Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00728

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00727 and MPMX19_00728 are separated by 34 nucleotidesMPMX19_00728 and MPMX19_00729 are separated by 58 nucleotides MPMX19_00727: MPMX19_00727 - Serine hydroxymethyltransferase 2, at 748,524 to 749,825 _00727 MPMX19_00728: MPMX19_00728 - Transcriptional repressor NrdR, at 749,860 to 750,327 _00728 MPMX19_00729: MPMX19_00729 - K(+)-insensitive pyrophosphate-energized proton pump, at 750,386 to 752,488 _00729 Position (kb) 749 750 751Strain fitness (log2 ratio) -3 -2 -1 0 1at 749.811 kb on + strandat 749.812 kb on - strandat 749.812 kb on - strandat 749.823 kb on + strandat 749.823 kb on + strandat 749.823 kb on + strandat 749.823 kb on + strandat 749.824 kb on - strandat 749.824 kb on - strandat 749.824 kb on - strandat 749.824 kb on - strandat 749.824 kb on - strandat 749.824 kb on - strandat 749.838 kb on + strandat 749.838 kb on + strandat 749.838 kb on + strandat 749.838 kb on + strandat 749.838 kb on + strandat 749.838 kb on + strandat 749.839 kb on - strandat 749.839 kb on - strandat 749.839 kb on - strandat 749.839 kb on - strandat 749.839 kb on - strandat 749.839 kb on - strandat 749.839 kb on - strandat 749.839 kb on - strandat 749.839 kb on - strandat 749.843 kb on - strandat 749.843 kb on - strandat 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.229 kb on + strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.230 kb on - strand, within MPMX19_00728at 750.232 kb on - strand, within MPMX19_00728at 750.232 kb on - strand, within MPMX19_00728at 750.232 kb on - strand, within MPMX19_00728at 750.238 kb on + strand, within MPMX19_00728at 750.250 kb on + strand, within MPMX19_00728at 750.250 kb on + strand, within MPMX19_00728at 750.250 kb on + strand, within MPMX19_00728at 750.250 kb on + strand, within MPMX19_00728at 750.250 kb on + strand, within MPMX19_00728at 750.251 kb on - strand, within MPMX19_00728at 750.251 kb on - strand, within MPMX19_00728at 750.478 kb on + strandat 750.478 kb on + strandat 750.478 kb on + strandat 750.478 kb on + strandat 750.478 kb on + strandat 750.478 kb on + strandat 750.478 kb on + strandat 750.478 kb on + strandat 750.478 kb on + strandat 750.478 kb on + strandat 750.478 kb on + strandat 750.478 kb on + strandat 750.478 kb on + strandat 750.479 kb on - strandat 750.479 kb on - strandat 750.479 kb on - strandat 750.479 kb on - strandat 750.479 kb on - strandat 750.479 kb on - strandat 750.479 kb on - strandat 750.479 kb on - strandat 750.479 kb on - strandat 750.479 kb on - strandat 750.480 kb on + strandat 750.480 kb on + strandat 750.480 kb on + strandat 750.480 kb on + strandat 750.480 kb on + strandat 750.480 kb on + strandat 750.480 kb on + strandat 750.480 kb on + strandat 750.480 kb on + strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.481 kb on - strandat 750.702 kb on + strand, within MPMX19_00729at 750.702 kb on + strand, within MPMX19_00729at 750.702 kb on + strand, within MPMX19_00729at 750.702 kb on + strand, within MPMX19_00729at 750.702 kb on + strand, within MPMX19_00729at 750.702 kb on + strand, within MPMX19_00729at 750.702 kb on + strand, within MPMX19_00729at 