Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04445

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_04444 and MPMX19_04445 are separated by 8 nucleotidesMPMX19_04445 and MPMX19_04446 are separated by 69 nucleotides MPMX19_04444: MPMX19_04444 - hypothetical protein, at 811,752 to 812,669 _04444 MPMX19_04445: MPMX19_04445 - Uric acid degradation bifunctional protein, at 812,678 to 813,190 _04445 MPMX19_04446: MPMX19_04446 - NAD(P) transhydrogenase subunit beta, at 813,260 to 814,654 _04446 Position (kb) 812 813 814Strain fitness (log2 ratio) -3 -2 -1 0 1at 811.705 kb on + strandat 811.705 kb on + strandat 811.705 kb on + strandat 811.705 kb on + strandat 811.706 kb on - strandat 811.706 kb on - strandat 811.706 kb on - strandat 811.706 kb on - strandat 811.706 kb on - strandat 811.710 kb on + strandat 811.710 kb on + strandat 811.710 kb on + strandat 811.710 kb on + strandat 811.710 kb on + strandat 811.710 kb on + strandat 811.711 kb on - strandat 811.711 kb on - strandat 811.711 kb on - strandat 811.711 kb on - strandat 811.711 kb on - strandat 811.767 kb on + strandat 811.768 kb on - strandat 811.768 kb on - strandat 811.788 kb on + strandat 811.789 kb on - strandat 811.857 kb on + strand, within MPMX19_04444at 811.857 kb on + strand, within MPMX19_04444at 811.857 kb on + strand, within MPMX19_04444at 811.857 kb on + strand, within MPMX19_04444at 811.857 kb on + strand, within MPMX19_04444at 811.857 kb on + strand, within MPMX19_04444at 811.858 kb on + strand, within MPMX19_04444at 811.858 kb on - strand, within MPMX19_04444at 811.858 kb on - strand, within MPMX19_04444at 811.858 kb on - strand, within MPMX19_04444at 811.858 kb on - strand, within MPMX19_04444at 811.858 kb on - strand, within MPMX19_04444at 811.858 kb on - strand, within MPMX19_04444at 811.977 kb on + strand, within MPMX19_04444at 811.977 kb on + strand, within MPMX19_04444at 811.977 kb on + strand, within MPMX19_04444at 811.977 kb on + strand, within MPMX19_04444at 811.977 kb on + strand, within MPMX19_04444at 811.978 kb on - strand, within MPMX19_04444at 811.978 kb on - strand, within MPMX19_04444at 811.978 kb on - strand, within MPMX19_04444at 811.983 kb on + strand, within MPMX19_04444at 811.983 kb on + strand, within MPMX19_04444at 811.984 kb on - strand, within MPMX19_04444at 812.052 kb on + strand, within MPMX19_04444at 812.052 kb on + strand, within MPMX19_04444at 812.052 kb on + strand, within MPMX19_04444at 812.052 kb on + strand, within MPMX19_04444at 812.053 kb on - strand, within MPMX19_04444at 812.053 kb on - strand, within MPMX19_04444at 812.053 kb on - strand, within MPMX19_04444at 812.053 kb on - strand, within MPMX19_04444at 812.053 kb on - strand, within MPMX19_04444at 812.151 kb on + strand, within MPMX19_04444at 812.151 kb on + strand, within MPMX19_04444at 812.152 kb on - strand, within MPMX19_04444at 812.152 kb on - strand, within MPMX19_04444at 812.152 kb on - strand, within MPMX19_04444at 812.152 kb on - strand, within MPMX19_04444at 