Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00297 and MPMX19_00298 are separated by 322 nucleotides MPMX19_00298 and MPMX19_00299 are separated by 88 nucleotides
MPMX19_00297: MPMX19_00297 - 4-carboxy-4-hydroxy-2-oxoadipate aldolase, at 296,886 to 297,554
_00297
MPMX19_00298: MPMX19_00298 - hypothetical protein, at 297,877 to 298,935
_00298
MPMX19_00299: MPMX19_00299 - hypothetical protein, at 299,024 to 300,079
_00299
Position (kb) 297
298
299 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 296.914 kb on + strand at 296.914 kb on + strand at 296.914 kb on + strand at 296.914 kb on + strand at 296.914 kb on + strand at 296.914 kb on + strand at 296.914 kb on + strand at 296.915 kb on - strand at 296.915 kb on - strand at 296.915 kb on - strand at 296.971 kb on + strand, within MPMX19_00297 at 296.972 kb on - strand, within MPMX19_00297 at 297.353 kb on + strand, within MPMX19_00297 at 297.354 kb on - strand, within MPMX19_00297 at 297.626 kb on - strand at 297.760 kb on - strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.876 kb on + strand at 297.877 kb on - strand at 297.877 kb on - strand at 297.877 kb on - strand at 297.877 kb on - strand at 297.877 kb on - strand at 297.877 kb on - strand at 297.877 kb on - strand at 297.877 kb on - strand at 297.877 kb on - strand at 297.877 kb on - strand at 297.877 kb on - strand at 297.877 kb on - strand at 297.877 kb on - strand at 297.877 kb on - strand at 297.877 kb on - strand at 297.877 kb on - strand at 297.877 kb on - strand at 297.877 kb on - strand at 297.877 kb on - strand at 297.877 kb on - strand at 297.877 kb on - strand at 297.877 kb on - strand at 297.877 kb on - strand at 297.877 kb on - strand at 297.877 kb on - strand at 297.882 kb on + strand at 297.882 kb on + strand at 297.882 kb on + strand at 297.882 kb on + strand at 297.882 kb on + strand at 297.882 kb on + strand at 297.882 kb on + strand at 297.882 kb on + strand at 297.882 kb on + strand at 297.883 kb on - strand at 297.883 kb on - strand at 297.883 kb on - strand at 297.883 kb on - strand at 297.883 kb on - strand at 297.883 kb on - strand at 297.883 kb on - strand at 297.883 kb on - strand at 297.883 kb on - strand at 297.883 kb on - strand at 297.883 kb on - strand at 297.883 kb on - strand at 297.883 kb on - strand at 297.883 kb on - strand at 298.045 kb on + strand, within MPMX19_00298 at 298.079 kb on - strand, within MPMX19_00298 at 298.079 kb on - strand, within MPMX19_00298 at 298.079 kb on - strand, within MPMX19_00298 at 298.234 kb on + strand, within MPMX19_00298 at 298.234 kb on + strand, within MPMX19_00298 at 298.234 kb on + strand, within MPMX19_00298 at 298.234 kb on + strand, within MPMX19_00298 at 298.234 kb on + strand, within MPMX19_00298 at 298.234 kb on + strand, within MPMX19_00298 at 298.234 kb on + strand, within MPMX19_00298 at 298.324 kb on + strand, within MPMX19_00298 at 298.324 kb on + strand, within MPMX19_00298 at 298.324 kb on + strand, within MPMX19_00298 at 298.324 kb on + strand, within MPMX19_00298 