Strain Fitness in Azospirillum sp. SherDot2

Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01518

Experiment: MGL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	MGL
				remove
1,588,741	+	MPMX19_01517	0.26	-1.3
1,588,741	+	MPMX19_01517	0.26	+0.0
1,588,741	+	MPMX19_01517	0.26	+0.5
1,588,741	+	MPMX19_01517	0.26	-1.3
1,588,741	+	MPMX19_01517	0.26	-1.1
1,588,741	+	MPMX19_01517	0.26	-1.1
1,588,741	+	MPMX19_01517	0.26	-0.6
1,588,741	+	MPMX19_01517	0.26	-0.3
1,588,741	+	MPMX19_01517	0.26	+1.1
1,588,741	+	MPMX19_01517	0.26	-0.5
1,588,741	+	MPMX19_01517	0.26	+0.0
1,588,741	+	MPMX19_01517	0.26	+1.3
1,588,741	+	MPMX19_01517	0.26	+0.7
1,588,742	-	MPMX19_01517	0.26	+1.1
1,588,742	-	MPMX19_01517	0.26	-1.3
1,588,742	-	MPMX19_01517	0.26	-0.3
1,588,742	-	MPMX19_01517	0.26	-0.6
1,588,742	-	MPMX19_01517	0.26	-0.5
1,588,742	-	MPMX19_01517	0.26	-1.9
1,588,742	-	MPMX19_01517	0.26	-1.1
1,588,742	-	MPMX19_01517	0.26	-1.4
1,588,742	-	MPMX19_01517	0.26	-1.3
1,588,742	-	MPMX19_01517	0.26	-1.6
1,588,742	-	MPMX19_01517	0.26	+0.5
1,588,742	-	MPMX19_01517	0.26	-1.9
1,588,963	+	MPMX19_01517	0.43	-0.5
1,588,963	+	MPMX19_01517	0.43	-0.1
1,588,963	+	MPMX19_01517	0.43	-2.4
1,588,963	+	MPMX19_01517	0.43	-2.0
1,589,128	+	MPMX19_01517	0.55	+0.2
1,589,128	+	MPMX19_01517	0.55	+2.3
1,589,128	+	MPMX19_01517	0.55	-0.8
1,589,128	+	MPMX19_01517	0.55	-1.7
1,589,128	+	MPMX19_01517	0.55	-1.3
1,589,128	+	MPMX19_01517	0.55	-0.7
1,589,129	-	MPMX19_01517	0.55	-0.8
1,589,129	-	MPMX19_01517	0.55	+1.0
1,589,129	-	MPMX19_01517	0.55	-1.1
1,589,129	-	MPMX19_01517	0.55	-1.0
1,589,129	-	MPMX19_01517	0.55	-0.5
1,589,129	-	MPMX19_01517	0.55	-0.9
1,589,264	+	MPMX19_01517	0.66	+0.2
1,589,265	-	MPMX19_01517	0.66	-1.1
1,589,368	+	MPMX19_01517	0.74	-0.8
1,589,368	+	MPMX19_01517	0.74	-1.6
1,589,368	+	MPMX19_01517	0.74	-0.4
1,589,368	+	MPMX19_01517	0.74	-1.6
1,589,368	+	MPMX19_01517	0.74	-1.1
1,589,368	+	MPMX19_01517	0.74	-1.4
1,589,368	+	MPMX19_01517	0.74	+0.0
1,589,368	+	MPMX19_01517	0.74	-2.3
1,589,369	-	MPMX19_01517	0.74	+0.3
1,589,369	-	MPMX19_01517	0.74	-1.9
1,589,369	-	MPMX19_01517	0.74	-1.3
1,589,369	-	MPMX19_01517	0.74	-0.5
1,589,369	-	MPMX19_01517	0.74	+1.3
1,589,369	-	MPMX19_01517	0.74	-0.2
1,589,369	-	MPMX19_01517	0.74	-0.4
1,589,533	+	MPMX19_01517	0.87	-0.5
1,589,533	+	MPMX19_01517	0.87	-0.3
1,589,533	+	MPMX19_01517	0.87	-1.1
1,589,533	+	MPMX19_01517	0.87	-1.3
1,589,533	+	MPMX19_01517	0.87	-1.0
1,589,533	+	MPMX19_01517	0.87	-1.1
1,589,534	-	MPMX19_01517	0.87	+0.7
1,589,534	-	MPMX19_01517	0.87	-1.7
1,589,534	-	MPMX19_01517	0.87	-0.6
1,589,534	-	MPMX19_01517	0.87	-1.1