812.186 kb on + strand, within MPMX19_04444at 812.186 kb on + strand, within MPMX19_04444at 812.186 kb on + strand, within MPMX19_04444at 812.186 kb on + strand, within MPMX19_04444at 812.186 kb on + strand, within MPMX19_04444at 812.186 kb on + strand, within MPMX19_04444at 812.186 kb on + strand, within MPMX19_04444at 812.186 kb on + strand, within MPMX19_04444at 812.186 kb on + strand, within MPMX19_04444at 812.186 kb on + strand, within MPMX19_04444at 812.186 kb on + strand, within MPMX19_04444at 812.186 kb on + strand, within MPMX19_04444at 812.186 kb on + strand, within MPMX19_04444at 812.186 kb on + strand, within MPMX19_04444at 812.186 kb on + strand, within MPMX19_04444at 812.186 kb on + strand, within MPMX19_04444at 812.186 kb on + strand, within MPMX19_04444at 812.186 kb on + strand, within MPMX19_04444at 812.187 kb on - strand, within MPMX19_04444at 812.187 kb on - strand, within MPMX19_04444at 812.187 kb on - strand, within MPMX19_04444at 812.187 kb on - strand, within MPMX19_04444at 812.187 kb on - strand, within MPMX19_04444at 812.187 kb on - strand, within MPMX19_04444at 812.187 kb on - strand, within MPMX19_04444at 812.187 kb on - strand, within MPMX19_04444at 812.187 kb on - strand, within MPMX19_04444at 812.187 kb on - strand, within MPMX19_04444at 812.187 kb on - strand, within MPMX19_04444at 812.187 kb on - strand, within MPMX19_04444at 812.187 kb on - strand, within MPMX19_04444at 812.187 kb on - strand, within MPMX19_04444at 812.187 kb on - strand, within MPMX19_04444at 812.187 kb on - strand, within MPMX19_04444at 812.187 kb on - strand, within MPMX19_04444at 812.187 kb on - strand, within MPMX19_04444at 812.187 kb on - strand, within MPMX19_04444at 812.187 kb on - strand, within MPMX19_04444at 812.187 kb on - strand, within MPMX19_04444at 812.187 kb on - strand, within MPMX19_04444at 812.244 kb on + strand, within MPMX19_04444at 812.244 kb on + strand, within MPMX19_04444at 812.245 kb on - strand, within MPMX19_04444at 812.245 kb on - strand, within MPMX19_04444at 812.245 kb on - strand, within MPMX19_04444at 812.245 kb on - strand, within MPMX19_04444at 812.245 kb on - strand, within MPMX19_04444at 812.245 kb on - strand, within MPMX19_04444at 812.245 kb on - strand, within MPMX19_04444at 812.304 kb on + strand, within MPMX19_04444at 812.304 kb on + strand, within MPMX19_04444at 812.304 kb on + strand, within MPMX19_04444at 812.304 kb on + strand, within MPMX19_04444at 812.304 kb on + strand, within MPMX19_04444at 812.304 kb on + strand, within MPMX19_04444at 812.305 kb on - strand, within MPMX19_04444at 812.305 kb on - strand, within MPMX19_04444at 812.305 kb on - strand, within MPMX19_04444at 812.305 kb on - strand, within MPMX19_04444at 812.305 kb on - strand, within MPMX19_04444at 812.305 kb on - strand, within MPMX19_04444at 812.305 kb on - strand, within MPMX19_04444at 812.319 kb on + strand, within MPMX19_04444at 812.319 kb on + strand, within MPMX19_04444at 812.337 kb on + strand, within MPMX19_04444at 