 249.165 kb on - strand, within MPMX19_06465 at 249.428 kb on + strand, within MPMX19_06465 at 249.429 kb on - strand, within MPMX19_06465 at 249.429 kb on - strand, within MPMX19_06465 at 249.477 kb on + strand, within MPMX19_06465 at 249.695 kb on + strand at 249.696 kb on - strand at 249.696 kb on - strand at 249.927 kb on + strand, within MPMX19_06466 at 249.927 kb on + strand, within MPMX19_06466 at 249.927 kb on + strand, within MPMX19_06466 at 249.928 kb on - strand, within MPMX19_06466 at 249.928 kb on - strand, within MPMX19_06466 at 249.928 kb on - strand, within MPMX19_06466 at 249.928 kb on - strand, within MPMX19_06466 at 249.928 kb on - strand, within MPMX19_06466 at 249.928 kb on - strand, within MPMX19_06466 at 250.405 kb on - strand, within MPMX19_06466 at 250.444 kb on + strand, within MPMX19_06466 at 250.444 kb on + strand, within MPMX19_06466 at 250.444 kb on + strand, within MPMX19_06466 at 250.444 kb on + strand, within MPMX19_06466 at 250.444 kb on + strand, within MPMX19_06466 at 250.481 kb on - strand, within MPMX19_06466 at 250.481 kb on - strand, within MPMX19_06466 at 250.481 kb on - strand, within MPMX19_06466 at 250.481 kb on - strand, within MPMX19_06466 at 250.481 kb on - strand, within MPMX19_06466 at 250.481 kb on - strand, within MPMX19_06466 at 250.481 kb on - strand, within MPMX19_06466 at 250.481 kb on - strand, within MPMX19_06466 at 250.481 kb on - strand, within MPMX19_06466 at 250.513 kb on + strand, within MPMX19_06466 at 250.513 kb on + strand, within MPMX19_06466 at 250.513 kb on + strand, within MPMX19_06466 at 250.513 kb on + strand, within MPMX19_06466 at 250.513 kb on + strand, within MPMX19_06466 at 250.513 kb on + strand, within MPMX19_06466 at 250.513 kb on + strand, within MPMX19_06466 at 250.513 kb on + strand, within MPMX19_06466 at 250.513 kb on + strand, within MPMX19_06466 at 250.513 kb on + strand, within MPMX19_06466 at 250.513 kb on + strand, within MPMX19_06466 at 250.585 kb on + strand at 250.585 kb on + strand at 250.585 kb on + strand at 250.585 kb on + strand at 250.586 kb on - strand at 250.586 kb on - strand at 250.643 kb on + strand at 250.643 kb on + strand at 250.644 kb on - strand at 250.805 kb on + strand, within MPMX19_06467 at 250.805 kb on + strand, within MPMX19_06467 at 250.881 kb on - strand, within MPMX19_06467 at 250.881 kb on - strand, within MPMX19_06467 at 250.881 kb on - strand, within MPMX19_06467 at 250.881 kb on - strand, within MPMX19_06467 at 250.881 kb on - strand, within MPMX19_06467 at 250.958 kb on + strand, within MPMX19_06467 at 251.004 kb on - strand, within MPMX19_06467 at 251.114 kb on + strand, within MPMX19_06467 at 251.114 kb on + strand, within MPMX19_06467 at 251.115 kb on - strand, within MPMX19_06467 at 251.495 kb on + strand, within MPMX19_06467 at 251.495 kb on + strand, within MPMX19_06467 at 251.507 kb on + strand, within MPMX19_06467 at 251.507 kb on + strand, within MPMX19_06467 at 251.507 kb on + strand, within MPMX19_06467 at 251.507 kb on + strand, within MPMX19_06467 at 251.508 kb on - strand, within MPMX19_06467