at 298.324 kb on + strand, within MPMX19_00298 at 298.324 kb on + strand, within MPMX19_00298 at 298.325 kb on - strand, within MPMX19_00298 at 298.325 kb on - strand, within MPMX19_00298 at 298.325 kb on - strand, within MPMX19_00298 at 298.325 kb on - strand, within MPMX19_00298 at 298.325 kb on - strand, within MPMX19_00298 at 298.325 kb on - strand, within MPMX19_00298 at 298.325 kb on - strand, within MPMX19_00298 at 298.325 kb on - strand, within MPMX19_00298 at 298.325 kb on - strand, within MPMX19_00298 at 298.325 kb on - strand, within MPMX19_00298 at 298.831 kb on + strand at 298.831 kb on + strand at 298.831 kb on + strand at 298.831 kb on + strand at 298.831 kb on + strand at 298.831 kb on + strand at 298.831 kb on + strand at 298.831 kb on + strand at 298.832 kb on - strand at 298.832 kb on - strand at 298.832 kb on - strand at 298.832 kb on - strand at 298.832 kb on - strand at 298.832 kb on - strand at 298.832 kb on - strand at 298.864 kb on + strand at 298.864 kb on + strand at 298.864 kb on + strand at 298.864 kb on + strand at 298.865 kb on - strand at 298.865 kb on - strand at 298.865 kb on - strand at 299.000 kb on - strand at 299.000 kb on - strand at 299.000 kb on - strand at 299.025 kb on + strand at 299.025 kb on + strand at 299.025 kb on + strand at 299.025 kb on + strand at 299.025 kb on + strand at 299.025 kb on + strand at 299.025 kb on + strand at 299.025 kb on + strand at 299.025 kb on + strand at 299.025 kb on + strand at 299.025 kb on + strand at 299.025 kb on + strand at 299.025 kb on + strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.026 kb on - strand at 299.094 kb on + strand at 299.094 kb on + strand at 299.094 kb on + strand at 299.094 kb on + strand at 299.095 kb on - strand at 299.095 kb on - strand at 299.095 kb on - strand at 299.095 kb on - strand at 299.095 kb on - strand at 299.127 kb on + strand at 299.127 kb on + strand at 299.127 kb on + strand at 299.127 kb on + strand at 299.127 kb on + strand at 299.127 kb on + strand at 299.127 kb on + strand at 299.127 kb on + strand at 299.127 kb on + strand at 299.128 kb on - strand at 299.128 kb on - strand at 299.128 kb on - strand at 299.128 kb on - strand at 299.128 kb on - strand at 299.128 kb on - strand at 299.128 kb on - strand at 299.128 kb on - strand at 299.128 kb on - strand at 299.233 kb on + strand, within MPMX19_00299 at 299.233 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.355 kb on + strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.356 kb on - strand, within MPMX19_00299 at 299.634 kb on + strand, within MPMX19_00299 at 299.634 kb on + strand, within MPMX19_00299 at 299.634 kb on + strand, within MPMX19_00299 at 299.634 kb on + strand, within MPMX19_00299 at 299.634 kb on + strand, within MPMX19_00299 at 299.635 kb on - strand, within MPMX19_00299 at 299.635 kb on - strand, within MPMX19_00299 at 299.635 kb on - strand, within MPMX19_00299 at 299.635 kb on - strand, within MPMX19_00299 at 299.635 kb on - strand, within MPMX19_00299 at 299.635 