Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04552 and MPMX19_04553 are separated by 47 nucleotides MPMX19_04553 and MPMX19_04554 are separated by 229 nucleotides MPMX19_04554 and MPMX19_04555 are separated by 410 nucleotides
MPMX19_04552: MPMX19_04552 - D-hydantoinase, at 928,537 to 929,961
_04552
MPMX19_04553: MPMX19_04553 - hypothetical protein, at 930,009 to 930,425
_04553
MPMX19_04554: MPMX19_04554 - Response regulator PleD, at 930,655 to 931,371
_04554
MPMX19_04555: MPMX19_04555 - Sensor histidine kinase RcsC, at 931,782 to 935,606
_04555
Position (kb) 930
931
932 Strain fitness (log2 ratio) -2
-1
0
1
2 at 929.680 kb on + strand, within MPMX19_04552 at 929.680 kb on + strand, within MPMX19_04552 at 929.680 kb on + strand, within MPMX19_04552 at 929.680 kb on + strand, within MPMX19_04552 at 929.680 kb on + strand, within MPMX19_04552 at 929.681 kb on - strand, within MPMX19_04552 at 929.681 kb on - strand, within MPMX19_04552 at 929.681 kb on - strand, within MPMX19_04552 at 929.681 kb on - strand, within MPMX19_04552 at 929.681 kb on - strand, within MPMX19_04552 at 929.681 kb on - strand, within MPMX19_04552 at 929.681 kb on - strand, within MPMX19_04552 at 929.681 kb on - strand, within MPMX19_04552 at 929.740 kb on + strand, within MPMX19_04552 at 929.740 kb on + strand, within MPMX19_04552 at 929.740 kb on + strand, within MPMX19_04552 at 929.740 kb on + strand, within MPMX19_04552 at 929.740 kb on + strand, within MPMX19_04552 at 929.741 kb on - strand, within MPMX19_04552 at 929.741 kb on - strand, within MPMX19_04552 at 929.797 kb on + strand, within MPMX19_04552 at 929.797 kb on + strand, within MPMX19_04552 at 929.797 kb on + strand, within MPMX19_04552 at 929.797 kb on + strand, within MPMX19_04552 at 929.798 kb on - strand, within MPMX19_04552 at 929.798 kb on - strand, within MPMX19_04552 at 929.798 kb on - strand, within MPMX19_04552 at 929.798 kb on - strand, within MPMX19_04552 at 929.806 kb on + strand, within MPMX19_04552 at 930.238 kb on - strand, within MPMX19_04553 at 930.238 kb on - strand, within MPMX19_04553 at 930.276 kb on + strand, within MPMX19_04553 at 930.276 kb on + strand, within MPMX19_04553 at 930.277 kb on - strand, within MPMX19_04553 at 930.563 kb on + strand at 930.563 kb on + strand at 930.564 kb on - strand at 930.564 kb on - strand at 930.564 kb on - strand at 930.656 kb on + strand at 930.656 kb on + strand at 930.656 kb on + strand at 930.656 kb on + strand at 930.656 kb on + strand at 930.657 kb on - strand at 930.657 kb on - strand at 930.657 kb on - strand at 930.701 kb on + strand at 930.701 kb on + strand at 930.701 kb on + strand at 930.702 kb on - strand at 930.702 kb on - strand at 930.702 kb on - strand at 930.766 kb on + strand, within MPMX19_04554 at 930.766 kb on + strand, within MPMX19_04554 at 930.766 kb on + strand, within MPMX19_04554 at 930.767 kb on - strand, within MPMX19_04554 at 930.767 kb on - strand, within MPMX19_04554 at 930.860 kb on + strand, within MPMX19_04554 at 930.861 kb on - strand, within MPMX19_04554 at 930.861 kb on - strand, within MPMX19_04554 at 930.861 kb on - strand, within MPMX19_04554 at 930.861 kb on - strand, within MPMX19_04554 at 930.932 kb on - strand, within MPMX19_04554 at 930.996 kb on + strand, within MPMX19_04554 at 930.996 kb on + strand, within MPMX19_04554 at 930.996 kb on + strand, within MPMX19_04554 at 930.997 kb on - strand, within MPMX19_04554 at 930.997 kb on - strand, within MPMX19_04554 at 930.997 kb on - strand, within MPMX19_04554 at 930.997 kb on - strand, within MPMX19_04554 at 930.997 kb on - strand, within MPMX19_04554 at 930.997 kb on - strand, within MPMX19_04554 at 931.310 kb on + strand at 931.310 kb on + strand at 931.310 kb on + strand at 931.503 kb on + strand at 931.504 kb on - strand at 931.530 kb on + strand at 931.530 kb on + strand at 931.530 