Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03132 and MPMX19_03133 are separated by 32 nucleotides MPMX19_03133 and MPMX19_03134 are separated by 80 nucleotides
MPMX19_03132: MPMX19_03132 - 3-keto-5-aminohexanoate cleavage enzyme, at 420,589 to 421,527
_03132
MPMX19_03133: MPMX19_03133 - D-beta-hydroxybutyrate dehydrogenase, at 421,560 to 422,354
_03133
MPMX19_03134: MPMX19_03134 - hypothetical protein, at 422,435 to 423,649
_03134
Position (kb)
421
422
423 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 420.971 kb on - strand, within MPMX19_03132 at 421.003 kb on + strand, within MPMX19_03132 at 421.004 kb on - strand, within MPMX19_03132 at 421.004 kb on - strand, within MPMX19_03132 at 421.057 kb on + strand, within MPMX19_03132 at 421.057 kb on + strand, within MPMX19_03132 at 421.057 kb on + strand, within MPMX19_03132 at 421.057 kb on + strand, within MPMX19_03132 at 421.057 kb on + strand, within MPMX19_03132 at 421.057 kb on + strand, within MPMX19_03132 at 421.057 kb on + strand, within MPMX19_03132 at 421.058 kb on - strand, within MPMX19_03132 at 421.058 kb on - strand, within MPMX19_03132 at 421.058 kb on - strand, within MPMX19_03132 at 421.058 kb on - strand, within MPMX19_03132 at 421.058 kb on - strand, within MPMX19_03132 at 421.059 kb on + strand, within MPMX19_03132 at 421.060 kb on - strand, within MPMX19_03132 at 421.060 kb on - strand, within MPMX19_03132 at 421.111 kb on + strand, within MPMX19_03132 at 421.111 kb on + strand, within MPMX19_03132 at 421.111 kb on + strand, within MPMX19_03132 at 421.111 kb on + strand, within MPMX19_03132 at 421.111 kb on + strand, within MPMX19_03132 at 421.111 kb on + strand, within MPMX19_03132 at 421.111 kb on + strand, within MPMX19_03132 at 421.112 kb on - strand, within MPMX19_03132 at 421.112 kb on - strand, within MPMX19_03132 at 421.112 kb on - strand, within MPMX19_03132 at 421.112 kb on - strand, within MPMX19_03132 at 421.112 kb on - strand, within MPMX19_03132 at 421.112 kb on - strand, within MPMX19_03132 at 421.112 kb on - strand, within MPMX19_03132 at 421.112 kb on - strand, within MPMX19_03132 at 421.112 kb on - strand, within MPMX19_03132 at 421.112 kb on - strand, within MPMX19_03132 at 421.129 kb on + strand, within MPMX19_03132 at 421.129 kb on + strand, within MPMX19_03132 at 421.129 kb on + strand, within MPMX19_03132 at 421.129 kb on + strand, within MPMX19_03132 at 421.130 kb on - strand, within MPMX19_03132 at 421.130 kb on - strand, within MPMX19_03132 at 421.130 kb on - strand, within MPMX19_03132 at 421.130 kb on - strand, within MPMX19_03132 at 421.130 kb on - strand, within MPMX19_03132 at 421.130 kb on - strand, within MPMX19_03132 at 421.130 kb on - strand, within MPMX19_03132 at 421.276 kb on + strand, within MPMX19_03132 at 421.276 kb on + strand, within MPMX19_03132 at 421.276 kb on + strand, within MPMX19_03132 at 421.276 kb on + strand, within MPMX19_03132 at 421.277 kb on - strand, within MPMX19_03132 at 421.277 kb on - strand, within MPMX19_03132 at 421.277 kb on - strand, within MPMX19_03132 at 421.277 kb on - strand, within MPMX19_03132 at 421.277 kb on - strand, within MPMX19_03132 at 421.277 kb on - strand, within MPMX19_03132 at 421.277 kb on - strand, within MPMX19_03132 at 421.277 kb on - strand, within MPMX19_03132 at 421.378 kb on + strand, within MPMX19_03132 at 421.378 kb on + strand, within MPMX19_03132 at 421.378 kb on + strand, within MPMX19_03132 at 421.378 kb on + strand, within MPMX19_03132 at 421.378 kb on + strand, within MPMX19_03132 at 421.379 kb on - strand, within MPMX19_03132 at 421.379 kb on - strand, within MPMX19_03132 at 421.379 kb on - strand, within MPMX19_03132 at 421.379 kb on - strand, within MPMX19_03132 at 421.379 kb on - strand, within MPMX19_03132 at 421.746 kb on + strand, within MPMX19_03133 at 421.746 kb on + strand, within MPMX19_03133 at 421.746 kb on + strand, within MPMX19_03133 at 421.746 kb on + strand, within MPMX19_03133 at 421.747 kb on - strand, within MPMX19_03133 at 421.747 kb on - strand, within MPMX19_03133 at 421.747 kb on - strand, within MPMX19_03133 at 421.747 kb on - strand, within MPMX19_03133 at 421.747 kb on - strand, within MPMX19_03133 at 421.747 kb on - strand, within MPMX19_03133 at 421.747 kb on - strand, within MPMX19_03133 at 421.828 kb on + strand, within MPMX19_03133 at 421.828 kb on + strand, within MPMX19_03133 at 421.828 kb on + strand, within MPMX19_03133 at 421.828 kb on + strand, within MPMX19_03133 at 421.828 kb on + strand, within MPMX19_03133 at 421.828 kb on + strand, within MPMX19_03133 at 421.828 kb on + strand, within MPMX19_03133 at 421.828 kb on + strand, within MPMX19_03133 at 421.828 kb on + strand, within MPMX19_03133 at 421.829 kb on - strand, within MPMX19_03133 at 421.829 kb on - strand, within MPMX19_03133 at 421.829 kb on - strand, within MPMX19_03133 at 421.829 kb on - strand, within MPMX19_03133 at 421.829 kb on - strand, within MPMX19_03133 at 421.829 kb on - strand, within MPMX19_03133 at 421.829 kb on - strand, within MPMX19_03133 at 421.829 kb on - strand, within MPMX19_03133 at 421.829 kb on - strand, within MPMX19_03133 at 421.829 kb on - strand, within MPMX19_03133 at 421.829 kb on - strand, within MPMX19_03133 at 422.034 kb on + strand, within MPMX19_03133 at 422.034 kb on + strand, within MPMX19_03133 at 422.034 kb on + strand, within MPMX19_03133 at 422.034 kb on + strand, within MPMX19_03133 at 422.034 kb on + strand, within MPMX19_03133 at 422.034 kb on + strand, within MPMX19_03133 