Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05227 and MPMX19_05228 overlap by 4 nucleotides MPMX19_05228 and MPMX19_05229 overlap by 4 nucleotides MPMX19_05229 and MPMX19_05230 are separated by 103 nucleotides
MPMX19_05227: MPMX19_05227 - hypothetical protein, at 754,075 to 754,356
_05227
MPMX19_05228: MPMX19_05228 - Anti-sigma-E factor ChrR, at 754,353 to 755,039
_05228
MPMX19_05229: MPMX19_05229 - ECF RNA polymerase sigma factor RpoE, at 755,036 to 755,659
_05229
MPMX19_05230: MPMX19_05230 - putative MFS-type transporter YcaD, at 755,763 to 757,001
_05230
Position (kb)
755
756 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 754.159 kb on + strand, within MPMX19_05227 at 754.159 kb on + strand, within MPMX19_05227 at 754.159 kb on + strand, within MPMX19_05227 at 754.159 kb on + strand, within MPMX19_05227 at 754.159 kb on + strand, within MPMX19_05227 at 754.159 kb on + strand, within MPMX19_05227 at 754.159 kb on + strand, within MPMX19_05227 at 754.159 kb on + strand, within MPMX19_05227 at 754.159 kb on + strand, within MPMX19_05227 at 754.159 kb on + strand, within MPMX19_05227 at 754.159 kb on + strand, within MPMX19_05227 at 754.159 kb on + strand, within MPMX19_05227 at 754.160 kb on - strand, within MPMX19_05227 at 754.160 kb on - strand, within MPMX19_05227 at 754.160 kb on - strand, within MPMX19_05227 at 754.315 kb on + strand, within MPMX19_05227 at 754.315 kb on + strand, within MPMX19_05227 at 754.315 kb on + strand, within MPMX19_05227 at 754.315 kb on + strand, within MPMX19_05227 at 754.315 kb on + strand, within MPMX19_05227 at 754.315 kb on + strand, within MPMX19_05227 at 754.316 kb on - strand, within MPMX19_05227 at 754.316 kb on - strand, within MPMX19_05227 at 754.316 kb on - strand, within MPMX19_05227 at 754.316 kb on - strand, within MPMX19_05227 at 754.316 kb on - strand, within MPMX19_05227 at 754.316 kb on - strand, within MPMX19_05227 at 754.316 kb on - strand, within MPMX19_05227 at 754.316 kb on - strand, within MPMX19_05227 at 754.336 kb on + strand at 754.336 kb on + strand at 754.336 kb on + strand at 754.336 kb on + strand at 754.337 kb on - strand at 754.444 kb on + strand, within MPMX19_05228 at 754.444 kb on + strand, within MPMX19_05228 at 754.445 kb on - strand, within MPMX19_05228 at 754.445 kb on - strand, within MPMX19_05228 at 754.445 kb on - strand, within MPMX19_05228 at 754.445 kb on - strand, within MPMX19_05228 at 754.445 kb on - strand, within MPMX19_05228 at 754.445 kb on - strand, within MPMX19_05228 at 754.445 kb on - strand, within MPMX19_05228 at 754.465 kb on + strand, within MPMX19_05228 at 754.465 kb on + strand, within MPMX19_05228 at 754.465 kb on + strand, within MPMX19_05228 at 754.465 kb on + strand, within MPMX19_05228 at 754.465 kb on + strand, within MPMX19_05228 at 754.465 kb on + strand, within MPMX19_05228 at 754.465 kb on + strand, within MPMX19_05228 at 754.465 kb on + strand, within MPMX19_05228 at 754.465 kb on + strand, within MPMX19_05228 at 754.465 kb on + strand, within MPMX19_05228 at 754.466 kb on - strand, within MPMX19_05228 at 754.466 kb on - strand, within MPMX19_05228 at 754.466 kb on - strand, within MPMX19_05228 at 754.466 kb on - strand, within MPMX19_05228 at 754.466 kb on - strand, within MPMX19_05228 at 754.466 kb on - strand, within MPMX19_05228 at 754.466 kb on - strand, within MPMX19_05228 at 754.466 kb on - strand, within MPMX19_05228 at 754.466 kb on - strand, within MPMX19_05228 at 754.466 kb on - strand, within MPMX19_05228 at 754.466 kb on - strand, within MPMX19_05228 at 754.489 kb on + strand, within MPMX19_05228 at 754.489 kb on + strand, within MPMX19_05228 at 754.490 kb on - strand, within MPMX19_05228 at 754.498 kb on + strand, within MPMX19_05228 at 754.498 kb on + strand, within MPMX19_05228 at 754.498 kb on + strand, within MPMX19_05228 at 754.499 kb on - strand, within MPMX19_05228 at 754.499 kb on - strand, within MPMX19_05228 at 754.499 kb on - strand, within MPMX19_05228 at 754.903 kb on + strand, within MPMX19_05228 at 754.903 kb on + strand, within MPMX19_05228 at 754.903 kb on + strand, within MPMX19_05228 at 754.903 kb on + strand, within MPMX19_05228 at 754.903 kb on + strand, within MPMX19_05228 at 754.903 kb on + strand, within MPMX19_05228 at 754.904 kb on - strand, within MPMX19_05228 at 754.904 kb on - strand, within MPMX19_05228 at 754.904 kb on - strand, within MPMX19_05228 at 754.904 kb on - strand, within MPMX19_05228 at 754.904 kb on - strand, within MPMX19_05228 at 754.936 kb on + strand, within MPMX19_05228 at 754.936 kb on + strand, within MPMX19_05228 at 754.936 kb on + strand, within MPMX19_05228 at 754.937 kb on - strand, within MPMX19_05228 at 755.095 kb on + strand at 755.157 kb on + strand, within MPMX19_05229 at 755.158 kb on - strand, within MPMX19_05229 at 755.158 kb on - strand, within MPMX19_05229 at 755.158 kb on - strand, within MPMX19_05229 at 755.478 kb on + strand, within MPMX19_05229 at 755.478 kb on + strand, within MPMX19_05229 at 755.478 kb on + strand, within MPMX19_05229 at 755.478 kb on + strand, within MPMX19_05229 at 755.478 kb on + strand, within MPMX19_05229 at 755.479 kb on - strand, within MPMX19_05229 at 755.479 kb on - strand, within MPMX19_05229 at 755.479 kb on - strand, within MPMX19_05229 at 755.479 kb on - strand, within MPMX19_05229 at 755.479 kb on - strand, within MPMX19_05229 at 755.479 kb on - strand, within MPMX19_05229 at 755.479 kb on - strand, within MPMX19_05229 at 755.479 kb on - strand, within MPMX19_05229 at 755.479 kb on - strand, within