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 248,859 - -0.3 248,859 - -0.3 248,886 + -0.8 248,975 + MPMX19_06465 0.13 +0.2 248,975 + MPMX19_06465 0.13 +0.4 248,975 + MPMX19_06465 0.13 +0.9 249,143 + MPMX19_06465 0.31 +0.7 249,144 - MPMX19_06465 0.31 -0.8 249,144 - MPMX19_06465 0.31 -2.2 249,144 - MPMX19_06465 0.31 -0.9 249,144 - MPMX19_06465 0.31 -0.8 249,144 - MPMX19_06465 0.31 -0.7 249,164 + MPMX19_06465 0.34 -2.0 249,165 - MPMX19_06465 0.34 -1.7 249,165 - MPMX19_06465 0.34 -1.2 249,165 - MPMX19_06465 0.34 +1.3 249,428 + MPMX19_06465 0.63 -1.6 249,429 - MPMX19_06465 0.63 -1.5 249,429 - MPMX19_06465 0.63 -0.7 249,477 + MPMX19_06465 0.68 +0.2 249,695 + +0.1 249,696 - -0.8 249,696 - -0.3 249,927 + MPMX19_06466 0.19 -0.1 249,927 + MPMX19_06466 0.19 +0.3 249,927 + MPMX19_06466 0.19 +0.5 249,928 - MPMX19_06466 0.19 +0.6 249,928 - MPMX19_06466 0.19 +0.3 249,928 - MPMX19_06466 0.19 -1.6 249,928 - MPMX19_06466 0.19 -0.4 249,928 - MPMX19_06466 0.19 -0.7 249,928 - MPMX19_06466 0.19 +0.7 250,405 - MPMX19_06466 0.76 +0.4 250,444 + MPMX19_06466 0.81 +0.9 250,444 + MPMX19_06466 0.81 -0.3 250,444 + MPMX19_06466 0.81 -0.1 250,444 + MPMX19_06466 0.81 -0.0 250,444 + MPMX19_06466 0.81 -0.7 250,481 - MPMX19_06466 0.86 -1.0 250,481 - MPMX19_06466 0.86 +0.5 250,481 - MPMX19_06466 0.86 -0.4 250,481 - MPMX19_06466 0.86 +0.3 250,481 - MPMX19_06466 0.86 -0.9 250,481 - MPMX19_06466 0.86 +0.5 250,481 - MPMX19_06466 0.86 -1.9 250,481 - MPMX19_06466 0.86 -0.4 250,481 - MPMX19_06466 0.86 +0.3 250,513 + MPMX19_06466 0.89 -0.5 250,513 + MPMX19_06466 0.89 -0.3 250,513 + MPMX19_06466 0.89 -1.2 250,513 + MPMX19_06466 0.89 -0.6 250,513 + MPMX19_06466 0.89 -0.1 250,513 + MPMX19_06466 0.89 +0.5 250,513 + MPMX19_06466 0.89 -0.6 250,513 + MPMX19_06466 0.89 +0.2 250,513 + MPMX19_06466 0.89 +0.1 250,513 + MPMX19_06466 0.89 -1.1 250,513 + MPMX19_06466 0.89 -1.1 250,585 + -0.8 250,585 + -1.0 250,585 + +1.0 250,585 + +0.5 250,586 - -0.1 250,586 - -0.0 250,643 + -1.0 250,643 + -1.9 250,644 - -0.5 250,805 + MPMX19_06467 0.19 +0.3 250,805 + MPMX19_06467 0.19 -1.7 250,881 - MPMX19_06467 0.27 +0.5 250,881 - MPMX19_06467 0.27 -1.3 250,881 - MPMX19_06467 0.27 -0.8 250,881 - MPMX19_06467 0.27 +1.5 250,881 - MPMX19_06467 0.27 -0.8 250,958 + MPMX19_06467 0.34 -1.4 251,004 - MPMX19_06467 0.39 -1.4 251,114 + MPMX19_06467 0.49 -0.1 251,114 + MPMX19_06467 0.49 +1.5 251,115 - MPMX19_06467 0.49 -1.1 251,495 + MPMX19_06467 0.86 +1.2 251,495 + MPMX19_06467 0.86 -0.3 251,507 + MPMX19_06467 0.87 -1.5 251,507 + MPMX19_06467 0.87 +0.2 251,507 + MPMX19_06467 0.87 -0.7 251,507 + MPMX19_06467 0.87 +0.3 251,508 - MPMX19_06467 0.87 +0.5
Or see this region's nucleotide sequence