Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01775

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_01774 and MPMX19_01775 are separated by 184 nucleotidesMPMX19_01775 and MPMX19_01776 are separated by 36 nucleotides MPMX19_01774: MPMX19_01774 - Ketol-acid reductoisomerase (NADP(+)), at 1,861,131 to 1,862,150 _01774 MPMX19_01775: MPMX19_01775 - Acetolactate synthase isozyme 3 small subunit, at 1,862,335 to 1,862,841 _01775 MPMX19_01776: MPMX19_01776 - Acetolactate synthase isozyme 3 large subunit, at 1,862,878 to 1,864,641 _01776 Position (kb) 1862 1863Strain fitness (log2 ratio) -1 0 1at 1862.336 kb on + strandat 1862.337 kb on - strandat 1862.337 kb on - strandat 1862.337 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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1,862,336 + +0.0
1,862,337 - -0.0
1,862,337 - -0.5
1,862,337 - -1.2

Or see this region's nucleotide sequence