Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03619 and MPMX19_03620 are separated by 378 nucleotides MPMX19_03620 and MPMX19_03621 overlap by 23 nucleotides
MPMX19_03619: MPMX19_03619 - hypothetical protein, at 1,050,961 to 1,052,385
_03619
MPMX19_03620: MPMX19_03620 - hypothetical protein, at 1,052,764 to 1,054,866
_03620
MPMX19_03621: MPMX19_03621 - N-acetylglucosamine repressor, at 1,054,844 to 1,056,073
_03621
Position (kb)
1052
1053
1054
1055 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1052.072 kb on - strand, within MPMX19_03619 at 1052.083 kb on + strand, within MPMX19_03619 at 1052.084 kb on - strand, within MPMX19_03619 at 1052.084 kb on - strand, within MPMX19_03619 at 1052.084 kb on - strand, within MPMX19_03619 at 1052.084 kb on - strand, within MPMX19_03619 at 1052.096 kb on - strand, within MPMX19_03619 at 1052.413 kb on + strand at 1052.414 kb on - strand at 1052.433 kb on - strand at 1052.437 kb on - strand at 1052.437 kb on - strand at 1052.441 kb on - strand at 1052.445 kb on + strand at 1052.638 kb on + strand at 1053.244 kb on + strand, within MPMX19_03620 at 1053.245 kb on - strand, within MPMX19_03620 at 1053.245 kb on - strand, within MPMX19_03620 at 1053.664 kb on + strand, within MPMX19_03620 at 1053.664 kb on + strand, within MPMX19_03620 at 1053.664 kb on + strand, within MPMX19_03620 at 1053.664 kb on + strand, within MPMX19_03620 at 1053.664 kb on + strand, within MPMX19_03620 at 1053.664 kb on + strand, within MPMX19_03620 at 1053.664 kb on + strand, within MPMX19_03620 at 1053.665 kb on - strand, within MPMX19_03620 at 1053.665 kb on - strand, within MPMX19_03620 at 1053.665 kb on - strand, within MPMX19_03620 at 1053.665 kb on - strand, within MPMX19_03620 at 1053.665 kb on - strand, within MPMX19_03620 at 1053.665 kb on - strand, within MPMX19_03620 at 1053.665 kb on - strand, within MPMX19_03620 at 1054.959 kb on + strand at 1054.959 kb on + strand at 1054.959 kb on + strand at 1054.959 kb on + strand at 1054.959 kb on + strand at 1054.959 kb on + strand at 1054.959 kb on + strand at 1054.959 kb on + strand at 1054.959 kb on + strand at 1054.959 kb on + strand at 1054.960 kb on - strand at 1054.960 kb on - strand at 1054.960 kb on - strand at 1054.960 kb on - strand at 1054.960 kb on - strand at 1055.005 kb on - strand, within MPMX19_03621 at 1055.120 kb on - strand, within MPMX19_03621 at 1055.356 kb on + strand, within MPMX19_03621 at 1055.356 kb on + strand, within MPMX19_03621 at 1055.356 kb on + strand, within MPMX19_03621 at 1055.357 kb on - strand, within MPMX19_03621 at 1055.357 kb on - strand, within MPMX19_03621 at 1055.357 kb on - strand, within MPMX19_03621 at 1055.357 kb on - strand, within MPMX19_03621 at 1055.357 kb on - strand, within MPMX19_03621 at 1055.357 kb on - strand, within MPMX19_03621 at 1055.357 kb on - strand, within MPMX19_03621 at 1055.357 kb on - strand, within MPMX19_03621 at 1055.357 kb on - strand, within MPMX19_03621 at 1055.357 kb on - strand, within MPMX19_03621 at 1055.394 kb on + strand, within MPMX19_03621 at 1055.395 kb on - strand, within