Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03273 and MPMX19_03274 are separated by 193 nucleotides MPMX19_03274 and MPMX19_03275 are separated by 159 nucleotides
MPMX19_03273: MPMX19_03273 - Oligosaccharide 4-alpha-D-glucosyltransferase, at 617,399 to 619,753
_03273
MPMX19_03274: MPMX19_03274 - hypothetical protein, at 619,947 to 620,942
_03274
MPMX19_03275: MPMX19_03275 - HTH-type transcriptional regulator PgrR, at 621,102 to 622,043
_03275
Position (kb) 619
620
621 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 619.142 kb on + strand, within MPMX19_03273 at 619.142 kb on + strand, within MPMX19_03273 at 619.142 kb on + strand, within MPMX19_03273 at 619.142 kb on + strand, within MPMX19_03273 at 619.143 kb on - strand, within MPMX19_03273 at 619.143 kb on - strand, within MPMX19_03273 at 619.143 kb on - strand, within MPMX19_03273 at 619.143 kb on - strand, within MPMX19_03273 at 619.143 kb on - strand, within MPMX19_03273 at 619.143 kb on - strand, within MPMX19_03273 at 619.143 kb on - strand, within MPMX19_03273 at 619.143 kb on - strand, within MPMX19_03273 at 619.148 kb on + strand, within MPMX19_03273 at 619.149 kb on - strand, within MPMX19_03273 at 619.205 kb on + strand, within MPMX19_03273 at 619.343 kb on + strand, within MPMX19_03273 at 619.343 kb on + strand, within MPMX19_03273 at 619.344 kb on - strand, within MPMX19_03273 at 619.508 kb on + strand, within MPMX19_03273 at 619.508 kb on + strand, within MPMX19_03273 at 619.508 kb on + strand, within MPMX19_03273 at 619.508 kb on + strand, within MPMX19_03273 at 619.509 kb on - strand, within MPMX19_03273 at 619.541 kb on + strand at 619.541 kb on + strand at 619.541 kb on + strand at 619.541 kb on + strand at 619.542 kb on - strand at 619.542 kb on - strand at 619.542 kb on - strand at 619.656 kb on - strand at 619.787 kb on - strand at 619.787 kb on - strand at 619.787 kb on - strand at 619.787 kb on - strand at 619.787 kb on - strand at 619.787 kb on - strand at 619.787 kb on - strand at 619.787 kb on - strand at 619.787 kb on - strand at 619.789 kb on - strand at 619.789 kb on - strand at 619.789 kb on - strand at 619.789 kb on - strand at 619.789 kb on - strand at 619.789 kb on - strand at 619.789 kb on - strand at 619.789 kb on - strand at 619.789 kb on - strand at 619.789 kb on - strand at 619.789 kb on - strand at 619.789 kb on - strand at 619.942 kb on + strand at 619.942 kb on + strand at 619.942 kb on + strand at 619.945 kb on + strand at 619.945 kb on + strand at 619.945 kb on + strand at 619.945 kb on + strand at 619.945 kb on + strand at 619.945 kb on + strand at 619.945 kb on + strand at 620.151 kb on + strand, within MPMX19_03274 at 620.151 kb on + strand, within MPMX19_03274 at 620.215 kb on + strand, within MPMX19_03274 at 620.215 kb on + strand, within MPMX19_03274 at 620.215 kb on + strand, within MPMX19_03274 at 620.317 kb on + strand, within MPMX19_03274 at 620.318 kb on - strand, within MPMX19_03274 at 620.318 kb on - strand, within MPMX19_03274 at 620.318 kb on - strand, within MPMX19_03274 at 620.563 kb on + strand, within MPMX19_03274 at 620.564 kb on - strand, within MPMX19_03274 at 620.788 kb on + strand, within MPMX19_03274 at 620.840 kb on + strand, within MPMX19_03274 at 620.840 kb on + strand, within MPMX19_03274 at 620.841 kb on - strand, within MPMX19_03274 at 620.841 kb on - strand, within MPMX19_03274 at 620.841 kb on - strand, within MPMX19_03274 at 620.841 kb on - strand, within MPMX19_03274 at 620.841 kb on - strand, within MPMX19_03274 at 620.841 kb on - strand, within MPMX19_03274 at 621.022 kb on + strand at 621.022 kb on + strand at 621.022 kb on + strand at 621.022 kb on + strand at 