Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05753

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_05752 and MPMX19_05753 are separated by 193 nucleotidesMPMX19_05753 and MPMX19_05754 are separated by 97 nucleotides MPMX19_05752: MPMX19_05752 - Glutathione hydrolase proenzyme, at 471,887 to 473,683 _05752 MPMX19_05753: MPMX19_05753 - hypothetical protein, at 473,877 to 474,188 _05753 MPMX19_05754: MPMX19_05754 - Sensor histidine kinase RcsC, at 474,286 to 476,556 _05754 Position (kb) 473 474 475Strain fitness (log2 ratio) -3 -2 -1 0 1at 472.899 kb on + strand, within MPMX19_05752at 472.899 kb on + strand, within MPMX19_05752at 472.899 kb on + strand, within MPMX19_05752at 472.899 kb on + strand, within MPMX19_05752at 472.899 kb on + strand, within MPMX19_05752at 472.899 kb on + strand, within MPMX19_05752at 472.899 kb on + strand, within MPMX19_05752at 472.899 kb on + strand, within MPMX19_05752at 472.899 kb on + strand, within MPMX19_05752at 472.899 kb on + strand, within MPMX19_05752at 472.899 kb on + strand, within MPMX19_05752at 472.899 kb on + strand, within MPMX19_05752at 472.899 kb on + strand, within MPMX19_05752at 472.899 kb on + strand, within MPMX19_05752at 472.900 kb on - strand, within MPMX19_05752at 472.900 kb on - strand, within MPMX19_05752at 472.900 kb on - strand, within MPMX19_05752at 472.900 kb on - strand, within MPMX19_05752at 472.900 kb on - strand, within MPMX19_05752at 472.900 kb on - strand, within MPMX19_05752at 472.900 kb on - strand, within MPMX19_05752at 472.900 kb on - strand, within MPMX19_05752at 472.900 kb on - strand, within MPMX19_05752at 472.900 kb on - strand, within MPMX19_05752at 473.142 kb on + strand, within MPMX19_05752at 473.143 kb on - strand, within MPMX19_05752at 473.205 kb on + strand, within MPMX19_05752at 473.205 kb on + strand, within MPMX19_05752at 473.206 kb on - strand, within MPMX19_05752at 473.206 kb on - strand, within MPMX19_05752at 473.206 kb on - strand, within MPMX19_05752at 473.206 kb on - strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.247 kb on + strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.248 kb on - strand, within MPMX19_05752at 473.502 kb on + strand, within MPMX19_05752at 473.514 kb on + strandat 473.514 kb on + strandat 473.514 kb on + strandat 473.514 kb on + strandat 473.514 kb on + strandat 473.515 kb on - strandat 473.515 kb on - strandat 473.526 kb on + strandat 473.527 kb on - strandat 473.527 kb on - strandat 473.527 kb on - strandat 473.527 kb on - strandat 473.808 kb on - strandat 473.808 kb on - strandat 473.881 kb on + strandat 473.881 kb on + strandat 473.881 kb on + strandat 473.881 kb on + strandat 473.881 kb on + strandat 473.881 kb on + strandat 473.882 kb on - strandat 473.882 kb on - strandat 473.882 kb on - strandat 473.882 kb on - strandat 473.882 kb on - strandat 473.882 kb on - strandat 473.882 kb on - strandat 473.926 kb on + strand, within MPMX19_05753at 474.157 kb on + strandat 474.157 kb on + strandat 474.157 kb on + strandat 474.157 kb on + strandat 474.157 kb on + strandat 474.407 kb on + strandat 474.407 kb on + strandat 474.408 kb on - strandat 474.408 kb on - strandat 474.408 kb on - strandat 474.596 kb on + strand, within MPMX19_05754at 474.596 kb on + strand, within MPMX19_05754at 474.755 kb on + strand, within MPMX19_05754at 474.755 kb on + strand, within MPMX19_05754at 474.755 kb on + strand, within MPMX19_05754at 474.755 kb on + strand, within MPMX19_05754at 474.755 kb on + strand, within MPMX19_05754at 474.755 kb on + strand, within MPMX19_05754at 474.756 kb on - strand, within MPMX19_05754at 474.756 kb on - strand, within MPMX19_05754at 474.756 kb on - strand, within MPMX19_05754at 474.756 kb on - strand, within MPMX19_05754at 474.756 kb on - strand, within MPMX19_05754at 474.756 kb on - strand, within MPMX19_05754at 474.756 kb on - strand, within MPMX19_05754at 474.756 kb on - strand, within MPMX19_05754at 474.756 kb on - strand, within MPMX19_05754at 474.756 kb on - strand, within MPMX19_05754at 474.956 kb on + strand, within MPMX19_05754at 474.956 kb on + strand, within MPMX19_05754at 474.956 kb on + strand, within MPMX19_05754at 474.956 kb on + strand, within MPMX19_05754at 474.956 kb on + strand, within MPMX19_05754at 474.956 kb on + strand, within MPMX19_05754at 474.956 kb on + strand, within MPMX19_05754at 474.956 kb on + strand, within MPMX19_05754at 474.956 kb on + strand, within MPMX19_05754at 474.956 kb on + strand, within MPMX19_05754at 474.956 kb on + strand, within MPMX19_05754at 474.956 kb on + strand, within MPMX19_05754at 474.956 kb on + strand, within MPMX19_05754at 474.956 kb on + strand, within MPMX19_05754at 474.956 kb on + strand, within MPMX19_05754at 474.956 kb on + strand, within MPMX19_05754at 474.956 kb on + strand, within MPMX19_05754at 474.956 kb on + strand, within MPMX19_05754at 474.956 kb on + strand, within MPMX19_05754at 474.956 kb on + strand, within MPMX19_05754at 474.956 kb on + strand, within MPMX19_05754at 474.956 kb on + strand, within MPMX19_05754at 474.956 kb on + strand, within MPMX19_05754at 474.957 kb on - strand, within MPMX19_05754at 474.957 kb on - strand, within MPMX19_05754at 474.957 kb on - strand, within MPMX19_05754at 474.957 kb on - strand, within MPMX19_05754at 474.957 kb on - strand, within MPMX19_05754at 474.957 kb on - strand, within MPMX19_05754at 474.957 kb on - strand, within MPMX19_05754at 474.957 kb on - strand, within MPMX19_05754at 474.957 kb on - strand, within MPMX19_05754at 474.957 kb on - strand, within MPMX19_05754at 474.957 kb on - strand, within MPMX19_05754at 474.957 kb on - strand, within MPMX19_05754at 474.957 kb on - strand, within MPMX19_05754at 474.957 kb on - strand, within MPMX19_05754at 474.957 kb on - strand, within MPMX19_05754at 474.957 kb on - strand, within MPMX19_05754

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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472,899 + MPMX19_05752 0.56 -0.2
472,899 + MPMX19_05752 0.56 -1.1
472,899 + MPMX19_05752 0.56 -0.4
472,899 + MPMX19_05752 0.56 -0.9
472,899 + MPMX19_05752 0.56 -2.6
472,899 + MPMX19_05752 0.56 -0.2
472,899 + MPMX19_05752 0.56 -0.4
472,899 + MPMX19_05752 0.56 -0.9
472,899 + MPMX19_05752 0.56 -0.4