812.337 kb on + strand, within MPMX19_04444at 812.337 kb on + strand, within MPMX19_04444at 812.338 kb on - strand, within MPMX19_04444at 812.379 kb on + strand, within MPMX19_04444at 812.379 kb on + strand, within MPMX19_04444at 812.379 kb on + strand, within MPMX19_04444at 812.379 kb on + strand, within MPMX19_04444at 812.451 kb on + strand, within MPMX19_04444at 812.452 kb on - strand, within MPMX19_04444at 812.452 kb on - strand, within MPMX19_04444at 812.478 kb on + strand, within MPMX19_04444at 812.478 kb on + strand, within MPMX19_04444at 812.479 kb on - strand, within MPMX19_04444at 812.479 kb on - strand, within MPMX19_04444at 812.479 kb on - strand, within MPMX19_04444at 812.479 kb on - strand, within MPMX19_04444at 812.580 kb on + strandat 812.580 kb on + strandat 812.580 kb on + strandat 812.580 kb on + strandat 812.580 kb on + strandat 812.580 kb on + strandat 812.580 kb on + strandat 812.580 kb on + strandat 812.580 kb on + strandat 812.580 kb on + strandat 812.581 kb on - strandat 812.581 kb on - strandat 812.581 kb on - strandat 812.581 kb on - strandat 812.581 kb on - strandat 812.581 kb on - strandat 812.581 kb on - strandat 812.581 kb on - strandat 812.581 kb on - strandat 812.581 kb on - strandat 812.581 kb on - strandat 812.581 kb on - strandat 812.581 kb on - strandat 812.581 kb on - strandat 812.655 kb on + strandat 812.655 kb on + strandat 812.655 kb on + strandat 812.655 kb on + strandat 812.655 kb on + strandat 812.655 kb on + strandat 812.655 kb on + strandat 812.655 kb on + strandat 812.655 kb on + strandat 812.655 kb on + strandat 812.656 kb on - strandat 812.656 kb on - strandat 812.656 kb on - strandat 812.656 kb on - strandat 812.656 kb on - strandat 812.684 kb on + strandat 812.684 kb on + strandat 812.685 kb on - strandat 812.685 kb on - strandat 812.685 kb on - strandat 813.146 kb on + strandat 813.146 kb on + strandat 813.146 kb on + strandat 813.146 kb on + strandat 813.146 kb on + strandat 813.146 kb on + strandat 813.146 kb on + strandat 813.146 kb on + strandat 813.147 kb on - strandat 813.147 kb on - strandat 813.147 kb on - strandat 813.202 kb on + strandat 813.248 kb on + strandat 813.248 kb on + strandat 813.435 kb on + strand, within MPMX19_04446at 813.435 kb on + strand, within MPMX19_04446at 813.435 kb on + strand, within MPMX19_04446at 813.435 kb on + strand, within MPMX19_04446at 813.435 kb on + strand, within MPMX19_04446at 813.435 kb on + strand, within MPMX19_04446at 813.435 kb on + strand, within MPMX19_04446at 813.435 kb on + strand, within MPMX19_04446at 813.435 kb on + strand, within MPMX19_04446at 813.435 kb on + strand, within MPMX19_04446at 813.435 kb on + strand, within MPMX19_04446at 813.435 kb on + strand, within MPMX19_04446at 813.435 kb on + strand, within MPMX19_04446at 813.435 kb on + strand, within MPMX19_04446at 813.435 kb on + strand, within MPMX19_04446at 813.436 kb on - strand, within MPMX19_04446at 813.436 kb on - strand, within MPMX19_04446at 813.436 kb on - strand, within MPMX19_04446at 813.436 kb on - strand, within MPMX19_04446at 813.436 kb on - strand, within MPMX19_04446at 813.436 kb on - strand, within MPMX19_04446at 813.436 kb on - strand, within MPMX19_04446at 813.436 kb on - strand, within MPMX19_04446at 813.436 kb on - strand, within MPMX19_04446at 813.436 kb on - strand, within MPMX19_04446at 813.436 kb on - strand, within MPMX19_04446at 813.436 kb on - strand, within MPMX19_04446at 813.630 kb on + strand, within MPMX19_04446at 813.630 kb on + strand, within MPMX19_04446at 813.630 kb on + strand, within MPMX19_04446at 813.630 kb on + strand, within MPMX19_04446at 813.630 kb on + strand, within MPMX19_04446at 813.630 kb on + strand, within MPMX19_04446at 813.630 kb on + strand, within MPMX19_04446at 813.754 kb on - strand, within MPMX19_04446at 813.754 kb on - strand, within MPMX19_04446at 813.754 kb on - strand, within MPMX19_04446at 813.754 kb on - strand, within MPMX19_04446at 813.754 kb on - strand, within MPMX19_04446at 813.754 kb on - strand, within MPMX19_04446at 813.754 kb on - strand, within MPMX19_04446at 813.754 kb on - strand, within MPMX19_04446at 813.754 kb on - strand, within MPMX19_04446at 813.754 kb on - strand, within MPMX19_04446at 813.754 kb on - strand, within MPMX19_04446at 813.754 kb on - strand, within MPMX19_04446at 813.754 kb on - strand, within MPMX19_04446at 813.991 kb on - strand, within MPMX19_04446at 813.991 kb on - strand, within MPMX19_04446at 813.991 kb on - strand, within MPMX19_04446at 813.991 kb on - strand, within MPMX19_04446at 813.991 kb on - strand, within MPMX19_04446at 813.991 kb on - strand, within MPMX19_04446at 813.991 kb on - strand, within MPMX19_04446at 813.991 kb on - strand, within MPMX19_04446at 813.991 kb on - strand, within MPMX19_04446

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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811,705 + -2.2
811,705 + -1.1
811,705 + -1.2
811,705 + -1.4
811,706 - -0.6
811,706 - -1.6
811,706 - -1.1
811,706 - -0.3
811,706 - +0.4
811,710 + -0.2
811,710 + -1.9
811,710 + -1.3
811,710 + -0.9
811,710 + -0.8
811,710 + +0.6
811,711 - -0.6
811,711 - -0.4
811,711 - -0.9
811,711 - -1.1
811,711 - -0.3
811,767 + -0.9
811,768 - -1.4
811,768 - -0.2
811,788 + -1.7
811,789 - -1.2
811,857 + MPMX19_04444 0.11 -1.9
811,857 + MPMX19_04444 0.11 +1.2
811,857 + MPMX19_04444 0.11 +1.4
811,857 + MPMX19_04444 0.11 -0.8
811,857 + MPMX19_04444 0.11 +0.3
811,857 + MPMX19_04444 0.11 -0.8
811,858 + MPMX19_04444 0.12 -0.4
811,858 - MPMX19_04444 0.12 -0.9
811,858 - MPMX19_04444 0.12 +0.6
811,858 - MPMX19_04444 0.12 -0.2
811,858 - MPMX19_04444 0.12 +0.2
811,858 - MPMX19_04444 0.12 -0.4
811,858 - MPMX19_04444 0.12 -1.1
811,977 + MPMX19_04444 0.25 +0.8
811,977 + MPMX19_04444 0.25 +0.8
811,977 + MPMX19_04444 0.25 -0.7
811,977 + MPMX19_04444 0.25 -2.1
811,977 + MPMX19_04444 0.25 -1.2
811,978 - MPMX19_04444 0.25 +0.3
811,978 - MPMX19_04444 0.25 -0.1
811,978 - MPMX19_04444 0.25 -0.1
811,983 + MPMX19_04444 0.25 -1.9
