Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05295 and MPMX19_05296 are separated by 19 nucleotides MPMX19_05296 and MPMX19_05297 are separated by 213 nucleotides MPMX19_05297 and MPMX19_05298 are separated by 599 nucleotides
MPMX19_05295: MPMX19_05295 - hypothetical protein, at 829,552 to 829,863
_05295
MPMX19_05296: MPMX19_05296 - Hydrogenase 1 maturation protease, at 829,883 to 830,533
_05296
MPMX19_05297: MPMX19_05297 - hypothetical protein, at 830,747 to 832,042
_05297
MPMX19_05298: MPMX19_05298 - Periplasmic [NiFeSe] hydrogenase large subunit, at 832,642 to 833,943
_05298
Position (kb) 830
831
832
833 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 829.968 kb on + strand, within MPMX19_05296 at 829.968 kb on + strand, within MPMX19_05296 at 829.968 kb on + strand, within MPMX19_05296 at 829.969 kb on - strand, within MPMX19_05296 at 829.969 kb on - strand, within MPMX19_05296 at 829.969 kb on - strand, within MPMX19_05296 at 829.969 kb on - strand, within MPMX19_05296 at 829.969 kb on - strand, within MPMX19_05296 at 830.118 kb on + strand, within MPMX19_05296 at 830.118 kb on + strand, within MPMX19_05296 at 830.118 kb on + strand, within MPMX19_05296 at 830.119 kb on - strand, within MPMX19_05296 at 830.119 kb on - strand, within MPMX19_05296 at 830.180 kb on + strand, within MPMX19_05296 at 830.180 kb on + strand, within MPMX19_05296 at 830.180 kb on + strand, within MPMX19_05296 at 830.181 kb on - strand, within MPMX19_05296 at 830.181 kb on - strand, within MPMX19_05296 at 830.181 kb on - strand, within MPMX19_05296 at 830.181 kb on - strand, within MPMX19_05296 at 830.301 kb on + strand, within MPMX19_05296 at 830.358 kb on + strand, within MPMX19_05296 at 830.358 kb on + strand, within MPMX19_05296 at 830.358 kb on + strand, within MPMX19_05296 at 830.358 kb on + strand, within MPMX19_05296 at 830.358 kb on + strand, within MPMX19_05296 at 830.358 kb on + strand, within MPMX19_05296 at 830.359 kb on - strand, within MPMX19_05296 at 830.359 kb on - strand, within MPMX19_05296 at 830.359 kb on - strand, within MPMX19_05296 at 830.359 kb on - strand, within MPMX19_05296 at 830.359 kb on - strand, within MPMX19_05296 at 830.359 kb on - strand, within MPMX19_05296 at 830.359 kb on - strand, within MPMX19_05296 at 830.359 kb on - strand, within MPMX19_05296 at 830.589 kb on + strand at 830.589 kb on + strand at 830.589 kb on + strand at 830.589 kb on + strand at 830.589 kb on + strand at 830.590 kb on - strand at 830.642 kb on + strand at 830.643 kb on - strand at 830.667 kb on - strand at 830.667 kb on - strand at 830.692 kb on - strand at 830.692 kb on - strand at 830.692 kb on - strand at 830.727 kb on + strand at 830.727 kb on + strand at 830.728 kb on - strand at 830.728 kb on - strand at 830.809 kb on + strand at 830.809 kb on + strand at 830.809 kb on + strand at 830.810 kb on - strand at 830.810 kb on - strand at 830.810 kb on - strand at 830.810 kb on - strand at 830.810 kb on - strand at 830.810 kb on - strand at 830.856 kb on + strand at 830.856 kb on + strand at 830.856 kb on + strand at 830.856 kb on + strand at 830.856 kb on + strand at 830.856 kb on + strand at 830.856 kb on + strand at 830.856 kb on + strand at 830.856 kb on + strand at 830.856 kb on + strand at 830.857 kb on - strand at 830.857 kb on - strand at 830.857 kb on - strand at 830.857 kb on - strand at 830.857 kb on - strand at 830.857 kb on - strand at 830.857 kb on - strand at 830.956 kb on + strand, within MPMX19_05297 at 830.956 kb on + strand, within MPMX19_05297 at 830.957 kb on - strand, within MPMX19_05297 at 830.957 kb on - strand, within MPMX19_05297 at 830.957 kb on - strand, within MPMX19_05297 at 830.957 kb on - strand, within MPMX19_05297 at 830.957 kb on - strand, within MPMX19_05297 at 831.068 kb on + strand, within MPMX19_05297 at 831.068 kb on + strand, within MPMX19_05297 at 831.069 kb on - strand, within MPMX19_05297 at 831.069 kb on - strand, within MPMX19_05297 at 831.090 kb on + strand, within MPMX19_05297 at 831.090 kb on + strand, within MPMX19_05297 at 831.090 kb on + strand, within MPMX19_05297 at 831.091 kb on - strand, within MPMX19_05297 at 831.091 kb on - strand, within MPMX19_05297 at 831.129 kb on + strand, within MPMX19_05297 at 831.129 kb on + strand, within MPMX19_05297 at 831.130 kb on - strand, within MPMX19_05297 at 831.130 kb on - strand, within MPMX19_05297 at 831.130 kb on - strand, within MPMX19_05297 at 831.130 kb on - strand, within MPMX19_05297 at 831.155 kb on + strand, within MPMX19_05297 at 831.155 kb on + strand, within MPMX19_05297 at 831.156 kb on - strand, within MPMX19_05297 at 831.176 kb on + strand, within MPMX19_05297 at 831.176 kb on + strand, within MPMX19_05297 at 831.177 kb on - strand, within MPMX19_05297 at 831.177 kb on - strand, within MPMX19_05297 at 831.177 kb on - strand, within MPMX19_05297 at 831.177 kb on - strand, within MPMX19_05297 at 831.177 kb on - strand, within MPMX19_05297 at 831.177 kb on - strand, within MPMX19_05297 at 831.213 kb on + strand, within MPMX19_05297 at 831.213 kb on + strand, within MPMX19_05297 at 831.273 kb on + strand, within MPMX19_05297 at 831.274 kb on - strand, within MPMX19_05297 at 831.274 kb on - strand, within MPMX19_05297 at 831.274 kb on - strand, within MPMX19_05297 at 831.274 kb on - strand, within MPMX19_05297 at 831.291 kb on + strand, within MPMX19_05297 at 831.292 kb on - strand, within MPMX19_05297 at 831.304 kb on - strand, within MPMX19_05297 at 831.304 kb on - strand, within MPMX19_05297 at 831.351 kb on + strand, within MPMX19_05297 at 831.351 kb on + strand, within MPMX19_05297 at 831.351 kb on + strand, within MPMX19_05297 at 831.351 kb on + strand, within MPMX19_05297 at 831.351 kb on + strand, within MPMX19_05297 at 831.352 kb on - strand, within MPMX19_05297 at 831.426 kb on + strand, within MPMX19_05297 at 831.426 kb on + strand, within MPMX19_05297 at 831.426 kb on + strand, within MPMX19_05297 at 831.426 kb on + strand, within MPMX19_05297 at 831.426 kb on + strand, within MPMX19_05297 at 831.426 kb on + strand, within MPMX19_05297 at 831.426 kb on + strand, within MPMX19_05297 at 831.426 kb on + strand, within MPMX19_05297 at 831.426 kb on + strand, within MPMX19_05297 at 831.426 kb on + strand, within MPMX19_05297 at 831.426 kb on + strand, within MPMX19_05297 at 831.426 kb on + strand, within