Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03162 and MPMX19_03163 are separated by 93 nucleotides MPMX19_03163 and MPMX19_03164 are separated by 7 nucleotides MPMX19_03164 and MPMX19_03165 overlap by 1 nucleotides MPMX19_03165 and MPMX19_03166 are separated by 152 nucleotides
MPMX19_03162: MPMX19_03162 - Sensor histidine kinase RcsC, at 454,247 to 455,728
_03162
MPMX19_03163: MPMX19_03163 - hypothetical protein, at 455,822 to 456,502
_03163
MPMX19_03164: MPMX19_03164 - hypothetical protein, at 456,510 to 456,827
_03164
MPMX19_03165: MPMX19_03165 - hypothetical protein, at 456,827 to 457,066
_03165
MPMX19_03166: MPMX19_03166 - Fumarate hydratase class I, aerobic, at 457,219 to 458,844
_03166
Position (kb) 456
457 Strain fitness (log2 ratio) -2
-1
0
1
2 at 455.823 kb on + strand at 455.823 kb on + strand at 455.823 kb on + strand at 455.823 kb on + strand at 455.823 kb on + strand at 455.823 kb on + strand at 455.824 kb on - strand at 455.824 kb on - strand at 455.824 kb on - strand at 455.864 kb on + strand at 455.864 kb on + strand at 455.864 kb on + strand at 455.864 kb on + strand at 455.864 kb on + strand at 455.864 kb on + strand at 455.864 kb on + strand at 455.864 kb on + strand at 455.864 kb on + strand at 455.865 kb on - strand at 455.865 kb on - strand at 455.865 kb on - strand at 455.865 kb on - strand at 455.865 kb on - strand at 455.865 kb on - strand at 455.865 kb on - strand at 455.914 kb on - strand, within MPMX19_03163 at 455.973 kb on + strand, within MPMX19_03163 at 455.974 kb on - strand, within MPMX19_03163 at 455.974 kb on - strand, within MPMX19_03163 at 455.974 kb on - strand, within MPMX19_03163 at 456.096 kb on + strand, within MPMX19_03163 at 456.096 kb on + strand, within MPMX19_03163 at 456.097 kb on - strand, within MPMX19_03163 at 456.097 kb on - strand, within MPMX19_03163 at 456.097 kb on - strand, within MPMX19_03163 at 456.097 kb on - strand, within MPMX19_03163 at 456.097 kb on - strand, within MPMX19_03163 at 456.097 kb on - strand, within MPMX19_03163 at 456.097 kb on - strand, within MPMX19_03163 at 456.097 kb on - strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.228 kb on + strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.229 kb on - strand, within MPMX19_03163 at 456.235 kb on + strand, within MPMX19_03163 at 456.235 kb on + strand, within MPMX19_03163 at 456.236 kb on - strand, within MPMX19_03163 at 456.236 kb on - strand, within MPMX19_03163 at 456.236 kb on - strand, within MPMX19_03163 at 456.468 kb on + strand at 456.507 kb on + strand at 456.507 kb on + strand at 456.507 kb on + strand at 456.507 kb on + strand at 456.507 kb on + strand at 456.507 kb on + strand at 456.507 kb on + strand at 456.508 kb on - strand at 456.508 kb on - strand at 456.508 kb on - strand at 