Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02513

Experiment: MGL

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX19_02512 and MPMX19_02513 overlap by 4 nucleotidesMPMX19_02513 and MPMX19_02514 overlap by 4 nucleotides MPMX19_02512: MPMX19_02512 - PhoH-like protein, at 2,629,626 to 2,630,735 _02512 MPMX19_02513: MPMX19_02513 - Endoribonuclease YbeY, at 2,630,732 to 2,631,238 _02513 MPMX19_02514: MPMX19_02514 - hypothetical protein, at 2,631,235 to 2,632,191 _02514 Position (kb) 2630 2631 2632Strain fitness (log2 ratio) -2 -1 0 1 2at 2629.827 kb on + strand, within MPMX19_02512at 2629.827 kb on + strand, within MPMX19_02512at 2629.827 kb on + strand, within MPMX19_02512at 2629.827 kb on + strand, within MPMX19_02512at 2629.827 kb on + strand, within MPMX19_02512at 2629.827 kb on + strand, within MPMX19_02512at 2629.827 kb on + strand, within MPMX19_02512at 2629.827 kb on + strand, within MPMX19_02512at 2629.827 kb on + strand, within MPMX19_02512at 2629.922 kb on + strand, within MPMX19_02512at 2629.922 kb on + strand, within MPMX19_02512at 2630.037 kb on + strand, within MPMX19_02512at 2630.037 kb on + strand, within MPMX19_02512at 2630.037 kb on + strand, within MPMX19_02512at 2630.103 kb on + strand, within MPMX19_02512at 2630.103 kb on + strand, within MPMX19_02512at 2630.103 kb on + strand, within MPMX19_02512at 2630.103 kb on + strand, within MPMX19_02512at 2630.103 kb on + strand, within MPMX19_02512at 2630.103 kb on + strand, within MPMX19_02512at 2630.103 kb on + strand, within MPMX19_02512at 2630.103 kb on + strand, within MPMX19_02512at 2630.103 kb on + strand, within MPMX19_02512at 2630.103 kb on + strand, within MPMX19_02512at 2630.103 kb on + strand, within MPMX19_02512at 2630.238 kb on + strand, within MPMX19_02512at 2630.238 kb on + strand, within MPMX19_02512at 2630.238 kb on + strand, within MPMX19_02512at 2630.238 kb on + strand, within MPMX19_02512at 2630.238 kb on + strand, within MPMX19_02512at 2630.238 kb on + strand, within MPMX19_02512at 2630.238 kb on + strand, within MPMX19_02512at 2630.238 kb on + strand, within MPMX19_02512at 2630.253 kb on + strand, within MPMX19_02512at 2630.253 kb on + strand, within MPMX19_02512at 2630.253 kb on + strand, within MPMX19_02512at 2630.253 kb on + strand, within MPMX19_02512at 2630.613 kb on + strand, within MPMX19_02512at 2630.613 kb on + strand, within MPMX19_02512at 2630.613 kb on + strand, within MPMX19_02512at 2630.613 kb on + strand, within MPMX19_02512at 2631.206 kb on + strandat 2631.206 kb on + strandat 2631.207 kb on - strandat 2631.242 kb on - strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.243 kb on + strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.244 kb on - strandat 2631.245 kb on + strandat 2631.245 kb on + strandat 2631.245 kb on + strandat 2631.245 kb on + strandat 2631.245 kb on + strandat 2631.245 kb on + strandat 2631.245 kb on + strandat 2631.245 kb on + strandat 2631.245 kb on + strandat 2631.245 kb on + strandat 2631.245 kb on + strandat 2631.245 kb on + strandat 2631.245 kb on + strandat 2631.245 kb on + strandat 2631.245 kb on + strandat 2631.246 kb on - strandat 2631.246 kb on - strandat 2631.246 kb on - strandat 2631.246 kb on - strandat 2631.246 kb on - strandat 2631.246 kb on - strandat 2631.246 kb on - strandat 2631.246 kb on - strandat 2631.246 kb on - strandat 2631.246 kb on - strandat 2631.246 kb on - strandat 2631.246 kb on - strandat 2631.246 kb on - strandat 2631.246 kb on - strandat 2631.246 kb on - strandat 2631.246 kb on - strandat 2631.513 kb on + strand, within MPMX19_02514at 2631.513 kb on + strand, within MPMX19_02514at 2631.513 kb on + strand, within MPMX19_02514at 2631.514 kb on - strand, within MPMX19_02514at 2631.514 kb on - strand, within MPMX19_02514at 2632.189 kb on + strandat 2632.189 kb on + strandat 2632.189 kb on + strandat 2632.189 kb on + strandat 2632.189 kb on + strandat 2632.189 kb on + strandat 2632.189 kb on + strandat 2632.190 kb on - strandat 2632.190 kb on - strandat 2632.190 kb on - strandat 2632.190 kb on - strandat 2632.190 kb on - strandat 2632.190 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction MGL
