Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03725 and MPMX19_03726 are separated by 261 nucleotides MPMX19_03726 and MPMX19_03727 are separated by 7 nucleotides
MPMX19_03725: MPMX19_03725 - Hercynine oxygenase, at 1,168,131 to 1,170,932
_03725
MPMX19_03726: MPMX19_03726 - hypothetical protein, at 1,171,194 to 1,173,113
_03726
MPMX19_03727: MPMX19_03727 - hypothetical protein, at 1,173,121 to 1,174,239
_03727
Position (kb)
1171
1172
1173
1174 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1170.248 kb on + strand, within MPMX19_03725 at 1170.248 kb on + strand, within MPMX19_03725 at 1170.248 kb on + strand, within MPMX19_03725 at 1170.249 kb on - strand, within MPMX19_03725 at 1170.249 kb on - strand, within MPMX19_03725 at 1170.484 kb on + strand, within MPMX19_03725 at 1170.484 kb on + strand, within MPMX19_03725 at 1170.484 kb on + strand, within MPMX19_03725 at 1170.484 kb on + strand, within MPMX19_03725 at 1170.484 kb on + strand, within MPMX19_03725 at 1170.485 kb on - strand, within MPMX19_03725 at 1170.485 kb on - strand, within MPMX19_03725 at 1170.485 kb on - strand, within MPMX19_03725 at 1170.485 kb on - strand, within MPMX19_03725 at 1170.485 kb on - strand, within MPMX19_03725 at 1170.532 kb on + strand, within MPMX19_03725 at 1170.532 kb on + strand, within MPMX19_03725 at 1170.532 kb on + strand, within MPMX19_03725 at 1170.532 kb on + strand, within MPMX19_03725 at 1170.532 kb on + strand, within MPMX19_03725 at 1170.533 kb on - strand, within MPMX19_03725 at 1170.533 kb on - strand, within MPMX19_03725 at 1170.533 kb on - strand, within MPMX19_03725 at 1170.533 kb on - strand, within MPMX19_03725 at 1170.533 kb on - strand, within MPMX19_03725 at 1170.533 kb on - strand, within MPMX19_03725 at 1170.533 kb on - strand, within MPMX19_03725 at 1170.568 kb on + strand, within MPMX19_03725 at 1170.569 kb on - strand, within MPMX19_03725 at 1170.569 kb on - strand, within MPMX19_03725 at 1170.569 kb on - strand, within MPMX19_03725 at 1170.569 kb on - strand, within MPMX19_03725 at 1170.569 kb on - strand, within MPMX19_03725 at 1170.569 kb on - strand, within MPMX19_03725 at 1170.652 kb on + strand at 1170.652 kb on + strand at 1170.652 kb on + strand at 1170.653 kb on - strand at 1170.746 kb on - strand at 1170.993 kb on + strand at 1170.993 kb on + strand at 1170.993 kb on + strand at 1170.993 kb on + strand at 1170.994 kb on - strand at 1170.994 kb on - strand at 1170.994 kb on - strand at 1171.086 kb on + strand at 1171.086 kb on + strand at 1171.086 kb on + strand at 1171.086 kb on + strand at 1171.086 kb on + strand at 1171.086 kb on + strand at 1171.086 kb on + strand at 1171.087 kb on - strand at 1171.087 kb on - strand at 1171.087 kb on - strand at 1171.087 kb on - strand at 1171.087 kb on - strand at 1171.087 kb on - strand at 1171.087 kb on - strand at 1171.087 kb on - strand at 1171.087 kb on - strand at 1171.164 kb on - strand at 1171.164 kb on - strand at 1171.182 kb on + strand at 1171.182 kb on + strand at 1171.183 kb on - strand at 1171.405 kb on + strand, within MPMX19_03726 at 1171.405 kb on + strand, within MPMX19_03726 at 1171.406 kb on - strand, within MPMX19_03726 at 