472,899 + MPMX19_05752 0.56 -1.1
472,899 + MPMX19_05752 0.56 -0.3
472,899 + MPMX19_05752 0.56 +0.8
472,899 + MPMX19_05752 0.56 -1.6
472,899 + MPMX19_05752 0.56 -2.3
472,900 - MPMX19_05752 0.56 -1.3
472,900 - MPMX19_05752 0.56 +0.4
472,900 - MPMX19_05752 0.56 -1.5
472,900 - MPMX19_05752 0.56 -1.5
472,900 - MPMX19_05752 0.56 -0.2
472,900 - MPMX19_05752 0.56 -0.8
472,900 - MPMX19_05752 0.56 -0.9
472,900 - MPMX19_05752 0.56 -1.0
472,900 - MPMX19_05752 0.56 -1.3
472,900 - MPMX19_05752 0.56 -1.4
473,142 + MPMX19_05752 0.70 +0.6
473,143 - MPMX19_05752 0.70 -1.1
473,205 + MPMX19_05752 0.73 -0.2
473,205 + MPMX19_05752 0.73 -0.2
473,206 - MPMX19_05752 0.73 -0.4
473,206 - MPMX19_05752 0.73 +0.9
473,206 - MPMX19_05752 0.73 -1.7
473,206 - MPMX19_05752 0.73 -0.2
473,247 + MPMX19_05752 0.76 -0.6
473,247 + MPMX19_05752 0.76 -1.2
473,247 + MPMX19_05752 0.76 -0.6
473,247 + MPMX19_05752 0.76 +0.4
473,247 + MPMX19_05752 0.76 -0.8
473,247 + MPMX19_05752 0.76 -0.3
473,247 + MPMX19_05752 0.76 -0.1
473,247 + MPMX19_05752 0.76 -1.0
473,247 + MPMX19_05752 0.76 -0.5
473,247 + MPMX19_05752 0.76 -0.3
473,247 + MPMX19_05752 0.76 -1.7
473,247 + MPMX19_05752 0.76 -1.3
473,247 + MPMX19_05752 0.76 -2.5
473,247 + MPMX19_05752 0.76 -1.2
473,247 + MPMX19_05752 0.76 -1.2
473,247 + MPMX19_05752 0.76 -0.4
473,247 + MPMX19_05752 0.76 -3.0
473,247 + MPMX19_05752 0.76 -2.1
473,247 + MPMX19_05752 0.76 -0.7
473,247 + MPMX19_05752 0.76 -0.9
473,247 + MPMX19_05752 0.76 -0.2
473,247 + MPMX19_05752 0.76 -0.2
473,247 + MPMX19_05752 0.76 -0.2
473,247 + MPMX19_05752 0.76 -0.3
473,247 + MPMX19_05752 0.76 -0.9
473,247 + MPMX19_05752 0.76 -1.7
473,247 + MPMX19_05752 0.76 -1.2
473,247 + MPMX19_05752 0.76 -1.1
473,247 + MPMX19_05752 0.76 -0.3
473,247 + MPMX19_05752 0.76 +0.4
473,247 + MPMX19_05752 0.76 -0.7
473,247 + MPMX19_05752 0.76 +0.4
473,247 + MPMX19_05752 0.76 -1.7
473,247 + MPMX19_05752 0.76 +0.8
473,247 + MPMX19_05752 0.76 -1.2
473,247 + MPMX19_05752 0.76 +0.1
473,247 + MPMX19_05752 0.76 -0.4
473,247 + MPMX19_05752 0.76 -0.2
473,247 + MPMX19_05752 0.76 -1.1
473,247 + MPMX19_05752 0.76 +0.4
473,247 + MPMX19_05752 0.76 +0.2
473,247 + MPMX19_05752 0.76 -1.7
473,248 - MPMX19_05752 0.76 -1.5
473,248 - MPMX19_05752 0.76 -0.8
473,248 - MPMX19_05752 0.76 -0.6
473,248 - MPMX19_05752 0.76 -2.8
473,248 - MPMX19_05752 0.76 -0.0
473,248 - MPMX19_05752 0.76 +0.4
473,248 - MPMX19_05752 0.76 -1.4
473,248 - MPMX19_05752 0.76 +0.2
473,248 - MPMX19_05752 0.76 -0.6
473,248 - MPMX19_05752 0.76 +1.2
473,248 - MPMX19_05752 0.76 -0.3
473,248 - MPMX19_05752 0.76 -0.9
473,248 - MPMX19_05752 0.76 -2.4
473,248 - MPMX19_05752 0.76 -1.9
473,248 - MPMX19_05752 0.76 -0.6
473,248 - MPMX19_05752 0.76 -1.1
473,248 - MPMX19_05752 0.76 -1.8
473,248 - MPMX19_05752 0.76 -0.9
473,248 - MPMX19_05752 0.76 -1.4
473,248 - MPMX19_05752 0.76 +0.4
473,248 - MPMX19_05752 0.76 -1.2
473,248 - MPMX19_05752 0.76 -0.4
473,248 - MPMX19_05752 0.76 -0.5
473,248 - MPMX19_05752 0.76 -0.4
473,248 - MPMX19_05752 0.76 +0.2
473,248 - MPMX19_05752 0.76 -1.0
473,248 - MPMX19_05752 0.76 -0.5
473,248 - MPMX19_05752 0.76 +1.1
473,248 - MPMX19_05752 0.76 -0.4