remove
2,629,827 + MPMX19_02512 0.18 +0.9
2,629,827 + MPMX19_02512 0.18 -2.0
2,629,827 + MPMX19_02512 0.18 -0.7
2,629,827 + MPMX19_02512 0.18 +0.2
2,629,827 + MPMX19_02512 0.18 -0.6
2,629,827 + MPMX19_02512 0.18 -0.2
2,629,827 + MPMX19_02512 0.18 +0.9
2,629,827 + MPMX19_02512 0.18 -1.0
2,629,827 + MPMX19_02512 0.18 -0.8
2,629,922 + MPMX19_02512 0.27 -0.1
2,629,922 + MPMX19_02512 0.27 -0.6
2,630,037 + MPMX19_02512 0.37 -0.1
2,630,037 + MPMX19_02512 0.37 -0.1
2,630,037 + MPMX19_02512 0.37 -1.6
2,630,103 + MPMX19_02512 0.43 -0.1
2,630,103 + MPMX19_02512 0.43 +0.3
2,630,103 + MPMX19_02512 0.43 -2.0
2,630,103 + MPMX19_02512 0.43 -1.6
2,630,103 + MPMX19_02512 0.43 +0.3
2,630,103 + MPMX19_02512 0.43 +0.3
2,630,103 + MPMX19_02512 0.43 -0.8
2,630,103 + MPMX19_02512 0.43 -0.1
2,630,103 + MPMX19_02512 0.43 -0.1
2,630,103 + MPMX19_02512 0.43 +0.2
2,630,103 + MPMX19_02512 0.43 -0.3
2,630,238 + MPMX19_02512 0.55 -1.1
2,630,238 + MPMX19_02512 0.55 -0.8
2,630,238 + MPMX19_02512 0.55 -1.9
2,630,238 + MPMX19_02512 0.55 -0.3
2,630,238 + MPMX19_02512 0.55 -1.7
2,630,238 + MPMX19_02512 0.55 -0.8
2,630,238 + MPMX19_02512 0.55 +0.3
2,630,238 + MPMX19_02512 0.55 +0.2
2,630,253 + MPMX19_02512 0.56 +0.2
2,630,253 + MPMX19_02512 0.56 -0.8
2,630,253 + MPMX19_02512 0.56 -1.7
2,630,253 + MPMX19_02512 0.56 -0.4
2,630,613 + MPMX19_02512 0.89 -2.1
2,630,613 + MPMX19_02512 0.89 +0.6
2,630,613 + MPMX19_02512 0.89 -1.2
2,630,613 + MPMX19_02512 0.89 -1.1
2,631,206 + -1.0
2,631,206 + +0.3
2,631,207 - +0.2
2,631,242 - -0.7
2,631,243 + +0.2
2,631,243 + -0.8
2,631,243 + -0.5
2,631,243 + -0.7
2,631,243 + +0.2
2,631,243 + -0.4
2,631,243 + +0.9
2,631,243 + +0.9
2,631,243 + -1.2
2,631,243 + +0.2
2,631,243 + +0.8
2,631,243 + -1.1
2,631,243 + -0.5
2,631,243 + -0.8
2,631,243 + -0.5
2,631,243 + -1.1
2,631,243 + +0.2
2,631,243 + -0.0
2,631,243 + +0.2
2,631,243 + -1.0
2,631,243 + -0.6
2,631,243 + +0.5
2,631,243 + +1.3
2,631,243 + -0.9
2,631,243 + +0.5
2,631,243 + +0.7
2,631,243 + -0.4
2,631,243 + -0.1
2,631,244 - -0.5
2,631,244 - -0.3
2,631,244 - +0.0
2,631,244 - +1.7
2,631,244 - -0.7
2,631,244 - -1.0
2,631,244 - -0.8
2,631,244 - +0.0
2,631,244 - -1.4
2,631,244 - +0.4
2,631,244 - +0.0
2,631,244 - -0.3
2,631,244 - +0.6
2,631,244 - -2.4
2,631,244 - +0.3
2,631,244 - -0.1
2,631,244 - -1.1
2,631,244 - -0.7
2,631,244 - +1.5
2,631,244 - -0.8
2,631,244 - +1.9
2,631,244 - -0.1
2,631,244 - +0.3
2,631,244 - -0.0
2,631,244 - -0.1
2,631,244 - -0.7
2,631,244 - +1.0
2,631,244 - -0.0
2,631,244 - -1.6
2,631,244 - +0.7
2,631,244 - -0.3
2,631,244 - +1.5
2,631,245 + -0.3
2,631,245 + +0.0
2,631,245 + -0.1
2,631,245 + -0.4
2,631,245 + +0.6
2,631,245 + -1.1
2,631,245 + -0.8
2,631,245 + -0.4
2,631,245 + +1.1
2,631,245 + -0.2
2,631,245 + +1.2
2,631,245 + -0.5
2,631,245 + -0.9
2,631,245 + +1.7
2,631,245 + -0.5
2,631,246 - +0.7
2,631,246 - -0.1
2,631,246 - -1.2
2,631,246 - -0.3
2,631,246 - +1.2
2,631,246 - +0.2
2,631,246 - +1.5
2,631,246 - +1.3
2,631,246 - -0.7
2,631,246 - -1.8
2,631,246 - +0.7
2,631,246 - -0.3
2,631,246 - +0.2
2,631,246 - -1.2
2,631,246 - +0.5
2,631,246 - -1.6
2,631,513 + MPMX19_02514 0.29 -0.5
2,631,513 + MPMX19_02514 0.29 -0.5
2,631,513 + MPMX19_02514 0.29 -0.2
2,631,514 - MPMX19_02514 0.29 -0.1
2,631,514 - MPMX19_02514 0.29 +1.5
2,632,189 + -1.2
2,632,189 + -0.5
2,632,189 + -1.7
2,632,189 + -1.3
2,632,189 + -1.8
2,632,189 + -1.0
2,632,189 + -0.4
2,632,190 - -1.2
2,632,190 - +0.5
2,632,190 - +0.1
2,632,190 - +0.9
2,632,190 - -1.0
2,632,190 - -0.3

Or see this region's nucleotide sequence