kb on + strand at 931.530 kb on + strand at 931.531 kb on - strand at 931.531 kb on - strand at 931.532 kb on + strand at 931.532 kb on + strand at 931.532 kb on + strand at 931.533 kb on - strand at 931.533 kb on - strand at 931.533 kb on - strand at 931.570 kb on + strand at 931.570 kb on + strand at 931.570 kb on + strand at 931.573 kb on + strand at 931.573 kb on + strand at 931.573 kb on + strand at 931.574 kb on - strand at 931.675 kb on + strand at 931.900 kb on + strand at 931.900 kb on + strand at 931.900 kb on + strand at 931.900 kb on + strand at 931.900 kb on + strand at 931.900 kb on + strand at 931.900 kb on + strand at 931.900 kb on + strand at 931.900 kb on + strand at 931.901 kb on - strand at 931.901 kb on - strand at 931.901 kb on - strand at 931.901 kb on - strand at 931.901 kb on - strand at 931.901 kb on - strand at 932.293 kb on + strand, within MPMX19_04555 at 932.294 kb on - strand, within MPMX19_04555 at 932.294 kb on - strand, within MPMX19_04555
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 929,680 + MPMX19_04552 0.80 -1.1 929,680 + MPMX19_04552 0.80 +2.0 929,680 + MPMX19_04552 0.80 -1.3 929,680 + MPMX19_04552 0.80 -0.9 929,680 + MPMX19_04552 0.80 +0.2 929,681 - MPMX19_04552 0.80 -0.1 929,681 - MPMX19_04552 0.80 -0.5 929,681 - MPMX19_04552 0.80 -0.8 929,681 - MPMX19_04552 0.80 -1.1 929,681 - MPMX19_04552 0.80 -1.2 929,681 - MPMX19_04552 0.80 -0.9 929,681 - MPMX19_04552 0.80 +1.2 929,681 - MPMX19_04552 0.80 -1.3 929,740 + MPMX19_04552 0.84 +0.1 929,740 + MPMX19_04552 0.84 -0.5 929,740 + MPMX19_04552 0.84 -0.1 929,740 + MPMX19_04552 0.84 -1.6 929,740 + MPMX19_04552 0.84 -0.9 929,741 - MPMX19_04552 0.84 +0.2 929,741 - MPMX19_04552 0.84 +0.6 929,797 + MPMX19_04552 0.88 -0.4 929,797 + MPMX19_04552 0.88 -1.9 929,797 + MPMX19_04552 0.88 -0.4 929,797 + MPMX19_04552 0.88 -0.2 929,798 - MPMX19_04552 0.88 -0.8 929,798 - MPMX19_04552 0.88 -0.9 929,798 - MPMX19_04552 0.88 -0.5 929,798 - MPMX19_04552 0.88 -0.9 929,806 + MPMX19_04552 0.89 +0.9 930,238 - MPMX19_04553 0.55 -0.2 930,238 - MPMX19_04553 0.55 -0.3 930,276 + MPMX19_04553 0.64 +1.1 930,276 + MPMX19_04553 0.64 +0.6 930,277 - MPMX19_04553 0.64 -0.3 930,563 + +0.4 930,563 + -0.8 930,564 - -0.1 930,564 - -0.3 930,564 - -0.1 930,656 + -1.2 930,656 + +0.2 930,656 + -2.1 930,656 + -1.7 930,656 + +1.1 930,657 - -0.6 930,657 - -0.7 930,657 - -1.0 930,701 + -1.1 930,701 + -0.6 930,701 + +0.2 930,702 - -0.6 930,702 - +0.4 930,702 - -0.3 930,766 + MPMX19_04554 0.15 -0.9 930,766 + MPMX19_04554 0.15 -0.8 930,766 + MPMX19_04554 0.15 -0.1 930,767 - MPMX19_04554 0.16 -0.6 930,767 - MPMX19_04554 0.16 +0.8 930,860 + MPMX19_04554 0.29 -0.4 930,861 - MPMX19_04554 0.29 +1.4 930,861 - MPMX19_04554 0.29 -1.1 930,861 - MPMX19_04554 0.29 -0.4 930,861 - MPMX19_04554 0.29 -2.3 930,932 - MPMX19_04554 0.39 +0.1 930,996 + MPMX19_04554 0.48 +1.4 930,996 + MPMX19_04554 0.48 -0.2 930,996 + MPMX19_04554 0.48 -1.5 930,997 - MPMX19_04554 0.48 -1.2 930,997 - MPMX19_04554 0.48 -1.3 930,997 - MPMX19_04554 0.48 -0.2 930,997 - MPMX19_04554 0.48 -0.2 930,997 - MPMX19_04554 0.48 +0.1 930,997 - MPMX19_04554 0.48 -0.2 931,310 + -0.9 931,310 + -1.9 931,310 + -1.9 931,503 + -1.1 931,504 - +0.8 931,530 + -1.8 931,530 + -0.2 931,530 + +0.3 931,530 + -1.5 931,531 - +1.4 931,531 - -0.6 931,532 + +0.7 931,532 + -0.9 931,532 + -1.1 931,533 - -0.7 931,533 - -1.9 931,533 - +0.4 931,570 + -1.3 931,570 + -0.2 931,570 + +1.8 931,573 + +0.2 931,573 + -0.9 931,573 + -0.9 931,574 - -0.8 931,675 + +0.4 931,900 + -1.1 931,900 + -0.9 931,900 + +0.4 931,900 + -0.6 931,900 + +0.1 931,900 + +0.4 931,900 + +1.4 931,900 + +1.0 931,900 + -0.9 931,901 - +0.2 931,901 - -0.8 931,901 - -0.9 931,901 - +1.1 931,901 - -0.4 931,901 - -1.9 932,293 + MPMX19_04555 0.13 -2.2 932,294 - MPMX19_04555 0.13 -0.4 932,294 - MPMX19_04555 0.13 -0.6
Or see this region's nucleotide sequence