1171.406 kb on - strand, within MPMX19_03726 at 1171.406 kb on - strand, within MPMX19_03726 at 1171.406 kb on - strand, within MPMX19_03726 at 1171.453 kb on + strand, within MPMX19_03726 at 1171.454 kb on - strand, within MPMX19_03726 at 1171.454 kb on - strand, within MPMX19_03726 at 1171.741 kb on + strand, within MPMX19_03726 at 1171.741 kb on + strand, within MPMX19_03726 at 1171.741 kb on + strand, within MPMX19_03726 at 1171.741 kb on + strand, within MPMX19_03726 at 1171.742 kb on - strand, within MPMX19_03726 at 1171.742 kb on - strand, within MPMX19_03726 at 1171.742 kb on - strand, within MPMX19_03726 at 1171.742 kb on - strand, within MPMX19_03726 at 1172.383 kb on + strand, within MPMX19_03726 at 1172.383 kb on + strand, within MPMX19_03726 at 1172.383 kb on + strand, within MPMX19_03726 at 1172.383 kb on + strand, within MPMX19_03726 at 1172.383 kb on + strand, within MPMX19_03726 at 1172.383 kb on + strand, within MPMX19_03726 at 1172.384 kb on - strand, within MPMX19_03726 at 1172.384 kb on - strand, within MPMX19_03726 at 1172.853 kb on + strand, within MPMX19_03726 at 1172.853 kb on + strand, within MPMX19_03726 at 1172.853 kb on + strand, within MPMX19_03726 at 1172.853 kb on + strand, within MPMX19_03726 at 1172.854 kb on - strand, within MPMX19_03726 at 1173.428 kb on + strand, within MPMX19_03727 at 1173.428 kb on + strand, within MPMX19_03727 at 1173.428 kb on + strand, within MPMX19_03727 at 1173.428 kb on + strand, within MPMX19_03727 at 1173.429 kb on - strand, within MPMX19_03727 at 1173.434 kb on + strand, within MPMX19_03727 at 1173.434 kb on + strand, within MPMX19_03727 at 1173.435 kb on - strand, within MPMX19_03727 at 1173.435 kb on - strand, within MPMX19_03727 at 1173.601 kb on + strand, within MPMX19_03727 at 1173.601 kb on + strand, within MPMX19_03727 at 1173.601 kb on + strand, within MPMX19_03727 at 1173.601 kb on + strand, within MPMX19_03727 at 1173.601 kb on + strand, within MPMX19_03727 at 1173.602 kb on - strand, within MPMX19_03727 at 1173.602 kb on - strand, within MPMX19_03727 at 1173.602 kb on - strand, within MPMX19_03727 at 1173.924 kb on + strand, within MPMX19_03727 at 1173.924 kb on + strand, within MPMX19_03727 at 1173.925 kb on - strand, within MPMX19_03727 at 1173.925 kb on - strand, within MPMX19_03727 at 1173.925 kb on - strand, within MPMX19_03727 at 1173.925 kb on - strand, within MPMX19_03727 at 1174.023 kb on - strand, within MPMX19_03727 at 1174.023 kb on - strand, within MPMX19_03727 at 1174.023 kb on - strand, within MPMX19_03727
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 1,170,248 + MPMX19_03725 0.76 -0.6 1,170,248 + MPMX19_03725 0.76 -0.2 1,170,248 + MPMX19_03725 0.76 -1.1 1,170,249 - MPMX19_03725 0.76 -1.1 1,170,249 - MPMX19_03725 0.76 -0.4 1,170,484 + MPMX19_03725 0.84 -1.7 1,170,484 + MPMX19_03725 0.84 +0.4 1,170,484 + MPMX19_03725 0.84 -0.4 1,170,484 + MPMX19_03725 0.84 -0.8 1,170,484 + MPMX19_03725 0.84 +0.1 1,170,485 - MPMX19_03725 0.84 -1.8 1,170,485 - MPMX19_03725 0.84 -2.2 1,170,485 - MPMX19_03725 0.84 +0.2 1,170,485 - MPMX19_03725 0.84 +0.2 1,170,485 - MPMX19_03725 0.84 -0.7 1,170,532 + MPMX19_03725 0.86 -1.5 1,170,532 + MPMX19_03725 0.86 -0.2 1,170,532 + MPMX19_03725 0.86 -1.1 1,170,532 + MPMX19_03725 0.86 +0.4 1,170,532 + MPMX19_03725 0.86 -0.8 1,170,533 - MPMX19_03725 0.86 -0.2 1,170,533 - MPMX19_03725 0.86 -1.1 1,170,533 - MPMX19_03725 0.86 -1.4 1,170,533 - MPMX19_03725 0.86 -1.7 1,170,533 - MPMX19_03725 0.86 +1.4 1,170,533 - MPMX19_03725 0.86 -1.3 1,170,533 - MPMX19_03725 0.86 +0.4 1,170,568 + MPMX19_03725 0.87 -0.1 1,170,569 - MPMX19_03725 0.87 +0.1 1,170,569 - MPMX19_03725 0.87 -0.9 1,170,569 - MPMX19_03725 0.87 -0.8 1,170,569 - MPMX19_03725 0.87 -0.0 1,170,569 - MPMX19_03725 0.87 -1.2 1,170,569 - MPMX19_03725 0.87 -0.9 1,170,652 + -1.2 1,170,652 + -1.4 1,170,652 + -1.0 1,170,653 - +0.4 1,170,746 - +0.1 1,170,993 + +0.8 1,170,993 + -1.0 1,170,993 + +0.3 1,170,993 + -0.6 1,170,994 - -2.6 1,170,994 - +1.1 1,170,994 - +1.1 1,171,086 + -0.6 1,171,086 + -0.3 1,171,086 + +0.1 1,171,086 + -2.2 1,171,086 + +0.1 1,171,086 + -0.4 1,171,086 + +0.1 1,171,087 - -0.3 1,171,087 - -1.5 1,171,087 - -0.3 1,171,087 - -0.8 1,171,087 - -1.3 1,171,087 - -0.4 1,171,087 - +0.9 1,171,087 - -0.6 1,171,087 - -0.4 1,171,164 - -1.5 1,171,164 - +0.1 1,171,182 + -0.1 1,171,182 + -0.4 1,171,183 - -2.1 1,171,405 + MPMX19_03726 0.11 +0.1 1,171,405 + MPMX19_03726 0.11 -0.2 1,171,406 - MPMX19_03726 0.11 +0.8 1,171,406 - MPMX19_03726 0.11 +0.2 1,171,406 - MPMX19_03726 0.11 -0.1 1,171,406 - MPMX19_03726 0.11 -0.2 1,171,453 + MPMX19_03726 0.13 -0.6 1,171,454 - MPMX19_03726 0.14 +1.1 1,171,454 - MPMX19_03726 0.14 +2.4 1,171,741 + MPMX19_03726 0.28 -0.7 1,171,741 + MPMX19_03726 0.28 -0.2 1,171,741 + MPMX19_03726 0.28 -0.2 1,171,741 + MPMX19_03726 0.28 -0.6 1,171,742 - MPMX19_03726 0.29 -1.8 1,171,742 - MPMX19_03726 0.29 -0.2 1,171,742 - MPMX19_03726 0.29 -1.3 1,171,742 - MPMX19_03726 0.29 -1.1 1,172,383 + MPMX19_03726 0.62 -1.6 1,172,383 + MPMX19_03726 0.62 -0.2 1,172,383 + MPMX19_03726 0.62 +1.0 1,172,383 + MPMX19_03726 0.62 -1.2 1,172,383 + MPMX19_03726 0.62 -0.4 1,172,383 + MPMX19_03726 0.62 +0.3 1,172,384 - MPMX19_03726 0.62 -0.4 1,172,384 - MPMX19_03726 0.62 -0.4 1,172,853 + MPMX19_03726 0.86 +0.6 1,172,853 + MPMX19_03726 0.86 +0.4 1,172,853 + MPMX19_03726 0.86 -0.9 1,172,853 + MPMX19_03726 0.86 -0.6 1,172,854 - MPMX19_03726 0.86 -0.2 1,173,428 + MPMX19_03727 0.27 -1.1 1,173,428 + MPMX19_03727 0.27 +1.2 1,173,428 + MPMX19_03727 0.27 -0.4 1,173,428 + MPMX19_03727 0.27 -1.4 1,173,429 - MPMX19_03727 0.28 -0.3 1,173,434 + MPMX19_03727 0.28 +0.8 1,173,434 + MPMX19_03727 0.28 -0.7 1,173,435 - MPMX19_03727 0.28 -1.5 1,173,435 - MPMX19_03727 0.28 -0.2 1,173,601 + MPMX19_03727 0.43 +1.4 1,173,601 + MPMX19_03727 0.43 +0.6 1,173,601 + MPMX19_03727 0.43 -1.1 1,173,601 + MPMX19_03727 0.43 +0.6 1,173,601 + MPMX19_03727 0.43 -0.5 1,173,602 - MPMX19_03727 0.43 -0.8 1,173,602 - MPMX19_03727 0.43 -0.6 1,173,602 - MPMX19_03727 0.43 -0.8 1,173,924 + MPMX19_03727 0.72 -1.0 1,173,924 + MPMX19_03727 0.72 -0.8 1,173,925 - MPMX19_03727 0.72 -1.5 1,173,925 - MPMX19_03727 0.72 -0.2 1,173,925 - MPMX19_03727 0.72 -0.9 1,173,925 - MPMX19_03727 0.72 -1.2 1,174,023 - MPMX19_03727 0.81 -2.0 1,174,023 - MPMX19_03727 0.81 +0.4 1,174,023 - MPMX19_03727 0.81 -0.2
Or see this region's nucleotide sequence