Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06265

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_06265 and MPMX19_06266 are separated by 130 nucleotidesMPMX19_06266 and MPMX19_06267 are separated by 433 nucleotides MPMX19_06265: MPMX19_06265 - hypothetical protein, at 16,571 to 17,194 _06265 MPMX19_06266: MPMX19_06266 - hypothetical protein, at 17,325 to 17,687 _06266 MPMX19_06267: MPMX19_06267 - hypothetical protein, at 18,121 to 18,384 _06267 Position (kb) 16 17 18Strain fitness (log2 ratio) -3 -2 -1 0 1at 15.692 kb on + strandat 15.692 kb on + strandat 15.692 kb on + strandat 15.693 kb on - strandat 15.793 kb on + strandat 15.793 kb on + strandat 15.793 kb on + strandat 15.793 kb on + strandat 15.892 kb on + strandat 15.892 kb on + strandat 16.037 kb on + strandat 16.037 kb on + strandat 16.037 kb on + strandat 16.037 kb on + strandat 16.037 kb on + strandat 16.037 kb on + strandat 16.038 kb on - strandat 16.038 kb on - strandat 16.038 kb on - strandat 16.038 kb on - strandat 16.244 kb on + strandat 16.244 kb on + strandat 16.244 kb on + strandat 16.244 kb on + strandat 16.245 kb on - strandat 16.245 kb on - strandat 16.245 kb on - strandat 16.245 kb on - strandat 16.245 kb on - strandat 16.245 kb on - strandat 16.245 kb on - strandat 16.245 kb on - strandat 17.412 kb on + strand, within MPMX19_06266at 17.413 kb on - strand, within MPMX19_06266at 17.413 kb on - strand, within MPMX19_06266at 17.567 kb on + strand, within MPMX19_06266at 17.921 kb on + strandat 17.922 kb on - strandat 17.922 kb on - strandat 17.995 kb on + strandat 18.003 kb on + strandat 18.003 kb on + strandat 18.003 kb on + strandat 18.003 kb on + strandat 18.004 kb on - strandat 18.004 kb on - strandat 18.004 kb on - strandat 18.004 kb on - strandat 18.004 kb on - strandat 18.004 kb on - strandat 18.041 kb on + strandat 18.041 kb on + strandat 18.041 kb on + strandat 18.041 kb on + strandat 18.041 kb on + strandat 18.041 kb on + strandat 18.042 kb on - strandat 18.042 kb on - strandat 18.042 kb on - strandat 18.042 kb on - strandat 18.042 kb on - strandat 18.058 kb on - strandat 18.123 kb on - strandat 18.132 kb on + strandat 18.132 kb on + strandat 18.132 kb on + strandat 18.133 kb on - strandat 18.133 kb on - strandat 18.133 kb on - strandat 18.133 kb on - strandat 18.133 kb on - strandat 18.139 kb on - strandat 18.139 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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15,692 + -1.4
15,692 + +0.7
15,692 + -0.4
15,693 - -1.6
15,793 + -0.3
15,793 + -0.3
15,793 + -1.1
15,793 + -0.7
15,892 + +0.5
15,892 + -0.4
16,037 + -1.0
16,037 + -0.4
16,037 + +0.1
16,037 + -0.1
16,037 + -0.2
16,037 + -0.5
16,038 - +0.0
16,038 - +0.7
16,038 - -0.8
16,038 - +0.0
16,244 + +1.3
16,244 + -0.1
16,244 + -0.8
16,244 + -0.3
16,245 - +0.2
16,245 - -1.0
16,245 - -0.9
16,245 - +1.0
16,245 - -0.5
16,245 - -1.0
16,245 - +0.1
16,245 - -0.5
17,412 + MPMX19_06266 0.24 -0.3
17,413 - MPMX19_06266 0.24 -1.0
17,413 - MPMX19_06266 0.24 +0.0
17,567 + MPMX19_06266 0.67 -1.0
17,921 + -1.4
17,922 - -0.3
17,922 - -0.3
17,995 + +0.7
18,003 + -0.7
18,003 + -1.1
18,003 + -0.1
18,003 + -0.5
18,004 - +1.3
18,004 - -1.5
18,004 - -3.1
18,004 - -0.1
18,004 - -0.6
18,004 - -1.2
18,041 + +1.5
18,041 + -1.6
18,041 + -0.3
18,041 + -2.1
18,041 + -2.0
18,041 + +0.2
18,042 - -1.8
18,042 - -0.8
18,042 - -0.4
18,042 - -0.8
18,042 - +0.3
18,058 - +0.7
18,123 - -0.7
18,132 + -1.2
18,132 + -1.4
18,132 + +0.6
18,133 - -2.3
18,133 - -0.5
18,133 - -1.3
18,133 - +0.2
18,133 - -0.7
18,139 - -0.7
18,139 - -1.9

Or see this region's nucleotide sequence