Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06451 and MPMX19_06452 are separated by 91 nucleotides MPMX19_06452 and MPMX19_06453 overlap by 4 nucleotides MPMX19_06453 and MPMX19_06454 overlap by 8 nucleotides
MPMX19_06451: MPMX19_06451 - hypothetical protein, at 225,187 to 226,161
_06451
MPMX19_06452: MPMX19_06452 - hypothetical protein, at 226,253 to 227,740
_06452
MPMX19_06453: MPMX19_06453 - hypothetical protein, at 227,737 to 228,612
_06453
MPMX19_06454: MPMX19_06454 - hypothetical protein, at 228,605 to 230,290
_06454
Position (kb) 226
227
228 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 225.358 kb on + strand, within MPMX19_06451 at 225.359 kb on - strand, within MPMX19_06451 at 225.359 kb on - strand, within MPMX19_06451 at 225.359 kb on - strand, within MPMX19_06451 at 225.390 kb on + strand, within MPMX19_06451 at 225.391 kb on - strand, within MPMX19_06451 at 225.391 kb on - strand, within MPMX19_06451 at 225.403 kb on + strand, within MPMX19_06451 at 225.403 kb on + strand, within MPMX19_06451 at 225.403 kb on + strand, within MPMX19_06451 at 225.403 kb on + strand, within MPMX19_06451 at 225.403 kb on + strand, within MPMX19_06451 at 225.403 kb on + strand, within MPMX19_06451 at 225.404 kb on - strand, within MPMX19_06451 at 225.408 kb on + strand, within MPMX19_06451 at 225.408 kb on + strand, within MPMX19_06451 at 225.408 kb on + strand, within MPMX19_06451 at 225.409 kb on - strand, within MPMX19_06451 at 225.409 kb on - strand, within MPMX19_06451 at 225.482 kb on + strand, within MPMX19_06451 at 225.483 kb on - strand, within MPMX19_06451 at 225.487 kb on + strand, within MPMX19_06451 at 225.487 kb on + strand, within MPMX19_06451 at 225.487 kb on + strand, within MPMX19_06451 at 225.487 kb on + strand, within MPMX19_06451 at 225.488 kb on - strand, within MPMX19_06451 at 225.488 kb on - strand, within MPMX19_06451 at 225.488 kb on - strand, within MPMX19_06451 at 225.488 kb on - strand, within MPMX19_06451 at 225.488 kb on - strand, within MPMX19_06451 at 225.496 kb on + strand, within MPMX19_06451 at 225.496 kb on + strand, within MPMX19_06451 at 225.496 kb on + strand, within MPMX19_06451 at 225.496 kb on + strand, within MPMX19_06451 at 225.496 kb on + strand, within MPMX19_06451 at 225.497 kb on - strand, within MPMX19_06451 at 225.497 kb on - strand, within MPMX19_06451 at 225.497 kb on - strand, within MPMX19_06451 at 225.497 kb on - strand, within MPMX19_06451 at 225.529 kb on - strand, within MPMX19_06451 at 225.586 kb on - strand, within MPMX19_06451 at 225.610 kb on + strand, within MPMX19_06451 at 225.610 kb on + strand, within MPMX19_06451 at 225.640 kb on + strand, within MPMX19_06451 at 225.641 kb on - strand, within MPMX19_06451 at 225.667 kb on + strand, within MPMX19_06451 at 225.667 kb on + strand, within