at 422.034 kb on + strand, within MPMX19_03133 at 422.034 kb on + strand, within MPMX19_03133 at 422.034 kb on + strand, within MPMX19_03133 at 422.034 kb on + strand, within MPMX19_03133 at 422.034 kb on + strand, within MPMX19_03133 at 422.034 kb on + strand, within MPMX19_03133 at 422.035 kb on - strand, within MPMX19_03133 at 422.035 kb on - strand, within MPMX19_03133 at 422.035 kb on - strand, within MPMX19_03133 at 422.035 kb on - strand, within MPMX19_03133 at 422.035 kb on - strand, within MPMX19_03133 at 422.035 kb on - strand, within MPMX19_03133 at 422.035 kb on - strand, within MPMX19_03133 at 422.035 kb on - strand, within MPMX19_03133 at 422.340 kb on + strand at 422.340 kb on + strand at 422.341 kb on - strand at 422.341 kb on - strand at 422.341 kb on - strand at 422.341 kb on - strand at 422.342 kb on + strand at 422.342 kb on + strand at 422.342 kb on + strand at 422.342 kb on + strand at 422.342 kb on + strand at 422.342 kb on + strand at 422.342 kb on + strand at 422.342 kb on + strand at 422.342 kb on + strand at 422.342 kb on + strand at 422.342 kb on + strand at 422.342 kb on + strand at 422.342 kb on + strand at 422.342 kb on + strand at 422.342 kb on + strand at 422.342 kb on + strand at 422.342 kb on + strand at 422.342 kb on + strand at 422.342 kb on + strand at 422.342 kb on + strand at 422.342 kb on + strand at 422.343 kb on - strand at 422.343 kb on - strand at 422.343 kb on - strand at 422.343 kb on - strand at 422.343 kb on - strand at 422.343 kb on - strand at 422.343 kb on - strand at 422.343 kb on - strand at 422.343 kb on - strand at 422.343 kb on - strand at 422.343 kb on - strand at 422.343 kb on - strand at 422.343 kb on - strand at 422.343 kb on - strand at 422.343 kb on - strand at 422.343 kb on - strand at 422.440 kb on + strand at 422.440 kb on + strand at 422.440 kb on + strand at 422.441 kb on - strand at 422.441 kb on - strand at 422.564 kb on + strand, within MPMX19_03134 at 422.564 kb on + strand, within MPMX19_03134 at 422.564 kb on + strand, within MPMX19_03134 at 422.564 kb on + strand, within MPMX19_03134 at 422.564 kb on + strand, within MPMX19_03134 at 422.564 kb on + strand, within MPMX19_03134 at 422.564 kb on + strand, within MPMX19_03134 at 422.564 kb on + strand, within MPMX19_03134 at 422.564 kb on + strand, within MPMX19_03134 at 422.565 kb on - strand, within MPMX19_03134 at 422.565 kb on - strand, within MPMX19_03134 at 422.565 kb on - strand, within MPMX19_03134 at 422.565 kb on - strand, within MPMX19_03134 at 422.565 kb on - strand, within MPMX19_03134 at 422.565 kb on - strand, within MPMX19_03134 at 422.565 kb on - strand, within MPMX19_03134 at 422.565 kb on - strand, within MPMX19_03134 at 422.565 kb on - strand, within MPMX19_03134 