473,248 - MPMX19_05752 0.76 -0.2
473,248 - MPMX19_05752 0.76 -0.6
473,248 - MPMX19_05752 0.76 +0.1
473,248 - MPMX19_05752 0.76 +0.4
473,248 - MPMX19_05752 0.76 +0.5
473,248 - MPMX19_05752 0.76 -0.6
473,248 - MPMX19_05752 0.76 -0.2
473,248 - MPMX19_05752 0.76 +1.4
473,248 - MPMX19_05752 0.76 -0.2
473,248 - MPMX19_05752 0.76 -1.9
473,248 - MPMX19_05752 0.76 +0.8
473,248 - MPMX19_05752 0.76 -0.4
473,248 - MPMX19_05752 0.76 +0.4
473,248 - MPMX19_05752 0.76 +0.2
473,248 - MPMX19_05752 0.76 -1.1
473,248 - MPMX19_05752 0.76 +0.6
473,248 - MPMX19_05752 0.76 -1.1
473,502 + MPMX19_05752 0.90 -0.1
473,514 + -0.9
473,514 + -0.8
473,514 + -2.2
473,514 + -1.7
473,514 + +0.5
473,515 - -0.2
473,515 - -1.9
473,526 + -0.8
473,527 - -2.0
473,527 - -0.3
473,527 - -1.0
473,527 - -1.1
473,808 - +1.1
473,808 - -1.9
473,881 + +0.8
473,881 + -1.3
473,881 + -2.3
473,881 + +1.1
473,881 + -0.7
473,881 + -0.9
473,882 - -1.3
473,882 - -0.9
473,882 - -1.6
473,882 - -0.4
473,882 - -0.5
473,882 - -0.2
473,882 - -1.1
473,926 + MPMX19_05753 0.16 -0.9
474,157 + -0.4
474,157 + -0.1
474,157 + +0.4
474,157 + -0.8
474,157 + +0.7
474,407 + -1.5
474,407 + +0.4
474,408 - -0.8
474,408 - +0.2
474,408 - -1.4
474,596 + MPMX19_05754 0.14 +1.1
474,596 + MPMX19_05754 0.14 -0.8
474,755 + MPMX19_05754 0.21 -0.6
474,755 + MPMX19_05754 0.21 -0.1
474,755 + MPMX19_05754 0.21 -0.9
474,755 + MPMX19_05754 0.21 -1.2
474,755 + MPMX19_05754 0.21 -0.1
474,755 + MPMX19_05754 0.21 -0.4
474,756 - MPMX19_05754 0.21 -0.2
474,756 - MPMX19_05754 0.21 -0.8
474,756 - MPMX19_05754 0.21 -0.5
474,756 - MPMX19_05754 0.21 -0.9
474,756 - MPMX19_05754 0.21 +0.1
474,756 - MPMX19_05754 0.21 -0.3
474,756 - MPMX19_05754 0.21 -2.2
474,756 - MPMX19_05754 0.21 +1.4
474,756 - MPMX19_05754 0.21 -1.1
474,756 - MPMX19_05754 0.21 -0.9
474,956 + MPMX19_05754 0.30 +0.4
474,956 + MPMX19_05754 0.30 -1.4
474,956 + MPMX19_05754 0.30 -2.2
474,956 + MPMX19_05754 0.30 -0.8
474,956 + MPMX19_05754 0.30 +0.8
474,956 + MPMX19_05754 0.30 -0.5
474,956 + MPMX19_05754 0.30 -0.9
474,956 + MPMX19_05754 0.30 -1.6
474,956 + MPMX19_05754 0.30 +0.6
474,956 + MPMX19_05754 0.30 -0.4
474,956 + MPMX19_05754 0.30 +0.1
474,956 + MPMX19_05754 0.30 -0.6
474,956 + MPMX19_05754 0.30 +0.8
474,956 + MPMX19_05754 0.30 +0.1
474,956 + MPMX19_05754 0.30 -0.3
474,956 + MPMX19_05754 0.30 -1.3
474,956 + MPMX19_05754 0.30 -0.9
474,956 + MPMX19_05754 0.30 -1.1
474,956 + MPMX19_05754 0.30 -0.3
474,956 + MPMX19_05754 0.30 -1.9
474,956 + MPMX19_05754 0.30 +0.7
474,956 + MPMX19_05754 0.30 -2.5
474,956 + MPMX19_05754 0.30 -1.4
474,957 - MPMX19_05754 0.30 -0.8
474,957 - MPMX19_05754 0.30 -0.2
474,957 - MPMX19_05754 0.30 -0.7
474,957 - MPMX19_05754 0.30 -0.3
474,957 - MPMX19_05754 0.30 -0.6
474,957 - MPMX19_05754 0.30 -1.2
474,957 - MPMX19_05754 0.30 -0.2
474,957 - MPMX19_05754 0.30 -0.9
474,957 - MPMX19_05754 0.30 -1.9
474,957 - MPMX19_05754 0.30 +0.1
474,957 - MPMX19_05754 0.30 +0.2
474,957 - MPMX19_05754 0.30 +1.1
474,957 - MPMX19_05754 0.30 +0.4
474,957 - MPMX19_05754 0.30 +0.7
474,957 - MPMX19_05754 0.30 -0.8
474,957 - MPMX19_05754 0.30 +1.0

Or see this region's nucleotide sequence