621.022 kb on + strand at 621.022 kb on + strand at 621.294 kb on + strand, within MPMX19_03275 at 621.294 kb on + strand, within MPMX19_03275 at 621.294 kb on + strand, within MPMX19_03275 at 621.294 kb on + strand, within MPMX19_03275 at 621.294 kb on + strand, within MPMX19_03275 at 621.294 kb on + strand, within MPMX19_03275 at 621.295 kb on - strand, within MPMX19_03275 at 621.295 kb on - strand, within MPMX19_03275 at 621.295 kb on - strand, within MPMX19_03275 at 621.295 kb on - strand, within MPMX19_03275 at 621.597 kb on + strand, within MPMX19_03275 at 621.597 kb on + strand, within MPMX19_03275 at 621.597 kb on + strand, within MPMX19_03275 at 621.598 kb on - strand, within MPMX19_03275 at 621.612 kb on + strand, within MPMX19_03275 at 621.612 kb on + strand, within MPMX19_03275 at 621.613 kb on - strand, within MPMX19_03275 at 621.613 kb on - strand, within MPMX19_03275
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 619,142 + MPMX19_03273 0.74 -0.5 619,142 + MPMX19_03273 0.74 -0.7 619,142 + MPMX19_03273 0.74 +0.1 619,142 + MPMX19_03273 0.74 -1.5 619,143 - MPMX19_03273 0.74 -1.1 619,143 - MPMX19_03273 0.74 -1.5 619,143 - MPMX19_03273 0.74 +2.2 619,143 - MPMX19_03273 0.74 -0.2 619,143 - MPMX19_03273 0.74 -0.4 619,143 - MPMX19_03273 0.74 -1.1 619,143 - MPMX19_03273 0.74 -0.9 619,143 - MPMX19_03273 0.74 -1.3 619,148 + MPMX19_03273 0.74 +0.6 619,149 - MPMX19_03273 0.74 -0.9 619,205 + MPMX19_03273 0.77 +0.6 619,343 + MPMX19_03273 0.83 -0.4 619,343 + MPMX19_03273 0.83 +1.4 619,344 - MPMX19_03273 0.83 -0.8 619,508 + MPMX19_03273 0.90 -0.1 619,508 + MPMX19_03273 0.90 +0.8 619,508 + MPMX19_03273 0.90 -1.3 619,508 + MPMX19_03273 0.90 +1.8 619,509 - MPMX19_03273 0.90 -0.4 619,541 + +0.4 619,541 + -1.1 619,541 + +0.4 619,541 + -0.3 619,542 - -2.1 619,542 - +0.6 619,542 - -2.8 619,656 - -0.5 619,787 - +0.1 619,787 - +0.1 619,787 - -0.2 619,787 - +0.2 619,787 - -1.9 619,787 - -0.3 619,787 - +0.3 619,787 - -1.3 619,787 - -0.4 619,789 - -0.5 619,789 - -1.1 619,789 - -1.2 619,789 - -0.2 619,789 - -1.2 619,789 - -0.2 619,789 - -1.0 619,789 - +0.1 619,789 - -0.4 619,789 - -0.2 619,789 - +0.8 619,789 - -0.5 619,942 + +0.0 619,942 + -0.2 619,942 + -0.4 619,945 + -0.8 619,945 + -1.2 619,945 + -0.9 619,945 + -0.6 619,945 + -1.3 619,945 + -1.0 619,945 + -0.5 620,151 + MPMX19_03274 0.20 -1.4 620,151 + MPMX19_03274 0.20 -1.4 620,215 + MPMX19_03274 0.27 -1.1 620,215 + MPMX19_03274 0.27 -1.8 620,215 + MPMX19_03274 0.27 -0.7 620,317 + MPMX19_03274 0.37 -1.5 620,318 - MPMX19_03274 0.37 +0.1 620,318 - MPMX19_03274 0.37 -2.1 620,318 - MPMX19_03274 0.37 -1.3 620,563 + MPMX19_03274 0.62 -0.8 620,564 - MPMX19_03274 0.62 -1.1 620,788 + MPMX19_03274 0.84 -1.8 620,840 + MPMX19_03274 0.90 -2.7 620,840 + MPMX19_03274 0.90 -1.5 620,841 - MPMX19_03274 0.90 -0.9 620,841 - MPMX19_03274 0.90 -0.5 620,841 - MPMX19_03274 0.90 +0.8 620,841 - MPMX19_03274 0.90 -1.0 620,841 - MPMX19_03274 0.90 -0.6 620,841 - MPMX19_03274 0.90 +1.1 621,022 + -0.9 621,022 + -0.5 621,022 + -1.9 621,022 + -1.7 621,022 + -0.6 621,022 + -1.4 621,294 + MPMX19_03275 0.20 -0.5 621,294 + MPMX19_03275 0.20 +0.2 621,294 + MPMX19_03275 0.20 +0.4 621,294 + MPMX19_03275 0.20 +0.3 621,294 + MPMX19_03275 0.20 -1.2 621,294 + MPMX19_03275 0.20 +1.1 621,295 - MPMX19_03275 0.20 -2.1 621,295 - MPMX19_03275 0.20 -0.3 621,295 - MPMX19_03275 0.20 +0.1 621,295 - MPMX19_03275 0.20 -0.9 621,597 + MPMX19_03275 0.53 -1.3 621,597 + MPMX19_03275 0.53 +1.1 621,597 + MPMX19_03275 0.53 -3.0 621,598 - MPMX19_03275 0.53 -1.3 621,612 + MPMX19_03275 0.54 -1.6 621,612 + MPMX19_03275 0.54 -1.3 621,613 - MPMX19_03275 0.54 +0.2 621,613 - MPMX19_03275 0.54 -0.6
Or see this region's nucleotide sequence