811,983 + MPMX19_04444 0.25 +0.4
811,984 - MPMX19_04444 0.25 -0.8
812,052 + MPMX19_04444 0.33 -1.9
812,052 + MPMX19_04444 0.33 -1.3
812,052 + MPMX19_04444 0.33 +0.1
812,052 + MPMX19_04444 0.33 -1.3
812,053 - MPMX19_04444 0.33 +0.2
812,053 - MPMX19_04444 0.33 +0.2
812,053 - MPMX19_04444 0.33 +0.4
812,053 - MPMX19_04444 0.33 -0.6
812,053 - MPMX19_04444 0.33 -2.0
812,151 + MPMX19_04444 0.43 +1.0
812,151 + MPMX19_04444 0.43 +0.1
812,152 - MPMX19_04444 0.44 +0.4
812,152 - MPMX19_04444 0.44 -0.0
812,152 - MPMX19_04444 0.44 +1.6
812,152 - MPMX19_04444 0.44 -0.6
812,186 + MPMX19_04444 0.47 -1.0
812,186 + MPMX19_04444 0.47 -0.9
812,186 + MPMX19_04444 0.47 +0.8
812,186 + MPMX19_04444 0.47 -1.6
812,186 + MPMX19_04444 0.47 -0.4
812,186 + MPMX19_04444 0.47 +0.5
812,186 + MPMX19_04444 0.47 -2.6
812,186 + MPMX19_04444 0.47 -0.2
812,186 + MPMX19_04444 0.47 +0.2
812,186 + MPMX19_04444 0.47 -1.3
812,186 + MPMX19_04444 0.47 +0.1
812,186 + MPMX19_04444 0.47 -1.2
812,186 + MPMX19_04444 0.47 +0.8
812,186 + MPMX19_04444 0.47 +0.2
812,186 + MPMX19_04444 0.47 -0.6
812,186 + MPMX19_04444 0.47 -0.2
812,186 + MPMX19_04444 0.47 +0.6
812,186 + MPMX19_04444 0.47 +0.2
812,187 - MPMX19_04444 0.47 +0.2
812,187 - MPMX19_04444 0.47 +0.8
812,187 - MPMX19_04444 0.47 -0.8
812,187 - MPMX19_04444 0.47 -0.5
812,187 - MPMX19_04444 0.47 +1.2
812,187 - MPMX19_04444 0.47 -1.1
812,187 - MPMX19_04444 0.47 -0.2
812,187 - MPMX19_04444 0.47 +0.2
812,187 - MPMX19_04444 0.47 -0.2
812,187 - MPMX19_04444 0.47 +1.3
812,187 - MPMX19_04444 0.47 -1.1
812,187 - MPMX19_04444 0.47 -1.6
812,187 - MPMX19_04444 0.47 +1.1
812,187 - MPMX19_04444 0.47 -1.4
812,187 - MPMX19_04444 0.47 -0.6
812,187 - MPMX19_04444 0.47 -1.1
812,187 - MPMX19_04444 0.47 +0.6
812,187 - MPMX19_04444 0.47 -0.8
812,187 - MPMX19_04444 0.47 +0.8
812,187 - MPMX19_04444 0.47 +0.6
812,187 - MPMX19_04444 0.47 -1.3
812,187 - MPMX19_04444 0.47 -0.9
812,244 + MPMX19_04444 0.54 -0.2
812,244 + MPMX19_04444 0.54 -0.1
812,245 - MPMX19_04444 0.54 -1.3
812,245 - MPMX19_04444 0.54 -0.5
812,245 - MPMX19_04444 0.54 -0.9
812,245 - MPMX19_04444 0.54 +0.1
812,245 - MPMX19_04444 0.54 -0.2
812,245 - MPMX19_04444 0.54 -1.9
812,245 - MPMX19_04444 0.54 +0.1
812,304 + MPMX19_04444 0.60 +0.8
812,304 + MPMX19_04444 0.60 -1.0
812,304 + MPMX19_04444 0.60 +0.1
812,304 + MPMX19_04444 0.60 +0.6
812,304 + MPMX19_04444 0.60 +0.2
812,304 + MPMX19_04444 0.60 -0.1
812,305 - MPMX19_04444 0.60 -0.3
812,305 - MPMX19_04444 0.60 -0.9
812,305 - MPMX19_04444 0.60 -0.8
812,305 - MPMX19_04444 0.60 -1.4
812,305 - MPMX19_04444 0.60 -1.3
812,305 - MPMX19_04444 0.60 -0.2
812,305 - MPMX19_04444 0.60 -2.0
812,319 + MPMX19_04444 0.62 -1.3
812,319 + MPMX19_04444 0.62 -0.5
812,337 + MPMX19_04444 0.64 +0.1
812,337 + MPMX19_04444 0.64 -0.2
812,337 + MPMX19_04444 0.64 +0.5
812,338 - MPMX19_04444 0.64 +0.2
812,379 + MPMX19_04444 0.68 -0.2
812,379 + MPMX19_04444 0.68 +0.1
812,379 + MPMX19_04444 0.68 -0.1
812,379 + MPMX19_04444 0.68 -1.2
812,451 + MPMX19_04444 0.76 -0.3
812,452 - MPMX19_04444 0.76 -1.5