750.702 kb on + strand, within MPMX19_00729at 750.702 kb on + strand, within MPMX19_00729at 750.702 kb on + strand, within MPMX19_00729at 750.702 kb on + strand, within MPMX19_00729at 750.702 kb on + strand, within MPMX19_00729at 750.703 kb on - strand, within MPMX19_00729at 750.703 kb on - strand, within MPMX19_00729at 750.703 kb on - strand, within MPMX19_00729at 750.703 kb on - strand, within MPMX19_00729at 750.703 kb on - strand, within MPMX19_00729at 750.703 kb on - strand, within MPMX19_00729at 750.703 kb on - strand, within MPMX19_00729at 750.792 kb on + strand, within MPMX19_00729at 750.793 kb on - strand, within MPMX19_00729at 750.912 kb on + strand, within MPMX19_00729at 750.912 kb on + strand, within MPMX19_00729at 750.912 kb on + strand, within MPMX19_00729at 750.913 kb on - strand, within MPMX19_00729at 750.913 kb on - strand, within MPMX19_00729at 750.951 kb on + strand, within MPMX19_00729at 750.951 kb on + strand, within MPMX19_00729at 750.951 kb on + strand, within MPMX19_00729at 750.951 kb on + strand, within MPMX19_00729at 750.951 kb on + strand, within MPMX19_00729at 750.951 kb on + strand, within MPMX19_00729at 750.951 kb on + strand, within MPMX19_00729at 750.951 kb on + strand, within MPMX19_00729at 750.952 kb on - strand, within MPMX19_00729at 750.952 kb on - strand, within MPMX19_00729at 750.952 kb on - strand, within MPMX19_00729at 750.952 kb on - strand, within MPMX19_00729at 750.952 kb on - strand, within MPMX19_00729at 750.952 kb on - strand, within MPMX19_00729at 750.952 kb on - strand, within MPMX19_00729at 750.952 kb on - strand, within MPMX19_00729at 750.952 kb on - strand, within MPMX19_00729at 750.952 kb on - strand, within MPMX19_00729at 750.993 kb on + strand, within MPMX19_00729at 750.993 kb on + strand, within MPMX19_00729at 750.993 kb on + strand, within MPMX19_00729at 750.993 kb on + strand, within MPMX19_00729at 750.993 kb on + strand, within MPMX19_00729at 750.993 kb on + strand, within MPMX19_00729at 750.993 kb on + strand, within MPMX19_00729at 750.993 kb on + strand, within MPMX19_00729at 750.993 kb on + strand, within MPMX19_00729at 750.993 kb on + strand, within MPMX19_00729at 750.993 kb on + strand, within MPMX19_00729at 750.993 kb on + strand, within MPMX19_00729at 750.993 kb on + strand, within MPMX19_00729at 750.994 kb on - strand, within MPMX19_00729at 750.994 kb on - strand, within MPMX19_00729at 750.994 kb on - strand, within MPMX19_00729at 750.994 kb on - strand, within MPMX19_00729at 750.994 kb on - strand, within MPMX19_00729at 750.994 kb on - strand, within MPMX19_00729at 750.994 kb on - strand, within MPMX19_00729at 750.994 kb on - strand, within MPMX19_00729at 751.014 kb on + strand, within MPMX19_00729at 751.014 kb on + strand, within MPMX19_00729at 751.014 kb on + strand, within MPMX19_00729at 751.014 kb on + strand, within MPMX19_00729at 751.014 kb on + strand, within MPMX19_00729at 751.015 kb on - strand, within MPMX19_00729at 751.015 kb on - strand, within MPMX19_00729at 751.015 kb on - strand, within MPMX19_00729at 751.015 kb on - strand, within MPMX19_00729at 751.062 kb on + strand, within MPMX19_00729at 751.062 kb on + strand, within MPMX19_00729at 751.062 kb on + strand, within MPMX19_00729at 751.062 kb on + strand, within MPMX19_00729at 751.062 kb on + strand, within MPMX19_00729at 751.062 kb on + strand, within MPMX19_00729at 751.063 kb on - strand, within MPMX19_00729at 751.063 kb on - strand, within MPMX19_00729at 751.063 kb on - strand, within MPMX19_00729at 751.063 kb on - strand, within MPMX19_00729at 751.063 kb on - strand, within MPMX19_00729at 751.063 kb on - strand, within MPMX19_00729at 751.185 kb on + strand, within MPMX19_00729at 751.185 kb on + strand, within MPMX19_00729at 751.186 kb on - strand, within MPMX19_00729at 751.186 kb on - strand, within MPMX19_00729

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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749,811 + -2.1
749,812 - -1.2
749,812 - +1.0
749,823 + -1.4
749,823 + +0.4
749,823 + -1.5
749,823 + -0.3
749,824 - -0.8
749,824 - -0.2
749,824 - +0.4
749,824 - +0.4
749,824 - +0.0
749,824 - +0.0
749,838 + -1.3
749,838 + +0.0
749,838 + -2.0
749,838 + -1.1
749,838 + +0.8
749,838 + -1.0
749,839 - +0.0
749,839 - -1.1
749,839 - -0.6
749,839 - +0.4
749,839 - -0.6
749,839 - -0.6
749,839 - +0.3
749,839 - -1.4
749,839 - +0.4
749,843 - -1.3
749,843 - -2.0
750,229 + MPMX19_00728 0.79 -2.8
750,229 + MPMX19_00728 0.79 -1.2
750,229 + MPMX19_00728 0.79 -1.0
750,229 + MPMX19_00728 0.79 +0.4
750,229 + MPMX19_00728 0.79 +0.0
750,229 + MPMX19_00728 0.79 -2.0
750,229 + MPMX19_00728 0.79 -0.4
750,229 + MPMX19_00728 0.79 -1.2
750,229 + MPMX19_00728 0.79 -0.9
750,229 + MPMX19_00728 0.79 +0.8
750,229 + MPMX19_00728 0.79 -1.4
750,229 + MPMX19_00728 0.79 -1.2
750,229 + MPMX19_00728 0.79 -0.5
750,229 + MPMX19_00728 0.79 -1.1
750,229 + MPMX19_00728 0.79 -0.8
750,229 + MPMX19_00728 0.79 -1.0
750,229 + MPMX19_00728 0.79 -0.7
750,229 + MPMX19_00728 0.79 -0.8
750,230 - MPMX19_00728 0.79 +0.8
750,230 - MPMX19_00728 0.79 -0.1
750,230 - MPMX19_00728 0.79 -1.2
750,230 - MPMX19_00728 0.79 -1.2
750,230 - MPMX19_00728 0.79 +0.4
750,230 - MPMX19_00728 0.79 -0.0
750,230 - MPMX19_00728 0.79 -0.6
750,230 - MPMX19_00728 0.79 +0.2
750,230 - MPMX19_00728 0.79 -0.8
750,230 - MPMX19_00728 0.79 +1.4
750,230 - MPMX19_00728 0.79 -1.5
750,230 - MPMX19_00728 0.79 -1.0
750,230 - MPMX19_00728 0.79 -1.4
750,230 - MPMX19_00728 0.79 -0.6
750,230 - MPMX19_00728 0.79 -0.4
750,230 - MPMX19_00728 0.79 -0.2
750,230 - MPMX19_00728 0.79 -1.3
750,232 - MPMX19_00728 0.79 +0.6
750,232 - MPMX19_00728 0.79 -0.4
750,232 - MPMX19_00728 0.79 +0.0
750,238 + MPMX19_00728 0.81 -0.8
750,250 + MPMX19_00728 0.83 -1.0
750,250 + MPMX19_00728 0.83 +0.1
750,250 + MPMX19_00728 0.83 -2.1
750,250 + MPMX19_00728 0.83 +0.8
750,250 + MPMX19_00728 0.83 -2.3
750,251 - MPMX19_00728 0.84 +1.0
750,251 - MPMX19_00728 0.84 -1.3
750,478 + -1.0
750,478 + +0.0
750,478 + +0.8
750,478 + -0.3
750,478 + -2.0
750,478 + -0.2
750,478 + +0.0
750,478 + -1.4
750,478 + -0.6
750,478 + +1.2
750,478 + +0.2
750,478 + -0.7
750,478 + -1.0
750,479 - -1.5
750,479 - +1.1
750,479 - -0.4
750,479 - -1.2
750,479 - -0.2
750,479 - -2.7
750,479 - -0.9
750,479 - -2.3
750,479 - -0.4
750,479 - -1.7
750,480 + +0.0
750,480 + +0.4
750,480 + -0.3
750,480 + -0.4
750,480 + -0.8
750,480 + -1.5
750,480 + -0.8
750,480 + -0.1
750,480 + -0.7
750,481 - -0.1
