Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04784 and MPMX19_04785 overlap by 35 nucleotides MPMX19_04785 and MPMX19_04786 overlap by 23 nucleotides
MPMX19_04784: MPMX19_04784 - N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase, at 180,488 to 182,758
_04784
MPMX19_04785: MPMX19_04785 - hypothetical protein, at 182,724 to 183,944
_04785
MPMX19_04786: MPMX19_04786 - Thymidylate kinase, at 183,922 to 185,208
_04786
Position (kb)
182
183
184 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 182.111 kb on + strand, within MPMX19_04784 at 182.111 kb on + strand, within MPMX19_04784 at 182.111 kb on + strand, within MPMX19_04784 at 182.111 kb on + strand, within MPMX19_04784 at 182.111 kb on + strand, within MPMX19_04784 at 182.111 kb on + strand, within MPMX19_04784 at 182.111 kb on + strand, within MPMX19_04784 at 182.111 kb on + strand, within MPMX19_04784 at 182.111 kb on + strand, within MPMX19_04784 at 182.111 kb on + strand, within MPMX19_04784 at 182.111 kb on + strand, within MPMX19_04784 at 182.112 kb on - strand, within MPMX19_04784 at 182.112 kb on - strand, within MPMX19_04784 at 182.112 kb on - strand, within MPMX19_04784 at 182.112 kb on - strand, within MPMX19_04784 at 182.112 kb on - strand, within MPMX19_04784 at 182.112 kb on - strand, within MPMX19_04784 at 182.112 kb on - strand, within MPMX19_04784 at 182.112 kb on - strand, within MPMX19_04784 at 182.112 kb on - strand, within MPMX19_04784 at 182.177 kb on + strand, within MPMX19_04784 at 182.178 kb on - strand, within MPMX19_04784 at 182.178 kb on - strand, within MPMX19_04784 at 182.178 kb on - strand, within MPMX19_04784 at 182.261 kb on + strand, within MPMX19_04784 at 182.261 kb on + strand, within MPMX19_04784 at 182.261 kb on + strand, within MPMX19_04784 at 182.261 kb on + strand, within MPMX19_04784 at 182.261 kb on + strand, within MPMX19_04784 at 182.262 kb on - strand, within MPMX19_04784 at 182.262 kb on - strand, within MPMX19_04784 at 182.262 kb on - strand, within MPMX19_04784 at 182.693 kb on + strand at 182.694 kb on - strand at 182.694 kb on - strand at 182.694 kb on - strand at 183.052 kb on + strand, within MPMX19_04785 at 183.052 kb on + strand, within MPMX19_04785 at 183.191 kb on + strand, within MPMX19_04785 at 183.191 kb on + strand, within MPMX19_04785 at 183.191 kb on + strand, within MPMX19_04785 at 183.191 kb on + strand, within MPMX19_04785 at 183.191 kb on + strand, within MPMX19_04785 at 183.192 kb on - strand, within MPMX19_04785 at 183.192 kb on - strand, within MPMX19_04785 at 183.192 kb on - strand, within MPMX19_04785 at 183.233 kb on + strand, within MPMX19_04785 at 183.337 kb on + strand, within MPMX19_04785 at 183.427 kb on + strand, within MPMX19_04785 at 183.427 kb on + strand, within MPMX19_04785 at 183.427 kb on + strand, within MPMX19_04785 at 183.427 kb on + strand, within MPMX19_04785 at 183.427 kb on + strand, within MPMX19_04785 at 183.427 kb on + strand, within MPMX19_04785 at 183.428 kb on - strand, within MPMX19_04785 at 183.428 kb on - strand, within MPMX19_04785 at 183.428 kb on - strand, within MPMX19_04785 at 183.478 kb on + strand, within MPMX19_04785 at 183.479 kb on - strand, within MPMX19_04785 at 183.479 kb on - strand, within MPMX19_04785 at 183.619 kb on + strand, within MPMX19_04785 at 183.619 kb on + strand, within MPMX19_04785 at 183.619 kb on + strand, within MPMX19_04785 at 183.619 kb on + strand, within MPMX19_04785 at 