MPMX19_06451 at 225.667 kb on + strand, within MPMX19_06451 at 225.667 kb on + strand, within MPMX19_06451 at 225.668 kb on - strand, within MPMX19_06451 at 225.668 kb on - strand, within MPMX19_06451 at 225.668 kb on - strand, within MPMX19_06451 at 225.688 kb on + strand, within MPMX19_06451 at 225.688 kb on + strand, within MPMX19_06451 at 225.688 kb on + strand, within MPMX19_06451 at 225.790 kb on + strand, within MPMX19_06451 at 225.790 kb on + strand, within MPMX19_06451 at 225.790 kb on + strand, within MPMX19_06451 at 225.790 kb on + strand, within MPMX19_06451 at 225.791 kb on - strand, within MPMX19_06451 at 225.875 kb on + strand, within MPMX19_06451 at 225.876 kb on - strand, within MPMX19_06451 at 225.876 kb on - strand, within MPMX19_06451 at 225.904 kb on + strand, within MPMX19_06451 at 225.904 kb on + strand, within MPMX19_06451 at 225.904 kb on + strand, within MPMX19_06451 at 225.904 kb on + strand, within MPMX19_06451 at 225.904 kb on + strand, within MPMX19_06451 at 225.905 kb on - strand, within MPMX19_06451 at 225.905 kb on - strand, within MPMX19_06451 at 225.905 kb on - strand, within MPMX19_06451 at 225.905 kb on - strand, within MPMX19_06451 at 225.905 kb on - strand, within MPMX19_06451 at 225.905 kb on - strand, within MPMX19_06451 at 225.905 kb on - strand, within MPMX19_06451 at 225.905 kb on - strand, within MPMX19_06451 at 225.906 kb on + strand, within MPMX19_06451 at 225.906 kb on + strand, within MPMX19_06451 at 225.907 kb on - strand, within MPMX19_06451 at 225.907 kb on - strand, within MPMX19_06451 at 225.907 kb on - strand, within MPMX19_06451 at 226.110 kb on - strand at 226.137 kb on + strand at 226.137 kb on + strand at 226.137 kb on + strand at 226.137 kb on + strand at 226.138 kb on - strand at 226.138 kb on - strand at 226.159 kb on + strand at 226.159 kb on + strand at 226.160 kb on - strand at 226.216 kb on - strand at 226.216 kb on - strand at 226.216 kb on - strand at 226.234 kb on - strand at 226.242 kb on - strand at 226.242 kb on - strand at 226.376 kb on + strand at 226.394 kb on + strand at 226.395 kb on - strand at 226.395 kb on - strand at 226.395 kb on - strand at 226.599 kb on + strand, within MPMX19_06452 at 226.599 kb on + strand, within MPMX19_06452 at 226.600 kb on - strand, within MPMX19_06452 at 226.600 kb on - strand, within MPMX19_06452 at 226.600 kb on - strand, within MPMX19_06452 at 226.600 kb on - strand, within MPMX19_06452 at 226.632 kb on + strand, within MPMX19_06452 at 226.632 kb on + strand, within MPMX19_06452 at 226.633 kb on - strand, within MPMX19_06452 at 226.667 kb on + strand, within MPMX19_06452 at 226.668 kb on - strand, within MPMX19_06452 at 226.774 kb on + strand, within MPMX19_06452 at 226.774 kb on + strand, within MPMX19_06452 at 226.775 kb on - strand, within MPMX19_06452 at 