1,589,534	-	MPMX19_01517	0.87	+2.1
1,589,534	-	MPMX19_01517	0.87	+0.2
1,589,534	-	MPMX19_01517	0.87	+0.0
1,589,534	-	MPMX19_01517	0.87	-1.0
1,589,534	-	MPMX19_01517	0.87	-2.0
1,589,534	-	MPMX19_01517	0.87	-1.5
1,589,534	-	MPMX19_01517	0.87	-1.0
1,589,534	-	MPMX19_01517	0.87	-2.7
1,589,534	-	MPMX19_01517	0.87	-0.8
1,589,611	+			-0.5
1,589,611	+			-0.1
1,589,611	+			-1.5
1,589,612	-			-0.4
1,589,612	-			-3.5
1,589,612	-			+0.3
1,589,612	-			+0.0
1,589,612	-			-2.2
1,589,612	-			-1.5
1,589,612	-			+0.3
1,589,815	+	MPMX19_01518	0.16	+1.1
1,589,815	+	MPMX19_01518	0.16	-1.3
1,589,815	+	MPMX19_01518	0.16	+0.0
1,589,816	-	MPMX19_01518	0.17	-0.7
1,589,816	-	MPMX19_01518	0.17	-1.4
1,589,816	-	MPMX19_01518	0.17	-1.5
1,589,816	-	MPMX19_01518	0.17	-1.0
1,589,816	-	MPMX19_01518	0.17	-0.5
1,589,816	-	MPMX19_01518	0.17	-0.8
1,590,034	+	MPMX19_01518	0.57	+0.3
1,590,034	+	MPMX19_01518	0.57	+0.8
1,590,034	+	MPMX19_01518	0.57	+0.7
1,590,034	+	MPMX19_01518	0.57	+0.0
1,590,034	+	MPMX19_01518	0.57	-0.4
1,590,035	-	MPMX19_01518	0.57	-1.2
1,590,035	-	MPMX19_01518	0.57	-0.6
1,590,035	-	MPMX19_01518	0.57	-1.8
1,590,094	+	MPMX19_01518	0.68	+0.2
1,590,094	+	MPMX19_01518	0.68	+0.1
1,590,094	+	MPMX19_01518	0.68	+0.6
1,590,094	+	MPMX19_01518	0.68	+0.9
1,590,094	+	MPMX19_01518	0.68	-2.8
1,590,094	+	MPMX19_01518	0.68	-0.8
1,590,094	+	MPMX19_01518	0.68	-1.0
1,590,094	+	MPMX19_01518	0.68	-1.6
1,590,094	+	MPMX19_01518	0.68	-1.8
1,590,094	+	MPMX19_01518	0.68	+0.7
1,590,094	+	MPMX19_01518	0.68	+0.7
1,590,094	+	MPMX19_01518	0.68	+0.7
1,590,095	-	MPMX19_01518	0.69	-1.1
1,590,095	-	MPMX19_01518	0.69	-1.2
1,590,095	-	MPMX19_01518	0.69	+0.7
1,590,095	-	MPMX19_01518	0.69	-1.0
1,590,095	-	MPMX19_01518	0.69	+0.7
1,590,095	-	MPMX19_01518	0.69	-0.8
1,590,095	-	MPMX19_01518	0.69	-2.1
1,590,095	-	MPMX19_01518	0.69	+1.1
1,590,095	-	MPMX19_01518	0.69	-2.1
1,590,095	-	MPMX19_01518	0.69	-1.5
1,590,112	+	MPMX19_01518	0.72	-0.9
1,590,112	+	MPMX19_01518	0.72	+1.0
1,590,112	+	MPMX19_01518	0.72	-1.5
1,590,112	+	MPMX19_01518	0.72	+0.5
1,590,112	+	MPMX19_01518	0.72	-1.4
1,590,113	-	MPMX19_01518	0.72	-1.5
1,590,113	-	MPMX19_01518	0.72	-1.2
1,590,113	-	MPMX19_01518	0.72	-1.0
1,590,113	-	MPMX19_01518	0.72	-0.6
1,590,113	-	MPMX19_01518	0.72	-1.8
1,590,113	-	MPMX19_01518	0.72	-1.8
1,590,214	+			-0.3
1,590,214	+			-1.0
1,590,214	+			+0.0
1,590,214	+			-1.5
1,590,214	+			-0.6
1,590,214	+			-1.0
1,590,214	+			+0.0
1,590,214	+			-0.2
1,590,214	+			+0.2
1,590,215	-			-1.3
1,590,215	-			-2.1
1,590,215	-			+0.0
1,590,297	+			+1.3
1,590,360	+	MPMX19_01519	0.12	-0.9