812,452 - MPMX19_04444 0.76 -0.5
812,478 + MPMX19_04444 0.79 -1.3
812,478 + MPMX19_04444 0.79 +0.4
812,479 - MPMX19_04444 0.79 -0.8
812,479 - MPMX19_04444 0.79 -0.1
812,479 - MPMX19_04444 0.79 +0.1
812,479 - MPMX19_04444 0.79 -0.8
812,580 + -0.9
812,580 + -1.3
812,580 + -2.5
812,580 + -2.4
812,580 + -1.5
812,580 + -0.2
812,580 + +0.4
812,580 + +0.6
812,580 + -0.4
812,580 + +0.2
812,581 - +0.1
812,581 - -0.2
812,581 - -0.4
812,581 - -0.9
812,581 - -0.6
812,581 - -0.4
812,581 - -1.1
812,581 - -1.5
812,581 - -0.2
812,581 - -1.6
812,581 - -0.3
812,581 - +0.6
812,581 - -2.1
812,581 - -1.0
812,655 + -0.3
812,655 + -1.1
812,655 + -1.5
812,655 + -1.3
812,655 + -0.4
812,655 + -1.6
812,655 + -1.3
812,655 + -1.4
812,655 + -0.6
812,655 + -1.4
812,656 - -1.1
812,656 - -1.9
812,656 - +0.1
812,656 - +1.4
812,656 - -1.3
812,684 + -1.2
812,684 + -0.5
812,685 - -1.3
812,685 - -0.9
812,685 - +1.0
813,146 + -1.4
813,146 + -0.4
813,146 + -0.1
813,146 + -0.9
813,146 + -0.4
813,146 + -0.4
813,146 + -1.1
813,146 + -2.0
813,147 - -1.2
813,147 - -0.8
813,147 - -0.6
813,202 + -2.7
813,248 + +0.8
813,248 + +0.8
813,435 + MPMX19_04446 0.13 -0.3
813,435 + MPMX19_04446 0.13 -1.4
813,435 + MPMX19_04446 0.13 -1.3
813,435 + MPMX19_04446 0.13 +0.6
813,435 + MPMX19_04446 0.13 -0.0
813,435 + MPMX19_04446 0.13 +0.8
813,435 + MPMX19_04446 0.13 -0.8
813,435 + MPMX19_04446 0.13 +0.4
813,435 + MPMX19_04446 0.13 -1.7
813,435 + MPMX19_04446 0.13 -0.8
813,435 + MPMX19_04446 0.13 -0.5
813,435 + MPMX19_04446 0.13 +0.7
813,435 + MPMX19_04446 0.13 +0.1
813,435 + MPMX19_04446 0.13 -1.1
813,435 + MPMX19_04446 0.13 -0.4
813,436 - MPMX19_04446 0.13 -1.5
813,436 - MPMX19_04446 0.13 -0.7
813,436 - MPMX19_04446 0.13 -1.2
813,436 - MPMX19_04446 0.13 +0.4
813,436 - MPMX19_04446 0.13 -2.3
813,436 - MPMX19_04446 0.13 -3.0
813,436 - MPMX19_04446 0.13 -1.3
813,436 - MPMX19_04446 0.13 -0.4
813,436 - MPMX19_04446 0.13 -0.6
813,436 - MPMX19_04446 0.13 -0.2
813,436 - MPMX19_04446 0.13 +0.1
813,436 - MPMX19_04446 0.13 +0.4
813,630 + MPMX19_04446 0.27 -0.9
813,630 + MPMX19_04446 0.27 -1.1
813,630 + MPMX19_04446 0.27 -0.4
813,630 + MPMX19_04446 0.27 -0.5
813,630 + MPMX19_04446 0.27 +1.1
813,630 + MPMX19_04446 0.27 -0.6
813,630 + MPMX19_04446 0.27 +0.6
813,754 - MPMX19_04446 0.35 -1.2
813,754 - MPMX19_04446 0.35 -3.4
813,754 - MPMX19_04446 0.35 -1.1
813,754 - MPMX19_04446 0.35 -0.6
813,754 - MPMX19_04446 0.35 -1.8
813,754 - MPMX19_04446 0.35 +0.1
813,754 - MPMX19_04446 0.35 +0.8
813,754 - MPMX19_04446 0.35 -0.2
813,754 - MPMX19_04446 0.35 +0.4
813,754 - MPMX19_04446 0.35 -1.4
813,754 - MPMX19_04446 0.35 -1.0
813,754 - MPMX19_04446 0.35 -0.9
813,754 - MPMX19_04446 0.35 +0.3
813,991 - MPMX19_04446 0.52 +0.5
813,991 - MPMX19_04446 0.52 -1.7
813,991 - MPMX19_04446 0.52 -1.8
813,991 - MPMX19_04446 0.52 -1.7
813,991 - MPMX19_04446 0.52 +0.5
813,991 - MPMX19_04446 0.52 -0.8
813,991 - MPMX19_04446 0.52 -0.8
813,991 - MPMX19_04446 0.52 -0.7
813,991 - MPMX19_04446 0.52 -0.4

Or see this region's nucleotide sequence