226.775 kb on - strand, within MPMX19_06452 at 226.820 kb on + strand, within MPMX19_06452 at 226.820 kb on + strand, within MPMX19_06452 at 226.821 kb on - strand, within MPMX19_06452 at 226.821 kb on - strand, within MPMX19_06452 at 226.821 kb on - strand, within MPMX19_06452 at 226.821 kb on - strand, within MPMX19_06452 at 226.821 kb on - strand, within MPMX19_06452 at 226.821 kb on - strand, within MPMX19_06452 at 227.000 kb on + strand, within MPMX19_06452 at 227.000 kb on + strand, within MPMX19_06452 at 227.000 kb on + strand, within MPMX19_06452 at 227.001 kb on - strand, within MPMX19_06452 at 227.001 kb on - strand, within MPMX19_06452 at 227.142 kb on + strand, within MPMX19_06452 at 227.142 kb on + strand, within MPMX19_06452 at 227.143 kb on - strand, within MPMX19_06452 at 227.269 kb on + strand, within MPMX19_06452 at 227.403 kb on + strand, within MPMX19_06452 at 227.403 kb on + strand, within MPMX19_06452 at 227.404 kb on - strand, within MPMX19_06452 at 227.404 kb on - strand, within MPMX19_06452 at 227.404 kb on - strand, within MPMX19_06452 at 227.404 kb on - strand, within MPMX19_06452 at 227.404 kb on - strand, within MPMX19_06452 at 227.404 kb on - strand, within MPMX19_06452 at 227.404 kb on - strand, within MPMX19_06452 at 227.613 kb on + strand at 227.613 kb on + strand at 227.613 kb on + strand at 227.613 kb on + strand at 227.613 kb on + strand at 227.613 kb on + strand at 227.613 kb on + strand at 227.613 kb on + strand at 227.613 kb on + strand at 227.613 kb on + strand at 227.613 kb on + strand at 227.614 kb on - strand at 227.614 kb on - strand at 227.614 kb on - strand at 227.614 kb on - strand at 227.614 kb on - strand at 227.614 kb on - strand at 227.614 kb on - strand at 227.614 kb on - strand at 227.614 kb on - strand at 227.614 kb on - strand at 227.614 kb on - strand at 227.614 kb on - strand at 227.614 kb on - strand at 227.634 kb on + strand at 227.634 kb on + strand at 227.635 kb on - strand at 227.635 kb on - strand at 227.635 kb on - strand at 227.635 kb on - strand at 227.707 kb on + strand at 227.707 kb on + strand at 227.707 kb on + strand at 227.707 kb on + strand at 227.708 kb on - strand at 227.708 kb on - strand at 227.708 kb on - strand at 227.708 kb on - strand at 227.708 kb on - strand at 227.708 kb on - strand at 227.708 kb on - strand at 227.728 kb on + strand at 227.728 kb on + strand at 227.728 kb on + strand at 227.728 kb on + strand at 227.729 kb on - strand at 227.729 kb on - strand at 227.729 kb on - strand at 227.729 kb on - strand at 227.729 kb on - strand at 227.762 kb on + strand at 227.762 kb on + strand at 227.762 kb on + strand at 227.762 kb on + strand at 227.762 kb on + strand at 227.762 kb on + strand at 227.762 kb on + strand at 227.762 kb on + strand at 227.762 kb on + strand at 227.762 kb on + strand at 227.763 kb on - strand at 227.763 kb on - strand at 227.763 kb on - strand at 227.763 kb on - strand at 227.763 kb on - strand at 227.763 kb on - strand at 228.009 kb on + strand, within MPMX19_06453 at 228.009 kb on + strand, within MPMX19_06453 at 228.010 kb on - strand, within MPMX19_06453 at 228.278 kb on + strand, within MPMX19_06453 at 228.278 kb on + strand, within MPMX19_06453 at 228.278 kb on + strand, within MPMX19_06453 at 228.278 kb on + strand, within MPMX19_06453 at 228.278 kb on + strand, within MPMX19_06453 at 228.278 kb on + strand, within MPMX19_06453 at 228.278 kb on + strand, within MPMX19_06453 at 228.278 kb on + strand, within MPMX19_06453 at 228.279 kb on - strand, within MPMX19_06453 at 228.279 kb on - strand, within MPMX19_06453 at 228.279 kb on - strand, within MPMX19_06453 at 228.279 kb on - strand, within MPMX19_06453 at 228.279 kb on - strand, within MPMX19_06453 at 228.279 kb on - strand, within MPMX19_06453 at 228.279 kb on - strand, within MPMX19_06453 at 228.279 kb on - strand, within MPMX19_06453 at 228.507 kb on - strand, within MPMX19_06453 at 228.596 kb on + strand at 228.597 kb on - strand at 228.597 kb on - strand at 228.617 kb on + strand at 228.617 kb on + strand at 228.617 kb on + strand at 228.618 kb on - strand at 228.618 kb on - strand at 228.618 kb on - strand at 228.618 kb on - strand at 228.618 kb on - strand at 228.618 kb on - strand at 228.630 kb on + strand at 228.630 kb on + strand at 228.630 kb on + strand at 228.630 kb on + strand at 228.631 kb on - strand at 228.631 kb on - strand at 228.652 kb on + strand at 228.653 kb on - strand at 228.653 kb on - strand at 228.667 kb on + strand at 228.684 kb on + strand at 228.684 kb on + strand at 228.684 kb on + strand at 228.684 kb on + strand at 228.685 kb on - strand at 228.685 kb on - strand at 228.685 kb on - strand at 228.685 kb on - strand at 228.685 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 225,358 + MPMX19_06451 0.18 -0.7 225,359 - MPMX19_06451 0.18 -0.7 225,359 - MPMX19_06451 0.18 -0.2 225,359 - MPMX19_06451 0.18 -0.6 225,390 + MPMX19_06451 0.21 -2.3 225,391 - MPMX19_06451 0.21 -0.1 225,391 - MPMX19_06451 0.21 -1.4 225,403 + MPMX19_06451 0.22 -0.5 225,403 + MPMX19_06451 0.22 +0.2 225,403 + MPMX19_06451 0.22 +0.4 225,403 + MPMX19_06451 0.22 +0.1 225,403 + MPMX19_06451 0.22 -1.9 225,403 + MPMX19_06451 0.22 -0.3 225,404 - MPMX19_06451 0.22 -0.2 225,408 + MPMX19_06451 0.23 -1.6 225,408 + MPMX19_06451 0.23 +1.5 225,408 + MPMX19_06451 0.23 +1.4 225,409 - MPMX19_06451 0.23 +0.4 225,409 - MPMX19_06451 0.23 -2.2 225,482 + MPMX19_06451 0.30 +1.0 225,483 - MPMX19_06451 0.30 -1.3 225,487 + MPMX19_06451 0.31 -0.7 225,487 + MPMX19_06451 0.31 -1.6 225,487 + MPMX19_06451 0.31 -0.5 225,487 + MPMX19_06451 0.31 -1.2 225,488 - MPMX19_06451 0.31 -0.2 225,488 - MPMX19_06451 0.31 -0.5 225,488 - MPMX19_06451 0.31 -0.7 225,488 - MPMX19_06451 0.31 -2.4 225,488 - MPMX19_06451 0.31 -1.4 225,496 + MPMX19_06451 0.32 -2.1 225,496 + MPMX19_06451 0.32 -0.8 225,496 + MPMX19_06451 0.32 -1.1 225,496 + MPMX19_06451 0.32 -1.1 225,496 + MPMX19_06451 0.32 -0.7 225,497 - MPMX19_06451 0.32 -0.2 225,497 - MPMX19_06451 0.32 -0.3 225,497 - MPMX19_06451 0.32 -0.7 225,497 - MPMX19_06451 0.32 -0.9 225,529 - MPMX19_06451 0.35 -0.5 225,586 - MPMX19_06451 0.41 +0.3 225,610 + MPMX19_06451 0.43 +0.2 225,610 + MPMX19_06451 0.43 -0.6 225,640 + MPMX19_06451 0.46 +0.9 225,641 - MPMX19_06451 0.47 +0.0 225,667 + MPMX19_06451 0.49 -1.8 225,667 + MPMX19_06451 0.49 -0.4 225,667 + MPMX19_06451 0.49 +0.2 225,667 + MPMX19_06451 0.49 +0.7 225,668 - MPMX19_06451 0.49 -0.6 225,668 - MPMX19_06451 0.49 +0.5 225,668 - MPMX19_06451 0.49 -0.7 225,688 + MPMX19_06451 0.51 -0.2 225,688 + MPMX19_06451 0.51 +0.8 225,688 + MPMX19_06451 0.51 +1.2 225,790 + MPMX19_06451 0.62 -1.8 225,790 + MPMX19_06451 0.62 -1.0 225,790 + MPMX19_06451 0.62 +0.3 225,790 + MPMX19_06451 0.62 -1.4 225,791 - MPMX19_06451 0.62 -3.0 225,875 + MPMX19_06451 0.71 -1.3 225,876 - MPMX19_06451 0.71 +0.3 225,876 - MPMX19_06451 0.71 -1.3 225,904 + MPMX19_06451 0.74 +0.1 225,904 + MPMX19_06451 0.74 -0.5 225,904 + MPMX19_06451 0.74 -0.1 225,904 + MPMX19_06451 0.74 +0.3 225,904 + MPMX19_06451 0.74 -2.0 225,905 - MPMX19_06451 0.74 -0.5 225,905 - MPMX19_06451 0.74 -0.1 225,905 - MPMX19_06451 0.74 +1.5 225,905 - MPMX19_06451 0.74 -0.5 225,905 - MPMX19_06451 0.74 -2.2 225,905 - MPMX19_06451 0.74 +0.0 225,905 - MPMX19_06451 0.74 -2.5 225,905 - MPMX19_06451 0.74 -0.5 225,906 + MPMX19_06451 0.74 -1.9 225,906 + MPMX19_06451 0.74 +0.8 225,907 - MPMX19_06451 0.74 +0.2 225,907 - MPMX19_06451 0.74 -1.3 225,907 - MPMX19_06451 0.74 -0.6 226,110 - +0.5 226,137 + -0.5 226,137 + -0.1 226,137 + +1.2 226,137 + -0.2 226,138 - +0.7 226,138 - -0.8 226,159 + -1.4 226,159 + -0.8 226,160 - -1.0 226,216 - -1.5 226,216 - -0.3 226,216 - +1.1 226,234 - -1.8 226,242 - -0.9 226,242 - -1.3 226,376 + -0.3 226,394 + +0.9 226,395 - -2.2 226,395 - -0.5 226,395 - -0.8 226,599 + MPMX19_06452 0.23 -1.0 226,599 + MPMX19_06452 0.23 -0.2 226,600 - MPMX19_06452 0.23 +0.2 226,600 - MPMX19_06452 0.23 -1.3 226,600 - MPMX19_06452 0.23 -0.2 226,600 - MPMX19_06452 0.23 +0.3 226,632 + MPMX19_06452 0.25 +1.2 226,632 + MPMX19_06452 0.25 +1.5 226,633 - MPMX19_06452 0.26 -0.2 226,667 + MPMX19_06452 0.28 +0.7 226,668 - MPMX19_06452 0.28 -1.5 226,774 + MPMX19_06452 0.35 -1.5 226,774 + MPMX19_06452 0.35 +0.1 226,775 - MPMX19_06452 0.35 -1.8 226,775 - MPMX19_06452 0.35 -1.4 226,820 + MPMX19_06452 0.38 +0.5 226,820 + MPMX19_06452 0.38 +0.2 226,821 - MPMX19_06452 0.38 -1.1 226,821 - MPMX19_06452 0.38 -0.3 226,821 - MPMX19_06452 0.38 -1.9 226,821 - MPMX19_06452 0.38 +0.0 