at 422.565 kb on - strand, within MPMX19_03134 at 422.963 kb on + strand, within MPMX19_03134 at 422.963 kb on + strand, within MPMX19_03134 at 422.963 kb on + strand, within MPMX19_03134 at 422.963 kb on + strand, within MPMX19_03134 at 422.964 kb on - strand, within MPMX19_03134 at 422.964 kb on - strand, within MPMX19_03134 at 422.964 kb on - strand, within MPMX19_03134 at 423.074 kb on + strand, within MPMX19_03134 at 423.074 kb on + strand, within MPMX19_03134 at 423.074 kb on + strand, within MPMX19_03134 at 423.074 kb on + strand, within MPMX19_03134 at 423.074 kb on + strand, within MPMX19_03134 at 423.074 kb on + strand, within MPMX19_03134 at 423.075 kb on - strand, within MPMX19_03134 at 423.075 kb on - strand, within MPMX19_03134 at 423.075 kb on - strand, within MPMX19_03134 at 423.075 kb on - strand, within MPMX19_03134 at 423.075 kb on - strand, within MPMX19_03134 at 423.075 kb on - strand, within MPMX19_03134 at 423.075 kb on - strand, within MPMX19_03134 at 423.075 kb on - strand, within MPMX19_03134 at 423.075 kb on - strand, within MPMX19_03134 at 423.075 kb on - strand, within MPMX19_03134 at 423.278 kb on + strand, within MPMX19_03134 at 423.278 kb on + strand, within MPMX19_03134 at 423.278 kb on + strand, within MPMX19_03134 at 423.278 kb on + strand, within MPMX19_03134 at 423.278 kb on + strand, within MPMX19_03134 at 423.278 kb on + strand, within MPMX19_03134 at 423.279 kb on - strand, within MPMX19_03134 at 423.279 kb on - strand, within MPMX19_03134 at 423.279 kb on - strand, within MPMX19_03134 at 423.279 kb on - strand, within MPMX19_03134 at 423.279 kb on - strand, within MPMX19_03134 at 423.279 kb on - strand, within MPMX19_03134
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 420,971 - MPMX19_03132 0.41 -0.4 421,003 + MPMX19_03132 0.44 -0.9 421,004 - MPMX19_03132 0.44 -0.5 421,004 - MPMX19_03132 0.44 +0.6 421,057 + MPMX19_03132 0.50 -1.5 421,057 + MPMX19_03132 0.50 -0.1 421,057 + MPMX19_03132 0.50 -0.8 421,057 + MPMX19_03132 0.50 -0.5 421,057 + MPMX19_03132 0.50 -0.7 421,057 + MPMX19_03132 0.50 +0.7 421,057 + MPMX19_03132 0.50 -0.6 421,058 - MPMX19_03132 0.50 -0.1 421,058 - MPMX19_03132 0.50 +0.5 421,058 - MPMX19_03132 0.50 +1.2 421,058 - MPMX19_03132 0.50 -0.6 421,058 - MPMX19_03132 0.50 -1.3 421,059 + MPMX19_03132 0.50 +0.3 421,060 - MPMX19_03132 0.50 +1.5 421,060 - MPMX19_03132 0.50 +0.1 421,111 + MPMX19_03132 0.56 -1.7 421,111 + MPMX19_03132 0.56 +0.7 421,111 + MPMX19_03132 0.56 -0.7 421,111 + MPMX19_03132 0.56 -1.5 421,111 + MPMX19_03132 0.56 -0.9 421,111 + MPMX19_03132 0.56 -0.8 421,111 + MPMX19_03132 0.56 -0.9 421,112 - MPMX19_03132 0.56 -0.5 421,112 - MPMX19_03132 0.56 -0.4 421,112 - MPMX19_03132 0.56 +0.1 421,112 - MPMX19_03132 0.56 -1.2 421,112 - MPMX19_03132 0.56 -1.4 421,112 - MPMX19_03132 0.56 +0.1 421,112 - MPMX19_03132 0.56 -0.8 421,112 - MPMX19_03132 0.56 -0.4 421,112 - MPMX19_03132 0.56 -0.3 421,112 - MPMX19_03132 0.56 -1.0 421,129 + MPMX19_03132 0.58 -1.3 421,129 + MPMX19_03132 0.58 -0.7 421,129 + MPMX19_03132 0.58 -0.9 421,129 + MPMX19_03132 0.58 -0.2 421,130 - MPMX19_03132 0.58 -0.1 421,130 - MPMX19_03132 0.58 -1.8 421,130 - MPMX19_03132 0.58 +2.0 421,130 - MPMX19_03132 0.58 +0.3 421,130 - MPMX19_03132 0.58 -0.0 421,130 - MPMX19_03132 0.58 -1.9 421,130 - MPMX19_03132 0.58 -0.5 421,276 + MPMX19_03132 0.73 +0.1 421,276 + MPMX19_03132 0.73 +0.1 421,276 + MPMX19_03132 0.73 -0.8 421,276 + MPMX19_03132 0.73 +0.1 421,277 - MPMX19_03132 0.73 -0.7 421,277 - MPMX19_03132 0.73 +1.6 421,277 - MPMX19_03132 0.73 -0.5 421,277 - MPMX19_03132 0.73 -0.2 421,277 - MPMX19_03132 0.73 -1.7 421,277 - MPMX19_03132 0.73 -0.5 421,277 - MPMX19_03132 0.73 +0.9 421,277 - MPMX19_03132 0.73 -1.4 421,378 + MPMX19_03132 0.84 -1.3 421,378 + MPMX19_03132 0.84 -0.4 421,378 + MPMX19_03132 0.84 -0.2 421,378 + MPMX19_03132 0.84 -0.0 421,378 + MPMX19_03132 0.84 -0.5 421,379 - MPMX19_03132 0.84 +0.5 421,379 - MPMX19_03132 0.84 -1.8 421,379 - MPMX19_03132 0.84 -1.7 421,379 - MPMX19_03132 0.84 +0.9 421,379 - MPMX19_03132 0.84 -0.1 421,746 + MPMX19_03133 0.23 +0.9 421,746 + MPMX19_03133 0.23 +0.3 421,746 + MPMX19_03133 0.23 +0.9 421,746 + MPMX19_03133 0.23 -0.5 421,747 - MPMX19_03133 0.24 -1.1 421,747 - MPMX19_03133 0.24 +1.2 421,747 - MPMX19_03133 0.24 -1.0 421,747 - MPMX19_03133 0.24 +0.5 421,747 - MPMX19_03133 0.24 -0.5 421,747 - MPMX19_03133 0.24 -0.9 421,747 - MPMX19_03133 0.24 -0.5 421,828 + MPMX19_03133 0.34 -0.5 421,828 + MPMX19_03133 0.34 -0.1 421,828 + MPMX19_03133 0.34 +1.2 421,828 + MPMX19_03133 0.34 -0.9 421,828 + MPMX19_03133 0.34 -1.9 421,828 + MPMX19_03133 0.34 +1.5 421,828 + MPMX19_03133 0.34 +1.5 421,828 + MPMX19_03133 0.34 -0.0 421,828 + MPMX19_03133 0.34 -0.1 421,829 - MPMX19_03133 0.34 +0.5 421,829 - MPMX19_03133 0.34 +0.9 421,829 - MPMX19_03133 0.34 +0.5 421,829 - MPMX19_03133 0.34 +0.5 421,829 - MPMX19_03133 0.34 +0.4 421,829 - MPMX19_03133 0.34 -0.7 421,829 - MPMX19_03133 0.34 -1.5 421,829 - MPMX19_03133 0.34 +0.6 421,829 - MPMX19_03133 0.34 -0.1 421,829 - MPMX19_03133 0.34 +0.9 421,829 - MPMX19_03133 0.34 +1.1 422,034 + MPMX19_03133 0.60 +2.5 422,034 + MPMX19_03133 0.60 -0.7 422,034 + MPMX19_03133 0.60 -0.0 422,034 + MPMX19_03133 0.60 -0.4 422,034 + MPMX19_03133 0.60 +0.6 422,034 + MPMX19_03133 0.60 -0.7 422,034 + MPMX19_03133 0.60 +1.1 422,034 + MPMX19_03133 0.60 -0.1 422,034 + MPMX19_03133 0.60 -0.2 422,034 + MPMX19_03133 0.60 -0.0 422,034 + MPMX19_03133 0.60 -1.5 422,034 + MPMX19_03133 0.60 +0.9 422,035 - MPMX19_03133 0.60 -0.2 422,035 - MPMX19_03133 