MPMX19_03621 at 1055.538 kb on + strand, within MPMX19_03621 at 1055.538 kb on + strand, within MPMX19_03621 at 1055.538 kb on + strand, within MPMX19_03621 at 1055.538 kb on + strand, within MPMX19_03621 at 1055.538 kb on + strand, within MPMX19_03621 at 1055.538 kb on + strand, within MPMX19_03621 at 1055.539 kb on - strand, within MPMX19_03621 at 1055.539 kb on - strand, within MPMX19_03621 at 1055.539 kb on - strand, within MPMX19_03621 at 1055.539 kb on - strand, within MPMX19_03621 at 1055.539 kb on - strand, within MPMX19_03621 at 1055.539 kb on - strand, within MPMX19_03621 at 1055.539 kb on - strand, within MPMX19_03621 at 1055.565 kb on + strand, within MPMX19_03621
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 1,052,072 - MPMX19_03619 0.78 -1.6 1,052,083 + MPMX19_03619 0.79 -0.6 1,052,084 - MPMX19_03619 0.79 +0.6 1,052,084 - MPMX19_03619 0.79 -0.1 1,052,084 - MPMX19_03619 0.79 -0.4 1,052,084 - MPMX19_03619 0.79 -0.3 1,052,096 - MPMX19_03619 0.80 +0.4 1,052,413 + -0.2 1,052,414 - -0.8 1,052,433 - -1.5 1,052,437 - +0.9 1,052,437 - +1.4 1,052,441 - -0.1 1,052,445 + -0.2 1,052,638 + -1.0 1,053,244 + MPMX19_03620 0.23 -0.4 1,053,245 - MPMX19_03620 0.23 -2.1 1,053,245 - MPMX19_03620 0.23 -0.8 1,053,664 + MPMX19_03620 0.43 -1.3 1,053,664 + MPMX19_03620 0.43 +0.2 1,053,664 + MPMX19_03620 0.43 -2.0 1,053,664 + MPMX19_03620 0.43 +0.1 1,053,664 + MPMX19_03620 0.43 -0.8 1,053,664 + MPMX19_03620 0.43 -1.2 1,053,664 + MPMX19_03620 0.43 -1.2 1,053,665 - MPMX19_03620 0.43 +0.4 1,053,665 - MPMX19_03620 0.43 -1.9 1,053,665 - MPMX19_03620 0.43 +0.4 1,053,665 - MPMX19_03620 0.43 -0.1 1,053,665 - MPMX19_03620 0.43 -1.4 1,053,665 - MPMX19_03620 0.43 -1.2 1,053,665 - MPMX19_03620 0.43 +1.1 1,054,959 + +0.1 1,054,959 + -0.7 1,054,959 + +0.2 1,054,959 + -0.1 1,054,959 + -0.7 1,054,959 + -0.2 1,054,959 + -0.8 1,054,959 + -0.1 1,054,959 + -0.5 1,054,959 + -0.9 1,054,960 - -0.5 1,054,960 - -0.8 1,054,960 - -0.2 1,054,960 - -0.2 1,054,960 - -1.4 1,055,005 - MPMX19_03621 0.13 -0.4 1,055,120 - MPMX19_03621 0.22 -0.3 1,055,356 + MPMX19_03621 0.42 +0.2 1,055,356 + MPMX19_03621 0.42 -1.5 1,055,356 + MPMX19_03621 0.42 +0.6 1,055,357 - MPMX19_03621 0.42 -1.3 1,055,357 - MPMX19_03621 0.42 -0.4 1,055,357 - MPMX19_03621 0.42 -0.6 1,055,357 - MPMX19_03621 0.42 -0.0 1,055,357 - MPMX19_03621 0.42 -0.7 1,055,357 - MPMX19_03621 0.42 -0.4 1,055,357 - MPMX19_03621 0.42 -0.8 1,055,357 - MPMX19_03621 0.42 -0.6 1,055,357 - MPMX19_03621 0.42 +0.1 1,055,357 - MPMX19_03621 0.42 +1.7 1,055,394 + MPMX19_03621 0.45 -2.8 1,055,395 - MPMX19_03621 0.45 +0.9 1,055,538 + MPMX19_03621 0.56 -1.6 1,055,538 + MPMX19_03621 0.56 -0.1 1,055,538 + MPMX19_03621 0.56 +0.4 1,055,538 + MPMX19_03621 0.56 -1.1 1,055,538 + MPMX19_03621 0.56 -0.1 1,055,538 + MPMX19_03621 0.56 +0.4 1,055,539 - MPMX19_03621 0.57 +0.3 1,055,539 - MPMX19_03621 0.57 -0.3 1,055,539 - MPMX19_03621 0.57 +0.2 1,055,539 - MPMX19_03621 0.57 -1.2 1,055,539 - MPMX19_03621 0.57 -2.2 1,055,539 - MPMX19_03621 0.57 -0.6 1,055,539 - MPMX19_03621 0.57 -0.9 1,055,565 + MPMX19_03621 0.59 -0.2
Or see this region's nucleotide sequence