MPMX19_05297 at 831.426 kb on + strand, within MPMX19_05297 at 831.426 kb on + strand, within MPMX19_05297 at 831.426 kb on + strand, within MPMX19_05297 at 831.426 kb on + strand, within MPMX19_05297 at 831.426 kb on + strand, within MPMX19_05297 at 831.426 kb on + strand, within MPMX19_05297 at 831.426 kb on + strand, within MPMX19_05297 at 831.426 kb on + strand, within MPMX19_05297 at 831.426 kb on + strand, within MPMX19_05297 at 831.427 kb on - strand, within MPMX19_05297 at 831.427 kb on - strand, within MPMX19_05297 at 831.427 kb on - strand, within MPMX19_05297 at 831.427 kb on - strand, within MPMX19_05297 at 831.427 kb on - strand, within MPMX19_05297 at 831.427 kb on - strand, within MPMX19_05297 at 831.427 kb on - strand, within MPMX19_05297 at 831.427 kb on - strand, within MPMX19_05297 at 831.427 kb on - strand, within MPMX19_05297 at 831.427 kb on - strand, within MPMX19_05297 at 831.427 kb on - strand, within MPMX19_05297 at 831.427 kb on - strand, within MPMX19_05297 at 831.427 kb on - strand, within MPMX19_05297 at 831.427 kb on - strand, within MPMX19_05297 at 831.662 kb on + strand, within MPMX19_05297 at 831.662 kb on + strand, within MPMX19_05297 at 831.662 kb on + strand, within MPMX19_05297 at 831.662 kb on + strand, within MPMX19_05297 at 831.663 kb on - strand, within MPMX19_05297 at 831.771 kb on + strand, within MPMX19_05297 at 831.771 kb on + strand, within MPMX19_05297 at 831.771 kb on + strand, within MPMX19_05297 at 831.771 kb on + strand, within MPMX19_05297 at 831.771 kb on + strand, within MPMX19_05297 at 831.772 kb on - strand, within MPMX19_05297 at 831.772 kb on - strand, within MPMX19_05297 at 831.772 kb on - strand, within MPMX19_05297 at 831.772 kb on - strand, within MPMX19_05297 at 831.772 kb on - strand, within MPMX19_05297 at 831.772 kb on - strand, within MPMX19_05297 at 831.772 kb on - strand, within MPMX19_05297 at 831.772 kb on - strand, within MPMX19_05297 at 831.846 kb on + strand, within MPMX19_05297 at 831.846 kb on + strand, within MPMX19_05297 at 831.847 kb on - strand, within MPMX19_05297 at 831.847 kb on - strand, within MPMX19_05297 at 831.847 kb on - strand, within MPMX19_05297 at 831.847 kb on - strand, within MPMX19_05297 at 832.128 kb on + strand at 832.197 kb on + strand at 832.210 kb on + strand at 832.210 kb on + strand at 832.211 kb on - strand at 832.211 kb on - strand at 832.211 kb on - strand at 832.251 kb on + strand at 832.344 kb on + strand at 832.345 kb on - strand at 832.442 kb on + strand at 832.443 kb on - strand at 832.463 kb on + strand at 832.463 kb on + strand at 832.463 kb on + strand at 832.463 kb on + strand at 832.463 kb on + strand at 832.463 kb on + strand at 832.463 kb on + strand at 832.464 kb on - strand at 832.464 kb on - strand at 832.464 kb on - strand at 832.464 kb on - strand at 832.464 kb on - strand at 832.464 kb on - strand at 832.464 kb on - strand at 832.464 kb on - strand at 832.464 kb on - strand at 832.464 kb on - strand at 832.464 kb on - strand at 832.464 kb on - strand at 832.464 kb on - strand at 832.464 kb on - strand at 832.464 kb on - strand at 832.549 kb on - strand at 832.549 kb on - strand at 832.549 