456.508 kb on - strand at 456.607 kb on - strand, within MPMX19_03164 at 456.607 kb on - strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.723 kb on + strand, within MPMX19_03164 at 456.724 kb on - strand, within MPMX19_03164 at 456.724 kb on - strand, within MPMX19_03164 at 456.724 kb on - strand, within MPMX19_03164 at 456.724 kb on - strand, within MPMX19_03164 at 456.724 kb on - strand, within MPMX19_03164 at 456.724 kb on - strand, within MPMX19_03164 at 456.772 kb on + strand, within MPMX19_03164 at 456.772 kb on + strand, within MPMX19_03164 at 456.772 kb on + strand, within MPMX19_03164 at 456.773 kb on - strand, within MPMX19_03164 at 456.773 kb on - strand, within MPMX19_03164 at 456.810 kb on + strand at 456.810 kb on + strand at 456.810 kb on + strand at 456.810 kb on + strand at 456.810 kb on + strand at 456.810 kb on + strand at 456.811 kb on - strand at 456.811 kb on - strand at 456.811 kb on - strand at 456.811 kb on - strand at 456.828 kb on + strand at 456.828 kb on + strand at 456.828 kb on + strand at 456.828 kb on + strand at 456.829 kb on - strand at 456.829 kb on - strand at 456.829 kb on - strand at 456.829 kb on - strand at 456.864 kb on + strand, within MPMX19_03165 at 456.864 kb on + strand, within MPMX19_03165 at 456.864 kb on + strand, within MPMX19_03165 at 456.864 kb on + strand, within MPMX19_03165 at 456.864 kb on + strand, within MPMX19_03165 at 456.864 kb on + strand, within MPMX19_03165 at 457.053 kb on + strand at 457.053 kb on + strand at 457.053 kb on + strand at 457.053 kb on + strand at 457.129 kb on + strand at 457.129 kb on + strand at 457.129 kb on + strand at 457.129 kb on + strand at 457.129 kb on + strand at 457.129 kb on + strand at 457.129 kb on + strand at 457.130 kb on - strand at 457.130 kb on - strand at 457.130 kb on - strand at 457.130 kb on - strand at 457.130 kb on - strand at 457.130 kb on - strand at 457.130 kb on - strand at 457.130 kb on - strand at 457.404 kb on - strand, within MPMX19_03166
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 455,823 + -1.3 455,823 + -0.6 455,823 + -0.2 455,823 + -0.6 455,823 + +0.4 455,823 + -1.5 455,824 - -1.6 455,824 - +0.8 455,824 - -0.6 455,864 + +1.1 455,864 + -1.8 455,864 + -1.8 455,864 + -1.2 455,864 + -1.3 455,864 + -1.1 455,864 + -0.8 455,864 + -0.8 455,864 + -0.2 455,865 - -1.3 455,865 - -1.3 455,865 - +0.1 455,865 - -0.6 455,865 - -1.6 455,865 - -0.0 455,865 - +0.4 455,914 - MPMX19_03163 0.14 +0.6 455,973 + MPMX19_03163 0.22 -0.6 455,974 - MPMX19_03163 0.22 -0.8 455,974 - MPMX19_03163 0.22 -0.3 455,974 - MPMX19_03163 0.22 -0.6 456,096 + MPMX19_03163 0.40 -1.4 456,096 + MPMX19_03163 0.40 -1.5 456,097 - MPMX19_03163 0.40 -0.6 456,097 - MPMX19_03163 0.40 -1.2 456,097 - MPMX19_03163 0.40 -0.4 456,097 - MPMX19_03163 0.40 -0.9 