750,481 - -1.2
750,481 - -1.0
750,481 - +0.5
750,481 - -0.5
750,481 - -2.0
750,481 - -2.3
750,481 - -1.8
750,481 - -2.0
750,481 - -0.2
750,481 - -1.2
750,481 - -1.4
750,481 - -0.2
750,481 - -0.3
750,702 + MPMX19_00729 0.15 +0.6
750,702 + MPMX19_00729 0.15 +0.6
750,702 + MPMX19_00729 0.15 -1.5
750,702 + MPMX19_00729 0.15 -0.5
750,702 + MPMX19_00729 0.15 -0.2
750,702 + MPMX19_00729 0.15 +0.0
750,702 + MPMX19_00729 0.15 -1.8
750,702 + MPMX19_00729 0.15 -0.1
750,702 + MPMX19_00729 0.15 -0.8
750,702 + MPMX19_00729 0.15 -1.1
750,702 + MPMX19_00729 0.15 +0.4
750,702 + MPMX19_00729 0.15 +0.8
750,703 - MPMX19_00729 0.15 -1.2
750,703 - MPMX19_00729 0.15 -0.4
750,703 - MPMX19_00729 0.15 -0.7
750,703 - MPMX19_00729 0.15 -0.2
750,703 - MPMX19_00729 0.15 +0.0
750,703 - MPMX19_00729 0.15 +0.0
750,703 - MPMX19_00729 0.15 +0.0
750,792 + MPMX19_00729 0.19 -0.7
750,793 - MPMX19_00729 0.19 -1.0
750,912 + MPMX19_00729 0.25 -1.4
750,912 + MPMX19_00729 0.25 +0.0
750,912 + MPMX19_00729 0.25 +0.0
750,913 - MPMX19_00729 0.25 -1.3
750,913 - MPMX19_00729 0.25 -2.4
750,951 + MPMX19_00729 0.27 -0.3
750,951 + MPMX19_00729 0.27 -1.6
750,951 + MPMX19_00729 0.27 -0.4
750,951 + MPMX19_00729 0.27 -0.5
750,951 + MPMX19_00729 0.27 -1.2
750,951 + MPMX19_00729 0.27 -1.2
750,951 + MPMX19_00729 0.27 -0.9
750,951 + MPMX19_00729 0.27 -1.8
750,952 - MPMX19_00729 0.27 -0.5
750,952 - MPMX19_00729 0.27 -1.8
750,952 - MPMX19_00729 0.27 -2.2
750,952 - MPMX19_00729 0.27 -1.6
750,952 - MPMX19_00729 0.27 -0.5
750,952 - MPMX19_00729 0.27 -0.8
750,952 - MPMX19_00729 0.27 +0.4
750,952 - MPMX19_00729 0.27 +1.6
750,952 - MPMX19_00729 0.27 -0.3
750,952 - MPMX19_00729 0.27 -0.8
750,993 + MPMX19_00729 0.29 -2.3
750,993 + MPMX19_00729 0.29 -0.4
750,993 + MPMX19_00729 0.29 -2.0
750,993 + MPMX19_00729 0.29 -0.2
750,993 + MPMX19_00729 0.29 +0.2
750,993 + MPMX19_00729 0.29 -0.8
750,993 + MPMX19_00729 0.29 -1.3
750,993 + MPMX19_00729 0.29 -0.1
750,993 + MPMX19_00729 0.29 -1.0
750,993 + MPMX19_00729 0.29 -1.0
750,993 + MPMX19_00729 0.29 -0.6
750,993 + MPMX19_00729 0.29 -1.0
750,993 + MPMX19_00729 0.29 +0.2
750,994 - MPMX19_00729 0.29 -1.8
750,994 - MPMX19_00729 0.29 -0.4
750,994 - MPMX19_00729 0.29 -1.2
750,994 - MPMX19_00729 0.29 -0.5
750,994 - MPMX19_00729 0.29 -0.3
750,994 - MPMX19_00729 0.29 -1.7
750,994 - MPMX19_00729 0.29 -1.5
750,994 - MPMX19_00729 0.29 -1.1
751,014 + MPMX19_00729 0.30 -0.7
751,014 + MPMX19_00729 0.30 -1.5
751,014 + MPMX19_00729 0.30 -0.6
751,014 + MPMX19_00729 0.30 -0.6
751,014 + MPMX19_00729 0.30 -1.8
751,015 - MPMX19_00729 0.30 -2.0
751,015 - MPMX19_00729 0.30 +0.5
751,015 - MPMX19_00729 0.30 +0.8
751,015 - MPMX19_00729 0.30 -1.4
751,062 + MPMX19_00729 0.32 +0.8
751,062 + MPMX19_00729 0.32 -0.4
751,062 + MPMX19_00729 0.32 -0.8
751,062 + MPMX19_00729 0.32 +0.0
751,062 + MPMX19_00729 0.32 -1.1
751,062 + MPMX19_00729 0.32 -1.0
751,063 - MPMX19_00729 0.32 +0.2
751,063 - MPMX19_00729 0.32 -1.2
751,063 - MPMX19_00729 0.32 -0.2
751,063 - MPMX19_00729 0.32 -1.3
751,063 - MPMX19_00729 0.32 -1.1
751,063 - MPMX19_00729 0.32 -0.8
751,185 + MPMX19_00729 0.38 -0.6
751,185 + MPMX19_00729 0.38 -1.3
751,186 - MPMX19_00729 0.38 +0.5
751,186 - MPMX19_00729 0.38 -1.9

Or see this region's nucleotide sequence