183.619 kb on + strand, within MPMX19_04785 at 183.619 kb on + strand, within MPMX19_04785 at 183.619 kb on + strand, within MPMX19_04785 at 183.619 kb on + strand, within MPMX19_04785 at 183.620 kb on - strand, within MPMX19_04785 at 183.620 kb on - strand, within MPMX19_04785 at 183.620 kb on - strand, within MPMX19_04785 at 183.620 kb on - strand, within MPMX19_04785 at 183.620 kb on - strand, within MPMX19_04785 at 183.757 kb on + strand, within MPMX19_04785 at 183.927 kb on + strand at 183.927 kb on + strand at 183.927 kb on + strand at 183.927 kb on + strand at 183.927 kb on + strand at 183.927 kb on + strand at 183.927 kb on + strand at 183.927 kb on + strand at 183.927 kb on + strand at 183.927 kb on + strand at 183.928 kb on - strand at 183.928 kb on - strand at 183.928 kb on - strand at 183.928 kb on - strand at 183.928 kb on - strand at 183.928 kb on - strand at 183.928 kb on - strand at 183.928 kb on - strand at 183.928 kb on - strand at 183.928 kb on - strand at 183.928 kb on - strand at 183.928 kb on - strand at 183.954 kb on + strand at 183.954 kb on + strand at 184.058 kb on + strand, within MPMX19_04786 at 184.058 kb on + strand, within MPMX19_04786 at 184.058 kb on + strand, within MPMX19_04786 at 184.058 kb on + strand, within MPMX19_04786 at 184.058 kb on + strand, within MPMX19_04786 at 184.058 kb on + strand, within MPMX19_04786 at 184.059 kb on - strand, within MPMX19_04786 at 184.059 kb on - strand, within MPMX19_04786 at 184.059 kb on - strand, within MPMX19_04786 at 184.059 kb on - strand, within MPMX19_04786 at 184.059 kb on - strand, within MPMX19_04786 at 184.059 kb on - strand, within MPMX19_04786 at 184.059 kb on - strand, within MPMX19_04786 at 184.059 kb on - strand, within MPMX19_04786 at 184.059 kb on - strand, within MPMX19_04786 at 184.059 kb on - strand, within MPMX19_04786 at 184.059 kb on - strand, within MPMX19_04786 at 184.244 kb on + strand, within MPMX19_04786 at 184.244 kb on + strand, within MPMX19_04786 at 184.244 kb on + strand, within MPMX19_04786 at 184.244 kb on + strand, within MPMX19_04786 at 184.244 kb on + strand, within MPMX19_04786 at 184.244 kb on + strand, within MPMX19_04786 at 184.244 kb on + strand, within MPMX19_04786 at 184.244 kb on + strand, within MPMX19_04786 at 184.244 kb on + strand, within MPMX19_04786 at 184.245 kb on - strand, within MPMX19_04786 at 184.245 kb on - strand, within MPMX19_04786 at 184.245 kb on - strand, within MPMX19_04786 at 184.245 kb on - strand, within MPMX19_04786 at 184.245 kb on - strand, within MPMX19_04786 at 184.245 kb on - strand, within MPMX19_04786 at 184.245 kb on - strand, within MPMX19_04786 at 184.313 kb on + strand, within MPMX19_04786 at 184.411 kb on + strand, within MPMX19_04786 at 184.412 kb on - strand, within MPMX19_04786 at 184.765 kb on + strand, within MPMX19_04786
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 182,111 + MPMX19_04784 0.71 -0.8 182,111 + MPMX19_04784 0.71 +1.0 182,111 + MPMX19_04784 0.71 +0.6 182,111 + MPMX19_04784 0.71 -1.1 182,111 + MPMX19_04784 0.71 -1.2 182,111 + MPMX19_04784 0.71 -0.6 182,111 + MPMX19_04784 0.71 -0.2 182,111 + MPMX19_04784 0.71 -0.8 182,111 + MPMX19_04784 0.71 +0.2 182,111 + MPMX19_04784 0.71 -1.6 182,111 + MPMX19_04784 0.71 +0.1 182,112 - MPMX19_04784 0.72 -0.8 182,112 - MPMX19_04784 0.72 -0.7 182,112 - MPMX19_04784 0.72 -1.3 182,112 - MPMX19_04784 0.72 -2.0 182,112 - MPMX19_04784 0.72 -0.1 182,112 - MPMX19_04784 0.72 -0.9 182,112 - MPMX19_04784 0.72 -0.2 182,112 - MPMX19_04784 0.72 -1.8 182,112 - MPMX19_04784 0.72 -2.0 182,177 + MPMX19_04784 0.74 +0.3 182,178 - MPMX19_04784 0.74 +1.6 182,178 - MPMX19_04784 0.74 -3.5 182,178 - MPMX19_04784 0.74 -0.8 182,261 + MPMX19_04784 0.78 -1.2 182,261 + MPMX19_04784 0.78 -0.7 182,261 + MPMX19_04784 0.78 -0.4 182,261 + MPMX19_04784 0.78 +0.6 182,261 + MPMX19_04784 0.78 -0.8 182,262 - MPMX19_04784 0.78 -0.6 182,262 - MPMX19_04784 0.78 +0.6 182,262 - MPMX19_04784 0.78 -1.6 182,693 + -2.9 182,694 - +0.1 182,694 - -0.0 182,694 - -0.0 183,052 + MPMX19_04785 0.27 +0.1 183,052 + MPMX19_04785 0.27 -0.3 183,191 + MPMX19_04785 0.38 +0.2 183,191 + MPMX19_04785 0.38 +0.2 183,191 + MPMX19_04785 0.38 -0.2 183,191 + MPMX19_04785 0.38 -0.4 183,191 + MPMX19_04785 0.38 -0.3 183,192 - MPMX19_04785 0.38 -0.5 183,192 - MPMX19_04785 0.38 -1.2 183,192 - MPMX19_04785 0.38 +1.6 183,233 + MPMX19_04785 0.42 -0.8 183,337 + MPMX19_04785 0.50 -0.6 183,427 + MPMX19_04785 0.58 -0.1 183,427 + MPMX19_04785 0.58 +1.2 183,427 + MPMX19_04785 0.58 -0.2 183,427 + MPMX19_04785 0.58 -0.0 183,427 + MPMX19_04785 0.58 -0.8 183,427 + MPMX19_04785 0.58 +0.9 183,428 - MPMX19_04785 0.58 -0.8 183,428 - MPMX19_04785 0.58 -0.6 183,428 - MPMX19_04785 0.58 -0.1 183,478 + MPMX19_04785 0.62 -0.2 183,479 - MPMX19_04785 0.62 +0.2 183,479 - MPMX19_04785 0.62 -1.1 183,619 + MPMX19_04785 0.73 -0.2 183,619 + MPMX19_04785 0.73 +0.3 183,619 + MPMX19_04785 0.73 +1.7 183,619 + MPMX19_04785 0.73 -0.6 183,619 + MPMX19_04785 0.73 -0.3 183,619 + MPMX19_04785 0.73 -0.1 183,619 + MPMX19_04785 0.73 +0.6 183,619 + MPMX19_04785 0.73 -0.9 183,620 - MPMX19_04785 0.73 -0.8 183,620 - MPMX19_04785 0.73 -1.6 183,620 - MPMX19_04785 0.73 -0.8 183,620 - MPMX19_04785 0.73 -0.2 183,620 - MPMX19_04785 0.73 -0.1 183,757 + MPMX19_04785 0.85 -0.1 183,927 + -0.4 183,927 + -0.7 183,927 + +0.2 183,927 + -0.6 183,927 + -0.7 183,927 + -1.0 183,927 + -0.4 183,927 + -1.5 183,927 + +0.7 183,927 + -0.2 183,928 - +1.0 183,928 - +0.2 183,928 - -1.8 183,928 - -0.8 183,928 - -0.7 183,928 - +0.4 183,928 - -1.2 183,928 - -1.4 183,928 - +0.6 183,928 - +0.2 183,928 - -0.4 183,928 - -0.6 183,954 + -0.3 183,954 + -1.8 184,058 + MPMX19_04786 0.11 -1.5 184,058 + MPMX19_04786 0.11 +1.6 184,058 + MPMX19_04786 0.11 +0.8 184,058 + MPMX19_04786 0.11 -0.0 184,058 + MPMX19_04786 0.11 +1.6 184,058 + MPMX19_04786 0.11 +0.1 184,059 - MPMX19_04786 0.11 -0.1 184,059 - MPMX19_04786 0.11 -0.0 184,059 - MPMX19_04786 0.11 -2.0 184,059 - MPMX19_04786 0.11 -1.0 184,059 - MPMX19_04786 0.11 -0.8 184,059 - MPMX19_04786 0.11 -0.9 184,059 - MPMX19_04786 0.11 -0.8 184,059 - MPMX19_04786 0.11 -0.2 184,059 - MPMX19_04786 0.11 +0.4 184,059 - MPMX19_04786 0.11 -0.2 184,059 - MPMX19_04786 0.11 -0.2 184,244 + MPMX19_04786 0.25 -2.1 184,244 + MPMX19_04786 0.25 -0.3 184,244 + MPMX19_04786 0.25 -1.9 184,244 + MPMX19_04786 0.25 -1.0 184,244 + MPMX19_04786 0.25 -0.6 184,244 + MPMX19_04786 0.25 +0.2 184,244 + MPMX19_04786 0.25 -0.7 184,244 + MPMX19_04786 0.25 -1.0 184,244 + MPMX19_04786 0.25 -0.7 184,245 - MPMX19_04786 0.25 -0.4 184,245 - MPMX19_04786 0.25 -2.3 184,245 - MPMX19_04786 0.25 -0.2 184,245 - MPMX19_04786 0.25 +0.2 184,245 - MPMX19_04786 0.25 -1.6 184,245 - MPMX19_04786 0.25 -1.0 184,245 - MPMX19_04786 0.25 +0.6 184,313 + MPMX19_04786 0.30 +0.2 184,411 + MPMX19_04786 0.38 -1.4 184,412 - MPMX19_04786 0.38 +0.2 184,765 + MPMX19_04786 0.66 -0.6
Or see this region's nucleotide sequence