456,097 - MPMX19_03163 0.40 +0.4 456,097 - MPMX19_03163 0.40 -0.9 456,097 - MPMX19_03163 0.40 -2.3 456,097 - MPMX19_03163 0.40 -0.4 456,228 + MPMX19_03163 0.60 -1.2 456,228 + MPMX19_03163 0.60 -0.4 456,228 + MPMX19_03163 0.60 -0.2 456,228 + MPMX19_03163 0.60 +0.8 456,228 + MPMX19_03163 0.60 -1.6 456,228 + MPMX19_03163 0.60 +0.2 456,228 + MPMX19_03163 0.60 +0.4 456,228 + MPMX19_03163 0.60 -0.2 456,228 + MPMX19_03163 0.60 -0.5 456,228 + MPMX19_03163 0.60 +0.6 456,229 - MPMX19_03163 0.60 +0.2 456,229 - MPMX19_03163 0.60 +0.5 456,229 - MPMX19_03163 0.60 -0.3 456,229 - MPMX19_03163 0.60 -1.9 456,229 - MPMX19_03163 0.60 -1.7 456,229 - MPMX19_03163 0.60 +1.7 456,229 - MPMX19_03163 0.60 +0.8 456,229 - MPMX19_03163 0.60 +0.1 456,229 - MPMX19_03163 0.60 -1.4 456,229 - MPMX19_03163 0.60 +0.3 456,235 + MPMX19_03163 0.61 -0.6 456,235 + MPMX19_03163 0.61 -0.9 456,236 - MPMX19_03163 0.61 -0.1 456,236 - MPMX19_03163 0.61 -0.5 456,236 - MPMX19_03163 0.61 +2.4 456,468 + +0.6 456,507 + -0.2 456,507 + +0.3 456,507 + +1.1 456,507 + +0.8 456,507 + +0.1 456,507 + -2.1 456,507 + -0.6 456,508 - -1.2 456,508 - -2.1 456,508 - -0.2 456,508 - +0.8 456,607 - MPMX19_03164 0.31 -0.1 456,607 - MPMX19_03164 0.31 +1.7 456,723 + MPMX19_03164 0.67 -1.0 456,723 + MPMX19_03164 0.67 -0.5 456,723 + MPMX19_03164 0.67 +0.4 456,723 + MPMX19_03164 0.67 +0.3 456,723 + MPMX19_03164 0.67 -0.5 456,723 + MPMX19_03164 0.67 -1.0 456,723 + MPMX19_03164 0.67 -0.4 456,723 + MPMX19_03164 0.67 -1.0 456,723 + MPMX19_03164 0.67 -0.6 456,723 + MPMX19_03164 0.67 -0.4 456,723 + MPMX19_03164 0.67 +1.6 456,723 + MPMX19_03164 0.67 +0.8 456,724 - MPMX19_03164 0.67 -0.2 456,724 - MPMX19_03164 0.67 -0.8 456,724 - MPMX19_03164 0.67 -1.0 456,724 - MPMX19_03164 0.67 -1.7 456,724 - MPMX19_03164 0.67 -0.7 456,724 - MPMX19_03164 0.67 -1.6 456,772 + MPMX19_03164 0.82 +0.6 456,772 + MPMX19_03164 0.82 -0.8 456,772 + MPMX19_03164 0.82 +0.1 456,773 - MPMX19_03164 0.83 -1.8 456,773 - MPMX19_03164 0.83 -0.7 456,810 + -0.3 456,810 + -0.6 456,810 + -1.0 456,810 + -1.3 456,810 + +0.8 456,810 + -1.3 456,811 - -1.5 456,811 - +1.1 456,811 - +0.5 456,811 - -1.6 456,828 + -0.4 456,828 + +0.7 456,828 + -0.4 456,828 + -0.6 456,829 - +0.3 456,829 - -0.8 456,829 - -0.8 456,829 - -1.2 456,864 + MPMX19_03165 0.15 +0.7 456,864 + MPMX19_03165 0.15 +0.6 456,864 + MPMX19_03165 0.15 +0.1 456,864 + MPMX19_03165 0.15 +0.1 456,864 + MPMX19_03165 0.15 -2.3 456,864 + MPMX19_03165 0.15 -1.2 457,053 + +1.1 457,053 + -0.9 457,053 + -0.2 457,053 + -0.8 457,129 + -1.8 457,129 + -1.2 457,129 + -0.6 457,129 + -0.9 457,129 + -0.0 457,129 + +0.1 457,129 + -1.5 457,130 - -2.7 457,130 - -0.8 457,130 - +1.8 457,130 - +0.6 457,130 - +1.4 457,130 - -0.8 457,130 - -0.4 457,130 - -0.0 457,404 - MPMX19_03166 0.11 +0.1
Or see this region's nucleotide sequence