1,590,360	+	MPMX19_01519	0.12	-0.9
1,590,360	+	MPMX19_01519	0.12	-0.1
1,590,360	+	MPMX19_01519	0.12	-0.4
1,590,360	+	MPMX19_01519	0.12	-1.5
1,590,360	+	MPMX19_01519	0.12	-0.7
1,590,360	+	MPMX19_01519	0.12	-0.6
1,590,360	+	MPMX19_01519	0.12	+0.2
1,590,360	+	MPMX19_01519	0.12	-2.1
1,590,360	+	MPMX19_01519	0.12	-1.2
1,590,361	-	MPMX19_01519	0.13	-0.2
1,590,361	-	MPMX19_01519	0.13	+0.5
1,590,361	-	MPMX19_01519	0.13	-0.5
1,590,361	-	MPMX19_01519	0.13	-1.0
1,590,361	-	MPMX19_01519	0.13	-0.5
1,590,361	-	MPMX19_01519	0.13	-1.2
1,590,361	-	MPMX19_01519	0.13	-0.0
1,590,361	-	MPMX19_01519	0.13	-1.4
1,590,361	-	MPMX19_01519	0.13	+0.6
1,590,361	-	MPMX19_01519	0.13	+0.8
1,590,361	-	MPMX19_01519	0.13	-0.8
1,590,361	-	MPMX19_01519	0.13	-0.8
1,590,366	+	MPMX19_01519	0.13	-0.8
1,590,366	+	MPMX19_01519	0.13	+0.3
1,590,366	+	MPMX19_01519	0.13	-0.4
1,590,367	-	MPMX19_01519	0.13	-0.1
1,590,367	-	MPMX19_01519	0.13	-2.2
1,590,367	-	MPMX19_01519	0.13	+0.5
1,590,367	-	MPMX19_01519	0.13	-1.2
1,590,367	-	MPMX19_01519	0.13	+0.3
1,590,367	-	MPMX19_01519	0.13	+0.0
1,590,367	-	MPMX19_01519	0.13	-0.1
1,590,367	-	MPMX19_01519	0.13	-1.1
1,590,367	-	MPMX19_01519	0.13	+1.5
1,590,367	-	MPMX19_01519	0.13	+0.8
1,590,367	-	MPMX19_01519	0.13	-0.8
1,590,367	-	MPMX19_01519	0.13	-1.2
1,590,399	+	MPMX19_01519	0.17	-1.2
1,590,399	+	MPMX19_01519	0.17	-1.0
1,590,400	-	MPMX19_01519	0.17	+0.9
1,590,400	-	MPMX19_01519	0.17	-0.2
1,590,672	+	MPMX19_01519	0.51	-1.1
1,590,672	+	MPMX19_01519	0.51	-1.8
1,590,672	+	MPMX19_01519	0.51	-0.1
1,590,672	+	MPMX19_01519	0.51	+0.5
1,590,672	+	MPMX19_01519	0.51	-0.9
1,590,672	+	MPMX19_01519	0.51	+0.8
1,590,672	+	MPMX19_01519	0.51	-0.9
1,590,672	+	MPMX19_01519	0.51	+1.3
1,590,672	+	MPMX19_01519	0.51	-1.4
1,590,673	-	MPMX19_01519	0.51	+0.5
1,590,673	-	MPMX19_01519	0.51	+0.2
1,590,673	-	MPMX19_01519	0.51	-1.5
1,590,673	-	MPMX19_01519	0.51	-0.1
1,590,673	-	MPMX19_01519	0.51	-1.0
1,590,673	-	MPMX19_01519	0.51	-0.5
1,590,673	-	MPMX19_01519	0.51	+0.0
1,590,673	-	MPMX19_01519	0.51	-0.9
1,590,673	-	MPMX19_01519	0.51	-0.5
1,590,804	+	MPMX19_01519	0.67	-2.4
1,590,804	+	MPMX19_01519	0.67	-1.6
1,590,804	+	MPMX19_01519	0.67	-1.8
1,590,804	+	MPMX19_01519	0.67	-0.4
1,590,804	+	MPMX19_01519	0.67	-1.8
1,590,805	-	MPMX19_01519	0.68	-0.7
1,590,805	-	MPMX19_01519	0.68	+0.2
1,590,805	-	MPMX19_01519	0.68	-1.5
1,590,805	-	MPMX19_01519	0.68	-0.8
1,590,805	-	MPMX19_01519	0.68	-0.1
1,591,114	+			-0.6
1,591,114	+			-1.2
1,591,115	-			-0.8
1,591,115	-			-0.7
1,591,197	-			+0.2
1,591,255	+			+0.8
1,591,256	-			+0.2

Or see this region's nucleotide sequence