MPMX19_05229 at 755.479 kb on - strand, within MPMX19_05229 at 755.479 kb on - strand, within MPMX19_05229 at 755.696 kb on - strand at 755.710 kb on - strand at 755.738 kb on + strand at 755.738 kb on + strand at 755.738 kb on + strand at 755.738 kb on + strand at 755.738 kb on + strand at 755.738 kb on + strand at 755.738 kb on + strand at 755.739 kb on - strand at 755.739 kb on - strand at 755.739 kb on - strand at 755.739 kb on - strand at 755.739 kb on - strand at 755.764 kb on + strand at 755.765 kb on - strand at 755.765 kb on - strand at 755.890 kb on + strand, within MPMX19_05230 at 755.890 kb on + strand, within MPMX19_05230 at 755.890 kb on + strand, within MPMX19_05230 at 755.890 kb on + strand, within MPMX19_05230 at 755.890 kb on + strand, within MPMX19_05230 at 755.891 kb on - strand, within MPMX19_05230 at 755.891 kb on - strand, within MPMX19_05230 at 755.891 kb on - strand, within MPMX19_05230 at 755.891 kb on - strand, within MPMX19_05230 at 755.891 kb on - strand, within MPMX19_05230 at 756.052 kb on + strand, within MPMX19_05230 at 756.052 kb on + strand, within MPMX19_05230 at 756.052 kb on + strand, within MPMX19_05230 at 756.052 kb on + strand, within MPMX19_05230 at 756.052 kb on + strand, within MPMX19_05230 at 756.053 kb on - strand, within MPMX19_05230 at 756.053 kb on - strand, within MPMX19_05230 at 756.053 kb on - strand, within MPMX19_05230 at 756.053 kb on - strand, within MPMX19_05230 at 756.053 kb on - strand, within MPMX19_05230 at 756.349 kb on + strand, within MPMX19_05230 at 756.349 kb on + strand, within MPMX19_05230 at 756.349 kb on + strand, within MPMX19_05230 at 756.350 kb on - strand, within MPMX19_05230 at 756.350 kb on - strand, within MPMX19_05230 at 756.350 kb on - strand, within MPMX19_05230 at 756.583 kb on + strand, within MPMX19_05230 at 756.583 kb on + strand, within MPMX19_05230 at 756.584 kb on - strand, within MPMX19_05230 at 756.584 kb on - strand, within MPMX19_05230 at 756.584 kb on - strand, within MPMX19_05230 at 756.598 kb on + strand, within MPMX19_05230 at 756.598 kb on + strand, within MPMX19_05230 at 756.598 kb on + strand, within MPMX19_05230 at 756.598 kb on + strand, within MPMX19_05230 at 756.598 kb on + strand, within MPMX19_05230 at 756.598 kb on + strand, within MPMX19_05230 at 756.598 kb on + strand, within MPMX19_05230 at 756.598 kb on + strand, within MPMX19_05230 at 756.599 kb on - strand, within MPMX19_05230 at 756.599 kb on - strand, within MPMX19_05230 at 756.599 kb on - strand, within MPMX19_05230 at 756.599 kb on - strand, within MPMX19_05230 at 756.599 kb on - strand, within MPMX19_05230 at 756.599 kb on - strand, within MPMX19_05230 at 756.599 kb on - strand, within MPMX19_05230 at 756.599 kb on - strand, within MPMX19_05230 at 756.599 kb on - strand, within MPMX19_05230 at 756.599 kb on - strand, within MPMX19_05230