kb on - strand at 832.657 kb on + strand at 832.657 kb on + strand at 832.657 kb on + strand at 832.657 kb on + strand at 832.657 kb on + strand at 832.658 kb on - strand at 832.723 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 829,968 + MPMX19_05296 0.13 -0.5 829,968 + MPMX19_05296 0.13 +0.5 829,968 + MPMX19_05296 0.13 +0.5 829,969 - MPMX19_05296 0.13 -2.6 829,969 - MPMX19_05296 0.13 -0.5 829,969 - MPMX19_05296 0.13 -2.0 829,969 - MPMX19_05296 0.13 -1.4 829,969 - MPMX19_05296 0.13 -1.3 830,118 + MPMX19_05296 0.36 -0.6 830,118 + MPMX19_05296 0.36 -0.3 830,118 + MPMX19_05296 0.36 -1.7 830,119 - MPMX19_05296 0.36 -0.7 830,119 - MPMX19_05296 0.36 +1.1 830,180 + MPMX19_05296 0.46 -0.1 830,180 + MPMX19_05296 0.46 +0.2 830,180 + MPMX19_05296 0.46 -1.4 830,181 - MPMX19_05296 0.46 +0.3 830,181 - MPMX19_05296 0.46 -0.3 830,181 - MPMX19_05296 0.46 +0.6 830,181 - MPMX19_05296 0.46 -1.6 830,301 + MPMX19_05296 0.64 -0.5 830,358 + MPMX19_05296 0.73 +0.1 830,358 + MPMX19_05296 0.73 -0.1 830,358 + MPMX19_05296 0.73 -0.1 830,358 + MPMX19_05296 0.73 +1.7 830,358 + MPMX19_05296 0.73 +0.1 830,358 + MPMX19_05296 0.73 -0.5 830,359 - MPMX19_05296 0.73 +0.3 830,359 - MPMX19_05296 0.73 +0.8 830,359 - MPMX19_05296 0.73 -1.2 830,359 - MPMX19_05296 0.73 +0.8 830,359 - MPMX19_05296 0.73 -1.4 830,359 - MPMX19_05296 0.73 -0.3 830,359 - MPMX19_05296 0.73 +0.5 830,359 - MPMX19_05296 0.73 -1.5 830,589 + -0.7 830,589 + +0.7 830,589 + +0.6 830,589 + +0.9 830,589 + -1.4 830,590 - -0.3 830,642 + +1.5 830,643 - +1.2 830,667 - -1.9 830,667 - -0.6 830,692 - -0.7 830,692 - +1.1 830,692 - +0.0 830,727 + +0.0 830,727 + +0.5 830,728 - -0.3 830,728 - -0.3 830,809 + -0.8 830,809 + +0.5 830,809 + -1.4 830,810 - -1.1 830,810 - -0.7 830,810 - -0.1 830,810 - -0.8 830,810 - -1.8 830,810 - -0.6 830,856 + +0.2 830,856 + -1.5 830,856 + +1.2 830,856 + -2.1 830,856 + -1.4 830,856 + +0.8 830,856 + -1.1 830,856 + +0.9 830,856 + -0.7 830,856 + -0.3 830,857 - -0.9 830,857 - +0.2 830,857 - -1.5 830,857 - -1.8 830,857 - -1.9 830,857 - -0.8 830,857 - -0.1 830,956 + MPMX19_05297 0.16 +0.3 830,956 + MPMX19_05297 0.16 +0.2 830,957 - MPMX19_05297 0.16 -0.7 830,957 - MPMX19_05297 0.16 -0.5 830,957 - MPMX19_05297 0.16 +0.2 830,957 - MPMX19_05297 0.16 +0.5 830,957 - MPMX19_05297 0.16 +0.5 831,068 + MPMX19_05297 0.25 +0.9 831,068 + MPMX19_05297 0.25 -0.7 831,069 - MPMX19_05297 0.25 -0.2 831,069 - MPMX19_05297 0.25 -0.7 831,090 + MPMX19_05297 0.26 -1.8 831,090 + MPMX19_05297 0.26 -1.7 831,090 + MPMX19_05297 0.26 -0.7 831,091 - MPMX19_05297 0.27 -1.7 831,091 - MPMX19_05297 0.27 -1.1 831,129 + MPMX19_05297 0.29 -1.1 831,129 + MPMX19_05297 0.29 -1.4 831,130 - MPMX19_05297 0.30 -1.7 831,130 - MPMX19_05297 0.30 +1.5 831,130 - MPMX19_05297 0.30 -0.8 831,130 - MPMX19_05297 0.30 +1.1 831,155 + MPMX19_05297 0.31 -0.2 831,155 + MPMX19_05297 0.31 -0.5 831,156 - MPMX19_05297 0.32 -2.0 831,176 + MPMX19_05297 0.33 -1.6 831,176 + MPMX19_05297 0.33 -0.4 831,177 - MPMX19_05297 0.33 -1.3 831,177 - MPMX19_05297 0.33 +0.3 831,177 - MPMX19_05297 0.33 -0.7 831,177 - MPMX19_05297 0.33 +2.5 831,177 - MPMX19_05297 0.33 +0.2 831,177 - MPMX19_05297 0.33 -0.1 831,213 + MPMX19_05297 0.36 -1.4 831,213 + MPMX19_05297 0.36 +0.5 831,273 + MPMX19_05297 0.41 -1.4 831,274 - MPMX19_05297 0.41 -1.0 831,274 - MPMX19_05297 0.41 -0.3 831,274 - MPMX19_05297 0.41 -1.5 831,274 - MPMX19_05297 0.41 -0.5 831,291 + MPMX19_05297 0.42 -1.7 831,292 - MPMX19_05297 0.42 +0.7 831,304 - MPMX19_05297 0.43 -0.1 831,304 - MPMX19_05297 0.43 +0.2 831,351 + MPMX19_05297 0.47 -0.7 831,351 + MPMX19_05297 0.47 -0.7 831,351 + MPMX19_05297 0.47 -0.5 831,351 + MPMX19_05297 0.47 +0.5 831,351 + MPMX19_05297 0.47 -0.6 831,352 - MPMX19_05297 0.47 -0.6 831,426 + MPMX19_05297 0.52 -1.5 831,426 + MPMX19_05297 0.52 -0.9 831,426 + MPMX19_05297 0.52 -0.8 831,426 + MPMX19_05297 0.52 +1.5 831,426 + MPMX19_05297 0.52 -2.2 831,426 + MPMX19_05297 0.52 +0.5 831,426 + MPMX19_05297 0.52 -1.0 831,426 + MPMX19_05297 0.52 -0.4 831,426 + MPMX19_05297 0.52 +0.2 831,426 + MPMX19_05297 0.52 -1.1 831,426 + MPMX19_05297 0.52 -1.8 831,426 + MPMX19_05297 0.52 +1.3 831,426 + MPMX19_05297 0.52 -0.1 831,426 + MPMX19_05297 0.52 +1.1 831,426 + MPMX19_05297 0.52 -0.8 831,426 + MPMX19_05297 0.52 -0.1 831,426 + MPMX19_05297 0.52 -0.8 831,426 + MPMX19_05297 0.52 +0.1 831,426 + MPMX19_05297 0.52 +0.2 831,426 + MPMX19_05297 0.52 +0.1 831,426 + MPMX19_05297 0.52 -1.9 831,427 - MPMX19_05297 0.52 -1.4 831,427 - MPMX19_05297 0.52 -0.5 831,427 - MPMX19_05297 0.52 -2.2 831,427 - MPMX19_05297 0.52 -0.7 831,427 - MPMX19_05297 0.52 -1.1 831,427 - MPMX19_05297 0.52 -0.7 831,427 - MPMX19_05297 0.52 -2.3 831,427 - MPMX19_05297 0.52 -0.5 831,427 - MPMX19_05297 0.52 -1.3 831,427 - MPMX19_05297 0.52 +0.5 831,427 - MPMX19_05297 0.52 -0.5 831,427 - MPMX19_05297 0.52 -0.8 831,427 - MPMX19_05297 0.52 -0.9 831,427 - MPMX19_05297 0.52 -0.5 831,662 + MPMX19_05297 0.71 +1.2 831,662 + MPMX19_05297 0.71 +0.3 831,662 + MPMX19_05297 0.71 +0.0 831,662 + MPMX19_05297 0.71 -3.6 831,663 - MPMX19_05297 0.71 -1.1 831,771 + MPMX19_05297 0.79 -0.7 831,771 + MPMX19_05297 0.79 +0.9 831,771 + MPMX19_05297 0.79 -0.7 831,771 + MPMX19_05297 0.79 +0.7 831,771 + MPMX19_05297 0.79 -0.2 831,772 - MPMX19_05297 0.79 -0.7 831,772 - MPMX19_05297 0.79 +0.9 831,772 - MPMX19_05297 0.79 -0.8 831,772 - MPMX19_05297 0.79 +0.5 831,772 - MPMX19_05297 0.79 +0.5 831,772 - MPMX19_05297 0.79 +0.0 831,772 - MPMX19_05297 0.79 -0.4 831,772 - MPMX19_05297 0.79 -1.0 831,846 + MPMX19_05297 0.85 -1.8 831,846 + MPMX19_05297 0.85 -0.1 831,847 - MPMX19_05297 0.85 -1.0 831,847 - MPMX19_05297 0.85 -0.3 831,847 - MPMX19_05297 0.85 +0.2 831,847 - MPMX19_05297 0.85 -0.2 832,128 + +0.6 832,197 + -1.4 832,210 + -0.8 832,210 + -0.7 832,211 - +0.6 832,211 - +0.1 832,211 - -1.1 832,251 + +0.0 832,344 + -1.1 832,345 - -0.3 832,442 + +0.5 832,443 - +0.9 832,463 + -1.2 832,463 + +2.1 832,463 + +1.2 832,463 + -0.6 832,463 + -1.2 832,463 + -2.4 832,463 + -0.2 832,464 - -1.4 832,464 - -0.7 832,464 - -0.9 832,464 - -0.7 832,464 - +1.1 832,464 - -0.8 832,464 - -1.3 832,464 - -0.3 832,464 - -2.4 832,464 - +0.1 832,464 - +0.4 832,464 - -0.7 832,464 - -0.5 832,464 - -0.5 832,464 - -0.3 832,549 - +0.9 832,549 - +0.2 832,549 - -1.2 832,657 + -0.2 832,657 + +1.5 832,657 + -1.1 832,657 + -0.2 832,657 + -0.3 832,658 - -2.0 832,723 + -1.9
Or see this region's nucleotide sequence