0.60 -1.5 422,035 - MPMX19_03133 0.60 -0.6 422,035 - MPMX19_03133 0.60 +0.4 422,035 - MPMX19_03133 0.60 -1.4 422,035 - MPMX19_03133 0.60 -1.0 422,035 - MPMX19_03133 0.60 -1.5 422,035 - MPMX19_03133 0.60 -2.4 422,340 + -1.9 422,340 + -0.9 422,341 - +0.1 422,341 - +0.3 422,341 - -0.1 422,341 - -0.4 422,342 + -1.2 422,342 + -2.1 422,342 + -0.4 422,342 + -1.8 422,342 + -2.1 422,342 + +1.2 422,342 + -1.3 422,342 + -1.5 422,342 + -0.2 422,342 + -0.4 422,342 + +0.2 422,342 + -0.4 422,342 + -2.0 422,342 + -0.5 422,342 + -2.2 422,342 + -0.6 422,342 + -0.2 422,342 + -2.9 422,342 + -0.3 422,342 + -0.6 422,342 + +0.3 422,343 - +0.5 422,343 - +1.2 422,343 - -1.5 422,343 - +1.9 422,343 - -2.4 422,343 - -1.8 422,343 - -0.4 422,343 - -2.5 422,343 - -0.1 422,343 - -1.0 422,343 - -0.7 422,343 - -0.1 422,343 - -1.9 422,343 - -0.2 422,343 - -0.4 422,343 - -1.5 422,440 + -0.7 422,440 + +0.8 422,440 + -1.7 422,441 - +0.1 422,441 - -0.4 422,564 + MPMX19_03134 0.11 -0.9 422,564 + MPMX19_03134 0.11 -0.4 422,564 + MPMX19_03134 0.11 -2.4 422,564 + MPMX19_03134 0.11 -0.1 422,564 + MPMX19_03134 0.11 -1.8 422,564 + MPMX19_03134 0.11 -0.4 422,564 + MPMX19_03134 0.11 -1.4 422,564 + MPMX19_03134 0.11 -0.5 422,564 + MPMX19_03134 0.11 +0.6 422,565 - MPMX19_03134 0.11 -0.6 422,565 - MPMX19_03134 0.11 -1.6 422,565 - MPMX19_03134 0.11 -1.4 422,565 - MPMX19_03134 0.11 -1.1 422,565 - MPMX19_03134 0.11 -2.0 422,565 - MPMX19_03134 0.11 -0.4 422,565 - MPMX19_03134 0.11 -0.1 422,565 - MPMX19_03134 0.11 -0.9 422,565 - MPMX19_03134 0.11 -2.4 422,565 - MPMX19_03134 0.11 -0.5 422,963 + MPMX19_03134 0.43 -0.7 422,963 + MPMX19_03134 0.43 -0.3 422,963 + MPMX19_03134 0.43 -2.2 422,963 + MPMX19_03134 0.43 -0.9 422,964 - MPMX19_03134 0.44 -3.2 422,964 - MPMX19_03134 0.44 -0.9 422,964 - MPMX19_03134 0.44 -1.4 423,074 + MPMX19_03134 0.53 -1.1 423,074 + MPMX19_03134 0.53 -0.4 423,074 + MPMX19_03134 0.53 -1.1 423,074 + MPMX19_03134 0.53 +0.6 423,074 + MPMX19_03134 0.53 -2.1 423,074 + MPMX19_03134 0.53 -0.6 423,075 - MPMX19_03134 0.53 -1.6 423,075 - MPMX19_03134 0.53 -0.9 423,075 - MPMX19_03134 0.53 -1.3 423,075 - MPMX19_03134 0.53 -0.5 423,075 - MPMX19_03134 0.53 -0.5 423,075 - MPMX19_03134 0.53 -1.5 423,075 - MPMX19_03134 0.53 +0.3 423,075 - MPMX19_03134 0.53 -1.0 423,075 - MPMX19_03134 0.53 -0.7 423,075 - MPMX19_03134 0.53 -0.8 423,278 + MPMX19_03134 0.69 -2.2 423,278 + MPMX19_03134 0.69 -1.1 423,278 + MPMX19_03134 0.69 -0.7 423,278 + MPMX19_03134 0.69 -0.7 423,278 + MPMX19_03134 0.69 -0.7 423,278 + MPMX19_03134 0.69 -1.8 423,279 - MPMX19_03134 0.69 +0.9 423,279 - MPMX19_03134 0.69 +0.9 423,279 - MPMX19_03134 0.69 -0.8 423,279 - MPMX19_03134 0.69 -1.2 423,279 - MPMX19_03134 0.69 -0.7 423,279 - MPMX19_03134 0.69 +0.3
Or see this region's nucleotide sequence