kb on - strand, within MPMX19_00299 at 299.661 kb on + strand, within MPMX19_00299 at 299.662 kb on - strand, within MPMX19_00299 at 299.725 kb on - strand, within MPMX19_00299 at 299.725 kb on - strand, within MPMX19_00299 at 299.725 kb on - strand, within MPMX19_00299 at 299.725 kb on - strand, within MPMX19_00299 at 299.725 kb on - strand, within MPMX19_00299 at 299.725 kb on - strand, within MPMX19_00299 at 299.913 kb on + strand, within MPMX19_00299
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 296,914 + -0.3 296,914 + -0.3 296,914 + -1.4 296,914 + -0.8 296,914 + -0.3 296,914 + -0.6 296,914 + -0.3 296,915 - -1.0 296,915 - +0.3 296,915 - -0.3 296,971 + MPMX19_00297 0.13 -0.2 296,972 - MPMX19_00297 0.13 -0.3 297,353 + MPMX19_00297 0.70 -1.0 297,354 - MPMX19_00297 0.70 +0.3 297,626 - -1.1 297,760 - -0.3 297,876 + -0.6 297,876 + -1.9 297,876 + -2.0 297,876 + -0.7 297,876 + -0.2 297,876 + -0.5 297,876 + -1.4 297,876 + -0.3 297,876 + +1.7 297,876 + +0.7 297,876 + +0.7 297,876 + -1.6 297,876 + +1.2 297,876 + -1.0 297,876 + -0.5 297,876 + -0.6 297,876 + -2.0 297,876 + -0.2 297,876 + -0.8 297,876 + -0.6 297,876 + +0.1 297,876 + -0.9 297,876 + +0.0 297,876 + -0.1 297,876 + +0.3 297,876 + -0.7 297,876 + +0.6 297,876 + -0.6 297,876 + +0.4 297,876 + -1.3 297,876 + -0.4 297,877 - -0.9 297,877 - +0.4 297,877 - -0.8 297,877 - +1.0 297,877 - +0.7 297,877 - -0.8 297,877 - -0.6 297,877 - -0.2 297,877 - +0.4 297,877 - -0.6 297,877 - -1.2 297,877 - -1.4 297,877 - -1.0 297,877 - -0.4 297,877 - -0.4 297,877 - -0.2 297,877 - -1.3 297,877 - +0.1 297,877 - +0.1 297,877 - -1.0 297,877 - -0.7 297,877 - -2.0 297,877 - -1.3 297,877 - -2.7 297,877 - -0.2 297,882 + +0.1 297,882 + +2.4 297,882 + -1.0 297,882 + -0.8 297,882 + -1.2 297,882 + -1.2 297,882 + -2.1 297,882 + -1.0 297,882 + -1.2 297,883 - -0.9 297,883 - -1.2 297,883 - -0.4 297,883 - -0.8 297,883 - -0.3 297,883 - -0.6 297,883 - -1.2 297,883 - +0.1 297,883 - +0.8 297,883 - +0.3 297,883 - -0.8 297,883 - -1.2 297,883 - -1.3 297,883 - +0.2 298,045 + MPMX19_00298 0.16 -0.0 298,079 - MPMX19_00298 0.19 -0.5 298,079 - MPMX19_00298 0.19 -0.9 298,079 - MPMX19_00298 0.19 -1.5 298,234 + MPMX19_00298 0.34 -1.6 298,234 + MPMX19_00298 0.34 -0.4 298,234 + MPMX19_00298 0.34 -1.0 298,234 + MPMX19_00298 0.34 -0.8 298,234 + MPMX19_00298 0.34 +0.1 298,234 + MPMX19_00298 0.34 -1.5 298,234 + MPMX19_00298 0.34 -0.5 298,324 + MPMX19_00298 0.42 +0.0 298,324 + MPMX19_00298 0.42 +0.4 298,324 + MPMX19_00298 0.42 -0.2 298,324 + MPMX19_00298 0.42 -1.1 298,324 + MPMX19_00298 0.42 -1.8 298,324 + MPMX19_00298 0.42 +0.1 298,325 - MPMX19_00298 0.42 -1.0 298,325 - MPMX19_00298 0.42 -2.3 298,325 - MPMX19_00298 0.42 +0.1 298,325 - MPMX19_00298 0.42 -0.9 298,325 - MPMX19_00298 0.42 -0.6 298,325 - MPMX19_00298 0.42 -0.9 298,325 - MPMX19_00298 0.42 +0.3 298,325 - MPMX19_00298 0.42 -0.3 298,325 - MPMX19_00298 0.42 -2.6 298,325 - MPMX19_00298 0.42 -1.4 298,831 + -1.9 298,831 + -2.1 298,831 + +1.7 298,831 + -2.0 298,831 + +0.1 298,831 + -1.0 298,831 + -0.5 298,831 + +0.6 298,832 - -1.3 298,832 - +0.6 298,832 - -1.0 298,832 - -0.4 298,832 - +1.8 298,832 - -0.8 298,832 - -1.3 298,864 + -0.4 298,864 + -1.5 298,864 + -1.1 298,864 + -1.1 298,865 - +0.7 298,865 - -1.2 298,865 - +0.6 299,000 - -0.6 299,000 - -0.8 299,000 - -0.8 299,025 + -0.0 299,025 + -1.3 299,025 + -1.0 299,025 + -0.2 299,025 + -1.8 299,025 + -0.6 299,025 + -1.8 299,025 + +0.6 299,025 + -0.9 299,025 + -2.0 299,025 + -0.8 299,025 + +0.3 299,025 + -1.6 299,026 - -0.0 299,026 - -2.2 299,026 - -1.4 299,026 - -2.0 299,026 - -1.7 299,026 - -0.0 299,026 - +0.2 299,026 - -0.9 299,026 - -1.1 299,026 - -2.1 299,026 - -0.7 299,026 - +0.8 299,026 - +0.1 299,026 - -2.3 299,026 - -2.0 299,094 + -1.2 299,094 + +0.2 299,094 + -1.7 299,094 + -0.1 299,095 - -1.4 299,095 - -1.8 299,095 - -1.0 299,095 - -0.6 299,095 - -1.4 299,127 + -1.8 299,127 + +0.8 299,127 + +0.1 299,127 + -0.5 299,127 + -1.9 299,127 + -0.2 299,127 + -0.4 299,127 + +0.8 299,127 + -2.3 299,128 - -0.3 299,128 - +0.2 299,128 - -0.9 299,128 - -1.5 299,128 - -1.1 299,128 - -0.4 299,128 - -1.0 299,128 - -2.0 299,128 - -0.4 299,233 + MPMX19_00299 0.20 +0.5 299,233 + MPMX19_00299 0.20 -0.9 299,355 + MPMX19_00299 0.31 -0.5 299,355 + MPMX19_00299 0.31 -1.3 299,355 + MPMX19_00299 0.31 -0.1 299,355 + MPMX19_00299 0.31 -0.5 299,355 + MPMX19_00299 0.31 +0.8 299,355 + MPMX19_00299 0.31 -0.8 299,355 + MPMX19_00299 0.31 +0.2 299,355 + MPMX19_00299 0.31 +1.0 299,355 + MPMX19_00299 0.31 -0.3 299,355 + MPMX19_00299 0.31 -0.3 299,355 + MPMX19_00299 0.31 -0.6 299,355 + MPMX19_00299 0.31 -1.0 299,355 + MPMX19_00299 0.31 -0.6 299,355 + MPMX19_00299 0.31 +0.1 299,355 + MPMX19_00299 0.31 -0.7 299,355 + MPMX19_00299 0.31 -0.0 299,355 + MPMX19_00299 0.31 +0.4 299,355 + MPMX19_00299 0.31 -0.4 299,355 + MPMX19_00299 0.31 -1.3 299,355 + MPMX19_00299 0.31 +0.5 299,355 + MPMX19_00299 0.31 -1.9 299,355 + MPMX19_00299 0.31 -0.3 299,355 + MPMX19_00299 0.31 -0.9 299,356 - MPMX19_00299 0.31 +0.8 299,356 - MPMX19_00299 0.31 -1.2 299,356 - MPMX19_00299 0.31 -1.9 299,356 - MPMX19_00299 0.31 -1.2 299,356 - MPMX19_00299 0.31 -0.9 299,356 - MPMX19_00299 0.31 -0.0 299,356 - MPMX19_00299 0.31 -1.9 299,356 - MPMX19_00299 0.31 -1.0 299,356 - MPMX19_00299 0.31 -1.7 299,356 - MPMX19_00299 0.31 -1.9 299,356 - MPMX19_00299 0.31 -2.8 299,356 - MPMX19_00299 0.31 -3.4 299,356 - MPMX19_00299 0.31 -1.0 299,634 + MPMX19_00299 0.58 +0.1 299,634 + MPMX19_00299 0.58 -0.6 299,634 + MPMX19_00299 0.58 +0.1 299,634 + MPMX19_00299 0.58 +0.2 299,634 + MPMX19_00299 0.58 +0.1 299,635 - MPMX19_00299 0.58 -0.6 299,635 - MPMX19_00299 0.58 -0.0 299,635 - MPMX19_00299 0.58 -0.7 299,635 - MPMX19_00299 0.58 -1.5 299,635 - MPMX19_00299 0.58 -1.7 299,635 - MPMX19_00299 0.58 -0.2 299,661 + MPMX19_00299 0.60 -0.0 299,662 - MPMX19_00299 0.60 +0.2 299,725 - MPMX19_00299 0.66 -1.5 299,725 - MPMX19_00299 0.66 -0.4 299,725 - MPMX19_00299 0.66 -0.8 299,725 - MPMX19_00299 0.66 -1.0 299,725 - MPMX19_00299 0.66 +0.2 299,725 - MPMX19_00299 0.66 -2.0 299,913 + MPMX19_00299 0.84 -0.5
Or see this region's nucleotide sequence