226,821 - MPMX19_06452 0.38 -1.0 226,821 - MPMX19_06452 0.38 -0.2 227,000 + MPMX19_06452 0.50 -0.8 227,000 + MPMX19_06452 0.50 -0.3 227,000 + MPMX19_06452 0.50 -0.2 227,001 - MPMX19_06452 0.50 +1.7 227,001 - MPMX19_06452 0.50 -0.8 227,142 + MPMX19_06452 0.60 -0.1 227,142 + MPMX19_06452 0.60 -1.0 227,143 - MPMX19_06452 0.60 +1.3 227,269 + MPMX19_06452 0.68 -2.3 227,403 + MPMX19_06452 0.77 +0.3 227,403 + MPMX19_06452 0.77 -0.6 227,404 - MPMX19_06452 0.77 +0.4 227,404 - MPMX19_06452 0.77 +0.3 227,404 - MPMX19_06452 0.77 -0.3 227,404 - MPMX19_06452 0.77 -0.5 227,404 - MPMX19_06452 0.77 +0.7 227,404 - MPMX19_06452 0.77 +1.2 227,404 - MPMX19_06452 0.77 +0.7 227,613 + -0.3 227,613 + +0.2 227,613 + +0.9 227,613 + -1.3 227,613 + -0.1 227,613 + -0.7 227,613 + -0.5 227,613 + -1.6 227,613 + -1.1 227,613 + +0.5 227,613 + -1.4 227,614 - -0.8 227,614 - +0.2 227,614 - -0.3 227,614 - -0.8 227,614 - -0.5 227,614 - -0.6 227,614 - +0.4 227,614 - -0.7 227,614 - -1.6 227,614 - -1.4 227,614 - +0.3 227,614 - -0.3 227,614 - -0.5 227,634 + -1.7 227,634 + -2.1 227,635 - -0.4 227,635 - +0.2 227,635 - -1.4 227,635 - -0.1 227,707 + -0.3 227,707 + -0.8 227,707 + -0.0 227,707 + -0.3 227,708 - -1.2 227,708 - -1.2 227,708 - +1.3 227,708 - -0.5 227,708 - -1.0 227,708 - -0.7 227,708 - -0.5 227,728 + -0.8 227,728 + -1.4 227,728 + +0.3 227,728 + -0.3 227,729 - +1.7 227,729 - -0.1 227,729 - -0.2 227,729 - -2.0 227,729 - -0.3 227,762 + +0.7 227,762 + -0.5 227,762 + +0.8 227,762 + -0.8 227,762 + +0.5 227,762 + -0.7 227,762 + +0.2 227,762 + -0.8 227,762 + -1.1 227,762 + +0.3 227,763 - -0.1 227,763 - -1.0 227,763 - -0.7 227,763 - -0.1 227,763 - -2.5 227,763 - +0.1 228,009 + MPMX19_06453 0.31 -0.5 228,009 + MPMX19_06453 0.31 +0.0 228,010 - MPMX19_06453 0.31 -0.1 228,278 + MPMX19_06453 0.62 +0.9 228,278 + MPMX19_06453 0.62 -3.0 228,278 + MPMX19_06453 0.62 -0.4 228,278 + MPMX19_06453 0.62 -2.0 228,278 + MPMX19_06453 0.62 +1.2 228,278 + MPMX19_06453 0.62 +0.0 228,278 + MPMX19_06453 0.62 -0.7 228,278 + MPMX19_06453 0.62 -0.7 228,279 - MPMX19_06453 0.62 +0.2 228,279 - MPMX19_06453 0.62 -1.9 228,279 - MPMX19_06453 0.62 -0.3 228,279 - MPMX19_06453 0.62 -0.2 228,279 - MPMX19_06453 0.62 -1.0 228,279 - MPMX19_06453 0.62 -1.1 228,279 - MPMX19_06453 0.62 -0.8 228,279 - MPMX19_06453 0.62 +0.4 228,507 - MPMX19_06453 0.88 +0.2 228,596 + -1.2 228,597 - -1.2 228,597 - -1.5 228,617 + +0.2 228,617 + -0.5 228,617 + -0.7 228,618 - -1.6 228,618 - -0.3 228,618 - -0.7 228,618 - +1.5 228,618 - -0.3 228,618 - +0.0 228,630 + +0.5 228,630 + -0.7 228,630 + +0.9 228,630 + +0.7 228,631 - -1.0 228,631 - -0.3 228,652 + -0.1 228,653 - -1.0 228,653 - -0.8 228,667 + +0.2 228,684 + +0.0 228,684 + +0.9 228,684 + -0.1 228,684 + -0.3 228,685 - -0.5 228,685 - -0.8 228,685 - -1.2 228,685 - -1.2 228,685 - +0.7
Or see this region's nucleotide sequence