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 754,159 + MPMX19_05227 0.30 -1.5 754,159 + MPMX19_05227 0.30 -0.8 754,159 + MPMX19_05227 0.30 +0.9 754,159 + MPMX19_05227 0.30 -0.3 754,159 + MPMX19_05227 0.30 -0.3 754,159 + MPMX19_05227 0.30 -1.1 754,159 + MPMX19_05227 0.30 -0.7 754,159 + MPMX19_05227 0.30 -0.2 754,159 + MPMX19_05227 0.30 -1.1 754,159 + MPMX19_05227 0.30 -0.8 754,159 + MPMX19_05227 0.30 -0.1 754,159 + MPMX19_05227 0.30 -1.5 754,160 - MPMX19_05227 0.30 -1.2 754,160 - MPMX19_05227 0.30 -0.5 754,160 - MPMX19_05227 0.30 -0.4 754,315 + MPMX19_05227 0.85 -0.4 754,315 + MPMX19_05227 0.85 +0.2 754,315 + MPMX19_05227 0.85 -0.8 754,315 + MPMX19_05227 0.85 -0.7 754,315 + MPMX19_05227 0.85 +0.7 754,315 + MPMX19_05227 0.85 -0.8 754,316 - MPMX19_05227 0.85 -0.8 754,316 - MPMX19_05227 0.85 +0.2 754,316 - MPMX19_05227 0.85 -0.1 754,316 - MPMX19_05227 0.85 +0.5 754,316 - MPMX19_05227 0.85 -0.5 754,316 - MPMX19_05227 0.85 +0.9 754,316 - MPMX19_05227 0.85 -0.5 754,316 - MPMX19_05227 0.85 -0.9 754,336 + +0.2 754,336 + -0.6 754,336 + +0.1 754,336 + -0.8 754,337 - -0.8 754,444 + MPMX19_05228 0.13 +0.5 754,444 + MPMX19_05228 0.13 +0.2 754,445 - MPMX19_05228 0.13 -0.3 754,445 - MPMX19_05228 0.13 -2.1 754,445 - MPMX19_05228 0.13 -0.3 754,445 - MPMX19_05228 0.13 +0.0 754,445 - MPMX19_05228 0.13 -0.3 754,445 - MPMX19_05228 0.13 -0.4 754,445 - MPMX19_05228 0.13 -1.5 754,465 + MPMX19_05228 0.16 -1.1 754,465 + MPMX19_05228 0.16 +0.2 754,465 + MPMX19_05228 0.16 +0.5 754,465 + MPMX19_05228 0.16 +0.1 754,465 + MPMX19_05228 0.16 +0.2 754,465 + MPMX19_05228 0.16 +0.7 754,465 + MPMX19_05228 0.16 -1.2 754,465 + MPMX19_05228 0.16 +0.1 754,465 + MPMX19_05228 0.16 -0.4 754,465 + MPMX19_05228 0.16 -0.1 754,466 - MPMX19_05228 0.16 +0.3 754,466 - MPMX19_05228 0.16 -0.5 754,466 - MPMX19_05228 0.16 -0.5 754,466 - MPMX19_05228 0.16 -0.1 754,466 - MPMX19_05228 0.16 -1.1 754,466 - MPMX19_05228 0.16 -0.3 754,466 - MPMX19_05228 0.16 +0.4 754,466 - MPMX19_05228 0.16 -1.0 754,466 - MPMX19_05228 0.16 -0.3 754,466 - MPMX19_05228 0.16 -0.1 754,466 - MPMX19_05228 0.16 +1.5 754,489 + MPMX19_05228 0.20 -1.1 754,489 + MPMX19_05228 0.20 -1.8 754,490 - MPMX19_05228 0.20 -0.3 754,498 + MPMX19_05228 0.21 -1.3 754,498 + MPMX19_05228 0.21 -0.3 754,498 + MPMX19_05228 0.21 +0.1 754,499 - MPMX19_05228 0.21 -0.9 754,499 - MPMX19_05228 0.21 +0.2 754,499 - MPMX19_05228 0.21 -1.1 754,903 + MPMX19_05228 0.80 -1.0 754,903 + MPMX19_05228 0.80 +0.3 754,903 + MPMX19_05228 0.80 -1.1 754,903 + MPMX19_05228 0.80 +0.9 754,903 + MPMX19_05228 0.80 -0.8 754,903 + MPMX19_05228 0.80 -0.9 754,904 - MPMX19_05228 0.80 -0.1 754,904 - MPMX19_05228 0.80 +0.9 754,904 - MPMX19_05228 0.80 -0.6 754,904 - MPMX19_05228 0.80 -0.5 754,904 - MPMX19_05228 0.80 -0.5 754,936 + MPMX19_05228 0.85 -0.7 754,936 + MPMX19_05228 0.85 -0.5 754,936 + MPMX19_05228 0.85 -0.1 754,937 - MPMX19_05228 0.85 -0.5 755,095 + +0.8 755,157 + MPMX19_05229 0.19 +0.6 755,158 - MPMX19_05229 0.20 +1.2 755,158 - MPMX19_05229 0.20 +0.2 755,158 - MPMX19_05229 0.20 -1.4 755,478 + MPMX19_05229 0.71 +0.6 755,478 + MPMX19_05229 0.71 +1.1 755,478 + MPMX19_05229 0.71 +1.1 755,478 + MPMX19_05229 0.71 -1.4 755,478 + MPMX19_05229 0.71 -0.9 755,479 - MPMX19_05229 0.71 -1.4 755,479 - MPMX19_05229 0.71 -1.7 755,479 - MPMX19_05229 0.71 +0.5 755,479 - MPMX19_05229 0.71 -1.7 755,479 - MPMX19_05229 0.71 +0.1 755,479 - MPMX19_05229 0.71 +0.2 755,479 - MPMX19_05229 0.71 -0.3 755,479 - MPMX19_05229 0.71 +0.2 755,479 - MPMX19_05229 0.71 -1.2 755,479 - MPMX19_05229 0.71 -0.7 755,479 - MPMX19_05229 0.71 -1.2 755,696 - -0.9 755,710 - -0.8 755,738 + -0.8 755,738 + -0.5 755,738 + -0.7 755,738 + -0.8 755,738 + -1.1 755,738 + -0.8 755,738 + -2.1 755,739 - -0.7 755,739 - -3.4 755,739 - -1.1 755,739 - -0.9 755,739 - +0.9 755,764 + -0.7 755,765 - -0.2 755,765 - -0.5 755,890 + MPMX19_05230 0.10 -0.5 755,890 + MPMX19_05230 0.10 -0.4 755,890 + MPMX19_05230 0.10 -1.9 755,890 + MPMX19_05230 0.10 -0.1 755,890 + MPMX19_05230 0.10 -0.9 755,891 - MPMX19_05230 0.10 -0.5 755,891 - MPMX19_05230 0.10 +0.5 755,891 - MPMX19_05230 0.10 +0.1 755,891 - MPMX19_05230 0.10 +0.4 755,891 - MPMX19_05230 0.10 -0.3 756,052 + MPMX19_05230 0.23 -0.1 756,052 + MPMX19_05230 0.23 +0.5 756,052 + MPMX19_05230 0.23 -1.8 756,052 + MPMX19_05230 0.23 -0.7 756,052 + MPMX19_05230 0.23 -0.3 756,053 - MPMX19_05230 0.23 -0.3 756,053 - MPMX19_05230 0.23 -0.5 756,053 - MPMX19_05230 0.23 -0.2 756,053 - MPMX19_05230 0.23 -0.8 756,053 - MPMX19_05230 0.23 +0.6 756,349 + MPMX19_05230 0.47 -0.7 756,349 + MPMX19_05230 0.47 -0.6 756,349 + MPMX19_05230 0.47 -0.8 756,350 - MPMX19_05230 0.47 -0.1 756,350 - MPMX19_05230 0.47 -2.5 756,350 - MPMX19_05230 0.47 -0.4 756,583 + MPMX19_05230 0.66 -1.5 756,583 + MPMX19_05230 0.66 -0.7 756,584 - MPMX19_05230 0.66 -0.4 756,584 - MPMX19_05230 0.66 +0.9 756,584 - MPMX19_05230 0.66 +1.5 756,598 + MPMX19_05230 0.67 -0.7 756,598 + MPMX19_05230 0.67 +0.2 756,598 + MPMX19_05230 0.67 +0.5 756,598 + MPMX19_05230 0.67 -0.4 756,598 + MPMX19_05230 0.67 -2.1 756,598 + MPMX19_05230 0.67 +1.2 756,598 + MPMX19_05230 0.67 -1.4 756,598 + MPMX19_05230 0.67 +0.3 756,599 - MPMX19_05230 0.67 -0.6 756,599 - MPMX19_05230 0.67 -0.1 756,599 - MPMX19_05230 0.67 -0.9 756,599 - MPMX19_05230 0.67 -0.8 756,599 - MPMX19_05230 0.67 -1.1 756,599 - MPMX19_05230 0.67 -0.9 756,599 - MPMX19_05230 0.67 +0.7 756,599 - MPMX19_05230 0.67 -1.1 756,599 - MPMX19_05230 0.67 -0.1 756,599 - MPMX19_05230 0.67 +1.9
Or see this region's nucleotide sequence